RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 TMEM266Q2M3C6 531 aa9.27□□□□□ -0.93
BRCA1-208ENST00000468300 CNNM4Q6P4Q7 775 aa9.27□□□□□ -0.93
BRCA1-208ENST00000468300 SNX29Q8TEQ0 813 aa9.27□□□□□ -0.93
BRCA1-208ENST00000468300 RAD54LQ92698 747 aa9.27□□□□□ -0.93
BRCA1-208ENST00000468300 SMARCE1Q969G3 411 aa9.27□□□□□ -0.93
BRCA1-208ENST00000468300 GSDMAQ96QA5 445 aa9.27□□□□□ -0.93
BRCA1-208ENST00000468300 C7orf25Q9BPX7 421 aa9.27□□□□□ -0.93
BRCA1-208ENST00000468300 TRIM9Q9C026 710 aa9.27□□□□□ -0.93
BRCA1-208ENST00000468300 UNC45AQ9H3U1 944 aa9.27□□□□□ -0.93
BRCA1-208ENST00000468300 CUEDC2Q9H467 287 aa9.27□□□□□ -0.93
BRCA1-208ENST00000468300 BCAS3Q9H6U6 928 aa9.27□□□□□ -0.93
BRCA1-208ENST00000468300 AGO4Q9HCK5 861 aaKnown RBP9.27□□□□□ -0.93
BRCA1-208ENST00000468300 POTEB3A0JP26 581 aa9.27□□□□□ -0.93
BRCA1-208ENST00000468300 MYMKA6NI61 221 aa9.27□□□□□ -0.93
BRCA1-208ENST00000468300 MCM6Q14566 821 aa9.27□□□□□ -0.93
BRCA1-208ENST00000468300 PLS1Q14651 629 aa9.27□□□□□ -0.93
BRCA1-208ENST00000468300 CHADLQ6NUI6 762 aa9.27□□□□□ -0.93
BRCA1-208ENST00000468300 POTEBQ6S5H4 581 aa9.27□□□□□ -0.93
BRCA1-208ENST00000468300 FAM43AQ8N2R8 423 aa9.27□□□□□ -0.93
BRCA1-208ENST00000468300 TRIML1Q8N9V2 468 aa9.27□□□□□ -0.93
BRCA1-208ENST00000468300 CHST13Q8NET6 341 aa9.27□□□□□ -0.93
BRCA1-208ENST00000468300 GPBP1L1Q9HC44 474 aaPredicted RBP9.27□□□□□ -0.93
BRCA1-208ENST00000468300 PLXNA1Q9UIW2 1896 aa9.27□□□□□ -0.93
BRCA1-208ENST00000468300 RABGAP1Q9Y3P9 1069 aa9.27□□□□□ -0.93
BRCA1-208ENST00000468300 TELO2Q9Y4R8 837 aa9.27□□□□□ -0.93
BRCA1-208ENST00000468300 TESPA1A2RU30 521 aaPredicted RBP9.26□□□□□ -0.93
BRCA1-208ENST00000468300 SOWAHBA6NEL2 793 aa9.26□□□□□ -0.93
BRCA1-208ENST00000468300 CAVIN2O95810 425 aa9.26□□□□□ -0.93
BRCA1-208ENST00000468300 TXLNAP40222 546 aa9.26□□□□□ -0.93
BRCA1-208ENST00000468300 EHHADHQ08426 723 aa9.26□□□□□ -0.93
BRCA1-208ENST00000468300 MKRN3Q13064 507 aaKnown RBP9.26□□□□□ -0.93
BRCA1-208ENST00000468300 SMYD4Q8IYR2 804 aaPredicted RBP9.26□□□□□ -0.93
BRCA1-208ENST00000468300 CCDC39Q9UFE4 941 aa9.26□□□□□ -0.93
BRCA1-208ENST00000468300 ZHX1Q9UKY1 873 aaPredicted RBP9.26□□□□□ -0.93
BRCA1-208ENST00000468300 SLC45A1Q9Y2W3 748 aa9.26□□□□□ -0.93
BRCA1-208ENST00000468300 DNAJC25-GNG10A0A024R161 153 aa9.26□□□□□ -0.93
BRCA1-208ENST00000468300 TTC36A6NLP5 189 aa9.26□□□□□ -0.93
BRCA1-208ENST00000468300 E9PMD0 336 aa9.26□□□□□ -0.93
BRCA1-208ENST00000468300 SLITRK3O94933 977 aa9.26□□□□□ -0.93
BRCA1-208ENST00000468300 RPN1P04843 607 aaKnown RBP9.26□□□□□ -0.93
BRCA1-208ENST00000468300 RPA1P27694 616 aa9.26□□□□□ -0.93
BRCA1-208ENST00000468300 SLC12A3P55017 1021 aa9.26□□□□□ -0.93
BRCA1-208ENST00000468300 ARSHQ5FYA8 562 aa9.26□□□□□ -0.93
BRCA1-208ENST00000468300 AOPEPQ8N6M6 819 aa9.26□□□□□ -0.93
BRCA1-208ENST00000468300 DNAJC19Q96DA6 116 aa9.26□□□□□ -0.93
BRCA1-208ENST00000468300 INPP4AQ96PE3 977 aaPredicted RBP9.26□□□□□ -0.93
BRCA1-208ENST00000468300 MAGEF1Q9HAY2 307 aa9.26□□□□□ -0.93
BRCA1-208ENST00000468300 STK17AQ9UEE5 414 aa9.26□□□□□ -0.93
BRCA1-208ENST00000468300 POTEFA5A3E0 1075 aa9.25□□□□□ -0.93
BRCA1-208ENST00000468300 PDHXO00330 501 aa9.25□□□□□ -0.93
BRCA1-208ENST00000468300 IPO5O00410 1097 aaKnown RBP9.25□□□□□ -0.93
BRCA1-208ENST00000468300 SLC26A4O43511 780 aa9.25□□□□□ -0.93
BRCA1-208ENST00000468300 NR3C2P08235 984 aa9.25□□□□□ -0.93
BRCA1-208ENST00000468300 ERCC3P19447 782 aa9.25□□□□□ -0.93
BRCA1-208ENST00000468300 EDNRBP24530 442 aa9.25□□□□□ -0.93
BRCA1-208ENST00000468300 ZNF76P36508 570 aa9.25□□□□□ -0.93
BRCA1-208ENST00000468300 ZRSR1Q15695 479 aaKnown RBP9.25□□□□□ -0.93
BRCA1-208ENST00000468300 KMT5BQ4FZB7 885 aa9.25□□□□□ -0.93
BRCA1-208ENST00000468300 KRT79Q5XKE5 535 aa9.25□□□□□ -0.93
BRCA1-208ENST00000468300 POTEGQ6S5H5 508 aa9.25□□□□□ -0.93
BRCA1-208ENST00000468300 C2orf69Q8N8R5 385 aa9.25□□□□□ -0.93
BRCA1-208ENST00000468300 EIF2AK1Q9BQI3 630 aaKnown RBP9.25□□□□□ -0.93
BRCA1-208ENST00000468300 ZNF577Q9BSK1 485 aa9.25□□□□□ -0.93
BRCA1-208ENST00000468300 EHMT1Q9H9B1 1298 aa9.25□□□□□ -0.93
BRCA1-208ENST00000468300 RGL1Q9NZL6 768 aa9.25□□□□□ -0.93
BRCA1-208ENST00000468300 CTDP1Q9Y5B0 961 aaPredicted RBP9.25□□□□□ -0.93
BRCA1-208ENST00000468300 KIF3CO14782 793 aa9.25□□□□□ -0.93
BRCA1-208ENST00000468300 RHOBTB3O94955 611 aa9.25□□□□□ -0.93
BRCA1-208ENST00000468300 ZBTB48P10074 688 aaPredicted RBP9.25□□□□□ -0.93
BRCA1-208ENST00000468300 GTF2A2P52657 109 aa9.25□□□□□ -0.93
BRCA1-208ENST00000468300 LRCH2Q5VUJ6 765 aa9.25□□□□□ -0.93
BRCA1-208ENST00000468300 ARHGEF16Q5VV41 709 aa9.25□□□□□ -0.93
BRCA1-208ENST00000468300 NCAPH2Q6IBW4 605 aa9.25□□□□□ -0.93
BRCA1-208ENST00000468300 ANKRD23Q86SG2 305 aa9.25□□□□□ -0.93
BRCA1-208ENST00000468300 RASAL3Q86YV0 1011 aa9.25□□□□□ -0.93
BRCA1-208ENST00000468300 FAM133AQ8N9E0 248 aa9.25□□□□□ -0.93
BRCA1-208ENST00000468300 LARP4BQ92615 738 aaKnown RBP9.25□□□□□ -0.93
BRCA1-208ENST00000468300 RIT2Q99578 217 aa9.25□□□□□ -0.93
BRCA1-208ENST00000468300 POLR3CQ9BUI4 534 aaPredicted RBP9.25□□□□□ -0.93
BRCA1-208ENST00000468300 RAB34Q9BZG1 259 aa9.25□□□□□ -0.93
BRCA1-208ENST00000468300 HOOK1Q9UJC3 728 aaKnown RBP9.25□□□□□ -0.93
BRCA1-208ENST00000468300 KIAA1024Q9UPX6 916 aa9.25□□□□□ -0.93
BRCA1-208ENST00000468300 FAM155AB1AL88 458 aaPredicted RBP9.25□□□□□ -0.93
BRCA1-208ENST00000468300 ZBTB39O15060 712 aa9.25□□□□□ -0.93
BRCA1-208ENST00000468300 MARCH6O60337 910 aa9.25□□□□□ -0.93
BRCA1-208ENST00000468300 CCNE2O96020 404 aa9.25□□□□□ -0.93
BRCA1-208ENST00000468300 MYL1P05976 194 aa9.25□□□□□ -0.93
BRCA1-208ENST00000468300 CETPP11597 493 aa9.25□□□□□ -0.93
BRCA1-208ENST00000468300 CCT6AP40227 531 aaKnown RBP9.25□□□□□ -0.93
BRCA1-208ENST00000468300 SP2Q02086 613 aa9.25□□□□□ -0.93
BRCA1-208ENST00000468300 KCNB1Q14721 858 aa9.25□□□□□ -0.93
BRCA1-208ENST00000468300 SAPCD2Q86UD0 394 aa9.25□□□□□ -0.93
BRCA1-208ENST00000468300 CALML4Q96GE6 196 aa9.25□□□□□ -0.93
BRCA1-208ENST00000468300 PORCNQ9H237 461 aa9.25□□□□□ -0.93
BRCA1-208ENST00000468300 GDAQ9Y2T3 454 aa9.25□□□□□ -0.93
BRCA1-208ENST00000468300 ADGRA2Q96PE1 1338 aa9.25□□□□□ -0.93
BRCA1-208ENST00000468300 ARID2Q68CP9 1835 aa9.24□□□□□ -0.93
BRCA1-208ENST00000468300 LOXHD1Q8IVV2 1947 aa9.24□□□□□ -0.93
BRCA1-208ENST00000468300 CCL15-CCL14A0A0B4J2E2 113 aa9.24□□□□□ -0.93
BRCA1-208ENST00000468300 IKBKBO14920 756 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms