RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 PPP2R3AQ06190 1150 aa12.69□□□□□ -0.38
HPS1-208ENST00000467246 CXCL9Q07325 125 aa12.69□□□□□ -0.38
HPS1-208ENST00000467246 MEA1Q16626 185 aa12.69□□□□□ -0.38
HPS1-208ENST00000467246 ZCWPW2Q504Y3 356 aa12.69□□□□□ -0.38
HPS1-208ENST00000467246 HERC4Q5GLZ8 1057 aaPredicted RBP12.69□□□□□ -0.38
HPS1-208ENST00000467246 NELFCDQ8IXH7 590 aa12.69□□□□□ -0.38
HPS1-208ENST00000467246 SLC35F6Q8N357 371 aa12.69□□□□□ -0.38
HPS1-208ENST00000467246 RETREG2Q8NC44 543 aa12.69□□□□□ -0.38
HPS1-208ENST00000467246 ZBTB9Q96C00 473 aa12.69□□□□□ -0.38
HPS1-208ENST00000467246 EPC1Q9H2F5 836 aa12.69□□□□□ -0.38
HPS1-208ENST00000467246 PSME4Q14997 1843 aa12.69□□□□□ -0.38
HPS1-208ENST00000467246 PIK3CDO00329 1044 aa12.69□□□□□ -0.38
HPS1-208ENST00000467246 EPHB6O15197 1021 aa12.69□□□□□ -0.38
HPS1-208ENST00000467246 ZBED6P86452 979 aa12.69□□□□□ -0.38
HPS1-208ENST00000467246 PABPC4Q13310 644 aaKnown RBP eCLIP12.69□□□□□ -0.382e-7■■□□□ 14.5
HPS1-208ENST00000467246 HAUS3Q68CZ6 603 aa12.69□□□□□ -0.38
HPS1-208ENST00000467246 CCDC65Q8IXS2 484 aa12.69□□□□□ -0.38
HPS1-208ENST00000467246 NIM1KQ8IY84 436 aa12.69□□□□□ -0.38
HPS1-208ENST00000467246 ZHX3Q9H4I2 956 aa12.69□□□□□ -0.38
HPS1-208ENST00000467246 FBXO28Q9NVF7 368 aa12.69□□□□□ -0.38
HPS1-208ENST00000467246 EFCAB8A8MWE9 144 aa12.68□□□□□ -0.38
HPS1-208ENST00000467246 FGFR1OPO95684 399 aaKnown RBP12.68□□□□□ -0.38
HPS1-208ENST00000467246 KRT18P05783 430 aaKnown RBP12.68□□□□□ -0.38
HPS1-208ENST00000467246 RPA1P27694 616 aa12.68□□□□□ -0.38
HPS1-208ENST00000467246 UBXN2AP68543 259 aa12.68□□□□□ -0.38
HPS1-208ENST00000467246 CYP4A11Q02928 519 aa12.68□□□□□ -0.38
HPS1-208ENST00000467246 MAN2A1Q16706 1144 aa12.68□□□□□ -0.38
HPS1-208ENST00000467246 ZFP91Q96JP5 570 aaPredicted RBP12.68□□□□□ -0.38
HPS1-208ENST00000467246 FAM20AQ96MK3 541 aa12.68□□□□□ -0.38
HPS1-208ENST00000467246 TSG101Q99816 390 aa12.68□□□□□ -0.38
HPS1-208ENST00000467246 FAM207AQ9NSI2 230 aaPredicted RBP12.68□□□□□ -0.38
HPS1-208ENST00000467246 VAV3Q9UKW4 847 aa12.68□□□□□ -0.38
HPS1-208ENST00000467246 SIK3Q9Y2K2 1263 aa12.68□□□□□ -0.38
HPS1-208ENST00000467246 IGLV3-22A0A075B6J6 115 aa12.68□□□□□ -0.38
HPS1-208ENST00000467246 TRAF5O00463 557 aa12.68□□□□□ -0.38
HPS1-208ENST00000467246 WNT10BO00744 389 aa12.68□□□□□ -0.38
HPS1-208ENST00000467246 KIF20AO95235 890 aa12.68□□□□□ -0.38
HPS1-208ENST00000467246 CAP2P40123 477 aa12.68□□□□□ -0.38
HPS1-208ENST00000467246 HERVK_113P62684 666 aa12.68□□□□□ -0.38
HPS1-208ENST00000467246 PDE4CQ08493 712 aa12.68□□□□□ -0.38
HPS1-208ENST00000467246 CCDC155Q8N6L0 562 aa12.68□□□□□ -0.38
HPS1-208ENST00000467246 SCFD1Q8WVM8 642 aa12.68□□□□□ -0.38
HPS1-208ENST00000467246 VCPKMTQ9H867 229 aa12.68□□□□□ -0.38
HPS1-208ENST00000467246 POLD4Q9HCU8 107 aa12.68□□□□□ -0.38
HPS1-208ENST00000467246 EML1O00423 815 aa12.67□□□□□ -0.38
HPS1-208ENST00000467246 CYP3A4P08684 503 aa12.67□□□□□ -0.38
HPS1-208ENST00000467246 H2AFXP16104 143 aaPredicted RBP12.67□□□□□ -0.38
HPS1-208ENST00000467246 FKBP1CQ5VVH2 108 aa12.67□□□□□ -0.38
HPS1-208ENST00000467246 AGBL3Q8NEM8 1001 aa12.67□□□□□ -0.38
HPS1-208ENST00000467246 ERMNQ8TAM6 284 aa12.67□□□□□ -0.38
HPS1-208ENST00000467246 WDR18Q9BV38 432 aa12.67□□□□□ -0.38
HPS1-208ENST00000467246 MMRN2Q9H8L6 949 aa12.67□□□□□ -0.38
HPS1-208ENST00000467246 NHEJ1Q9H9Q4 299 aaPredicted RBP12.67□□□□□ -0.38
HPS1-208ENST00000467246 RGL1Q9NZL6 768 aa12.67□□□□□ -0.38
HPS1-208ENST00000467246 PGAP2Q9UHJ9 254 aa12.67□□□□□ -0.38
HPS1-208ENST00000467246 GUCA1BQ9UMX6 200 aa12.67□□□□□ -0.38
HPS1-208ENST00000467246 DNM3Q9UQ16 869 aa12.67□□□□□ -0.38
HPS1-208ENST00000467246 TBC1D12O60347 775 aa12.67□□□□□ -0.38
HPS1-208ENST00000467246 TFRCP02786 760 aaKnown RBP12.67□□□□□ -0.38
HPS1-208ENST00000467246 FKBP3Q00688 224 aaKnown RBP12.67□□□□□ -0.38
HPS1-208ENST00000467246 KIF4BQ2VIQ3 1234 aa12.67□□□□□ -0.38
HPS1-208ENST00000467246 FIGNQ5HY92 759 aa12.67□□□□□ -0.38
HPS1-208ENST00000467246 MTMR14Q8NCE2 650 aa12.67□□□□□ -0.38
HPS1-208ENST00000467246 CHURC1Q8WUH1 139 aa12.67□□□□□ -0.38
HPS1-208ENST00000467246 RANBP17Q9H2T7 1088 aaKnown RBP12.67□□□□□ -0.38
HPS1-208ENST00000467246 EMILIN3Q9NT22 766 aa12.67□□□□□ -0.38
HPS1-208ENST00000467246 ZNHIT6Q9NWK9 470 aaKnown RBP12.67□□□□□ -0.38
HPS1-208ENST00000467246 ZNF446Q9NWS9 450 aa12.67□□□□□ -0.38
HPS1-208ENST00000467246 A0A1W2PQJ5 194 aa12.66□□□□□ -0.38
HPS1-208ENST00000467246 FRMD3A2A2Y4 597 aa12.66□□□□□ -0.38
HPS1-208ENST00000467246 SLC26A4O43511 780 aa12.66□□□□□ -0.38
HPS1-208ENST00000467246 BAG6P46379 1132 aa12.66□□□□□ -0.38
HPS1-208ENST00000467246 CASP5P51878 434 aa12.66□□□□□ -0.38
HPS1-208ENST00000467246 GIT2Q14161 759 aa12.66□□□□□ -0.38
HPS1-208ENST00000467246 FAM83AQ86UY5 434 aa12.66□□□□□ -0.38
HPS1-208ENST00000467246 GPIHBP1Q8IV16 184 aa12.66□□□□□ -0.38
HPS1-208ENST00000467246 SYT2Q8N9I0 419 aaPredicted RBP12.66□□□□□ -0.38
HPS1-208ENST00000467246 BCAS3Q9H6U6 928 aa12.66□□□□□ -0.38
HPS1-208ENST00000467246 ZSWIM4Q9H7M6 989 aa12.66□□□□□ -0.38
HPS1-208ENST00000467246 CTAGE9A4FU28 777 aa12.66□□□□□ -0.38
HPS1-208ENST00000467246 GCOM1H8Y6P7 765 aaPredicted RBP12.66□□□□□ -0.38
HPS1-208ENST00000467246 PLEKP08567 350 aaPredicted RBP12.66□□□□□ -0.38
HPS1-208ENST00000467246 POLR2MP0CAP2 368 aa12.66□□□□□ -0.38
HPS1-208ENST00000467246 HOXA7P31268 230 aaPredicted RBP12.66□□□□□ -0.38
HPS1-208ENST00000467246 FOXR2Q6PJQ5 311 aa12.66□□□□□ -0.38
HPS1-208ENST00000467246 SMCR8Q8TEV9 937 aaPredicted RBP12.66□□□□□ -0.38
HPS1-208ENST00000467246 ZBED3Q96IU2 234 aaPredicted RBP12.66□□□□□ -0.38
HPS1-208ENST00000467246 EIF2AK1Q9BQI3 630 aaKnown RBP12.66□□□□□ -0.38
HPS1-208ENST00000467246 REEP2Q9BRK0 252 aa12.66□□□□□ -0.38
HPS1-208ENST00000467246 TANGO6Q9C0B7 1094 aa12.66□□□□□ -0.38
HPS1-208ENST00000467246 KCTD10Q9H3F6 313 aa12.66□□□□□ -0.38
HPS1-208ENST00000467246 DDX41Q9UJV9 622 aaKnown RBP12.66□□□□□ -0.38
HPS1-208ENST00000467246 COL4A3BPQ9Y5P4 624 aa12.66□□□□□ -0.38
HPS1-208ENST00000467246 ABCB11O95342 1321 aa12.66□□□□□ -0.38
HPS1-208ENST00000467246 RCCD1A6NED2 376 aa12.65□□□□□ -0.38
HPS1-208ENST00000467246 EGFRP00533 1210 aa12.65□□□□□ -0.38
HPS1-208ENST00000467246 CLCN6P51797 869 aa12.65□□□□□ -0.38
HPS1-208ENST00000467246 SF3B2Q13435 895 aaKnown RBP12.65□□□□□ -0.38
HPS1-208ENST00000467246 TEX35Q5T0J7 233 aa12.65□□□□□ -0.38
HPS1-208ENST00000467246 FEZ1Q99689 392 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms