RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 OGFRQ9NZT2 677 aa13.95□□□□□ -0.18
NUP58-206ENST00000463407 PPP2R2CQ9Y2T4 447 aa13.95□□□□□ -0.18
NUP58-206ENST00000463407 DENND3A2RUS2 1198 aa13.95□□□□□ -0.18
NUP58-206ENST00000463407 LARGE1O95461 756 aa13.95□□□□□ -0.18
NUP58-206ENST00000463407 NECTIN1Q15223 517 aa13.95□□□□□ -0.18
NUP58-206ENST00000463407 FAM84BQ96KN1 310 aaPredicted RBP13.95□□□□□ -0.18
NUP58-206ENST00000463407 INPP5FQ9Y2H2 1132 aa13.95□□□□□ -0.18
NUP58-206ENST00000463407 PCDHA5Q9Y5H7 936 aa13.95□□□□□ -0.18
NUP58-206ENST00000463407 ZBBXA8MT70 800 aa13.95□□□□□ -0.18
NUP58-206ENST00000463407 MED7O43513 233 aa13.95□□□□□ -0.18
NUP58-206ENST00000463407 CD2BP2O95400 341 aaKnown RBP13.95□□□□□ -0.18
NUP58-206ENST00000463407 PLCG1P19174 1290 aa13.95□□□□□ -0.18
NUP58-206ENST00000463407 NT5C2P49902 561 aa13.95□□□□□ -0.18
NUP58-206ENST00000463407 TBC1D10CQ8IV04 446 aa13.95□□□□□ -0.18
NUP58-206ENST00000463407 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.95□□□□□ -0.18
NUP58-206ENST00000463407 TIGD1Q96MW7 591 aa13.95□□□□□ -0.18
NUP58-206ENST00000463407 RPAP3Q9H6T3 665 aaPredicted RBP13.95□□□□□ -0.18
NUP58-206ENST00000463407 POLIQ9UNA4 740 aa13.95□□□□□ -0.18
NUP58-206ENST00000463407 SETBP1Q9Y6X0 1596 aa13.95□□□□□ -0.18
NUP58-206ENST00000463407 H7C0C1 242 aa13.95□□□□□ -0.18
NUP58-206ENST00000463407 ATP5OP48047 213 aa13.95□□□□□ -0.18
NUP58-206ENST00000463407 MTMR3Q13615 1198 aa13.95□□□□□ -0.18
NUP58-206ENST00000463407 TTBK2Q6IQ55 1244 aa13.95□□□□□ -0.18
NUP58-206ENST00000463407 PRR5LQ6MZQ0 368 aa13.95□□□□□ -0.18
NUP58-206ENST00000463407 MAP7D3Q8IWC1 876 aa13.95□□□□□ -0.18
NUP58-206ENST00000463407 LRRC4Q9HBW1 653 aa13.95□□□□□ -0.18
NUP58-206ENST00000463407 KRIT1O00522 736 aa13.95□□□□□ -0.18
NUP58-206ENST00000463407 PEX3P56589 373 aa13.95□□□□□ -0.18
NUP58-206ENST00000463407 FOXO4P98177 505 aa13.95□□□□□ -0.18
NUP58-206ENST00000463407 SURF1Q15526 300 aa13.95□□□□□ -0.18
NUP58-206ENST00000463407 SCARA5Q6ZMJ2 495 aa13.95□□□□□ -0.18
NUP58-206ENST00000463407 BBS5Q8N3I7 341 aa13.95□□□□□ -0.18
NUP58-206ENST00000463407 MARCH10Q8NA82 808 aaPredicted RBP13.95□□□□□ -0.18
NUP58-206ENST00000463407 CPVLQ9H3G5 476 aa13.95□□□□□ -0.18
NUP58-206ENST00000463407 PLCB1Q9NQ66 1216 aa13.95□□□□□ -0.18
NUP58-206ENST00000463407 HYOU1Q9Y4L1 999 aa13.95□□□□□ -0.18
NUP58-206ENST00000463407 GOLGA8IPA6NC78 632 aa13.94□□□□□ -0.18
NUP58-206ENST00000463407 GOLGA8JA6NMD2 632 aa13.94□□□□□ -0.18
NUP58-206ENST00000463407 PFDN6O15212 129 aa13.94□□□□□ -0.18
NUP58-206ENST00000463407 ZNF157P51786 506 aaPredicted RBP13.94□□□□□ -0.18
NUP58-206ENST00000463407 BARGINQ6ZT62 677 aa13.94□□□□□ -0.18
NUP58-206ENST00000463407 FAM167AQ96KS9 214 aa13.94□□□□□ -0.18
NUP58-206ENST00000463407 HEXIM2Q96MH2 286 aaKnown RBP13.94□□□□□ -0.18
NUP58-206ENST00000463407 EMILIN3Q9NT22 766 aa13.94□□□□□ -0.18
NUP58-206ENST00000463407 MAN1B1Q9UKM7 699 aa13.94□□□□□ -0.18
NUP58-206ENST00000463407 PCDHB6Q9Y5E3 794 aa13.94□□□□□ -0.18
NUP58-206ENST00000463407 ZNF233A6NK53 670 aa13.94□□□□□ -0.18
NUP58-206ENST00000463407 CD58P19256 250 aa13.94□□□□□ -0.18
NUP58-206ENST00000463407 EZH2Q15910 746 aaKnown RBP13.94□□□□□ -0.18
NUP58-206ENST00000463407 ADAT2Q7Z6V5 191 aaKnown RBP13.94□□□□□ -0.18
NUP58-206ENST00000463407 NBPF26B4DH59 902 aa13.94□□□□□ -0.18
NUP58-206ENST00000463407 H2AFZP0C0S5 128 aa13.94□□□□□ -0.18
NUP58-206ENST00000463407 LMNB1P20700 586 aa13.94□□□□□ -0.18
NUP58-206ENST00000463407 NBPF10Q6P3W6 841 aaKnown RBP13.94□□□□□ -0.18
NUP58-206ENST00000463407 H2AFVQ71UI9 128 aa13.94□□□□□ -0.18
NUP58-206ENST00000463407 MICALL1Q8N3F8 863 aa13.94□□□□□ -0.18
NUP58-206ENST00000463407 NBPF15Q8N660 670 aa13.94□□□□□ -0.18
NUP58-206ENST00000463407 SKA2Q8WVK7 121 aaPredicted RBP13.94□□□□□ -0.18
NUP58-206ENST00000463407 ATP6V0A4Q9HBG4 840 aa13.94□□□□□ -0.18
NUP58-206ENST00000463407 USP31Q70CQ4 1352 aa13.94□□□□□ -0.18
NUP58-206ENST00000463407 RUFY4Q6ZNE9 571 aa13.94□□□□□ -0.18
NUP58-206ENST00000463407 TMTC3Q6ZXV5 915 aa13.94□□□□□ -0.18
NUP58-206ENST00000463407 CROCCP2Q86T23 111 aa13.94□□□□□ -0.18
NUP58-206ENST00000463407 LINC00301Q8NCQ3 95 aa13.94□□□□□ -0.18
NUP58-206ENST00000463407 CPSF3Q9UKF6 684 aaKnown RBP13.94□□□□□ -0.18
NUP58-206ENST00000463407 SPATA31A5Q5VU36 1347 aa13.94□□□□□ -0.18
NUP58-206ENST00000463407 SPATA31A7Q8IWB4 1347 aa13.94□□□□□ -0.18
NUP58-206ENST00000463407 USP17L15C9J2P7 530 aa13.94□□□□□ -0.18
NUP58-206ENST00000463407 USP17L13C9JLJ4 530 aa13.94□□□□□ -0.18
NUP58-206ENST00000463407 USP17L11C9JVI0 530 aa13.94□□□□□ -0.18
NUP58-206ENST00000463407 USP17L18D6R9N7 530 aa13.94□□□□□ -0.18
NUP58-206ENST00000463407 USP17L22D6RA61 530 aa13.94□□□□□ -0.18
NUP58-206ENST00000463407 USP17L17D6RBQ6 530 aa13.94□□□□□ -0.18
NUP58-206ENST00000463407 USP17L19D6RCP7 530 aa13.94□□□□□ -0.18
NUP58-206ENST00000463407 USP17L20D6RJB6 530 aa13.94□□□□□ -0.18
NUP58-206ENST00000463407 GOLGA8SH3BPF8 625 aa13.94□□□□□ -0.18
NUP58-206ENST00000463407 VPS41P49754 854 aa13.94□□□□□ -0.18
NUP58-206ENST00000463407 USP17L24Q0WX57 530 aa13.94□□□□□ -0.18
NUP58-206ENST00000463407 DENND2CQ68D51 928 aa13.94□□□□□ -0.18
NUP58-206ENST00000463407 SIX6OS1Q8N1H7 587 aa13.94□□□□□ -0.18
NUP58-206ENST00000463407 PIGOQ8TEQ8 1089 aa13.94□□□□□ -0.18
NUP58-206ENST00000463407 ATP2A3Q93084 1043 aa13.94□□□□□ -0.18
NUP58-206ENST00000463407 AIFM3Q96NN9 605 aa13.94□□□□□ -0.18
NUP58-206ENST00000463407 SFI1A8K8P3 1242 aa13.93□□□□□ -0.18
NUP58-206ENST00000463407 STK25O00506 426 aa13.93□□□□□ -0.18
NUP58-206ENST00000463407 UBE2TQ9NPD8 197 aaPredicted RBP13.93□□□□□ -0.18
NUP58-206ENST00000463407 ZNF302Q9NR11 478 aa13.93□□□□□ -0.18
NUP58-206ENST00000463407 NOC2LQ9Y3T9 749 aaKnown RBP13.93□□□□□ -0.18
NUP58-206ENST00000463407 LRRN2O75325 713 aa13.93□□□□□ -0.18
NUP58-206ENST00000463407 PRELPP51888 382 aa13.93□□□□□ -0.18
NUP58-206ENST00000463407 PPARDQ03181 441 aa13.93□□□□□ -0.18
NUP58-206ENST00000463407 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.93□□□□□ -0.18
NUP58-206ENST00000463407 KCNH4Q9UQ05 1017 aa13.93□□□□□ -0.18
NUP58-206ENST00000463407 BCORL1Q5H9F3 1711 aa13.93□□□□□ -0.18
NUP58-206ENST00000463407 LRRC7Q96NW7 1537 aa13.93□□□□□ -0.18
NUP58-206ENST00000463407 I3L4J1 428 aa13.93□□□□□ -0.18
NUP58-206ENST00000463407 MNAT1P51948 309 aa13.93□□□□□ -0.18
NUP58-206ENST00000463407 WHAMMP3Q1A5X7 153 aa13.93□□□□□ -0.18
NUP58-206ENST00000463407 LRRC8AQ8IWT6 810 aa13.93□□□□□ -0.18
NUP58-206ENST00000463407 FAM81BQ96LP2 452 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms