RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 GCOM1H8Y6P7 765 aaPredicted RBP15.71■□□□□ 0.11
ERCC3-205ENST00000460485 MFAP3LO75121 409 aa15.71■□□□□ 0.11
ERCC3-205ENST00000460485 POLR2MP0CAP2 368 aa15.71■□□□□ 0.11
ERCC3-205ENST00000460485 CCT6AP40227 531 aaKnown RBP15.71■□□□□ 0.11
ERCC3-205ENST00000460485 GHRHRQ02643 423 aa15.71■□□□□ 0.11
ERCC3-205ENST00000460485 USP17L24Q0WX57 530 aa15.71■□□□□ 0.11
ERCC3-205ENST00000460485 SREBF2Q12772 1141 aa15.71■□□□□ 0.11
ERCC3-205ENST00000460485 ANGEL2Q5VTE6 544 aaKnown RBP15.71■□□□□ 0.11
ERCC3-205ENST00000460485 E4F1Q66K89 784 aaPredicted RBP15.71■□□□□ 0.11
ERCC3-205ENST00000460485 USP17L6PQ6QN14 398 aa15.71■□□□□ 0.11
ERCC3-205ENST00000460485 PPP4R3CPQ6ZMV5 832 aa15.71■□□□□ 0.11
ERCC3-205ENST00000460485 CSGALNACT2Q8N6G5 542 aa15.71■□□□□ 0.11
ERCC3-205ENST00000460485 ETNPPLQ8TBG4 499 aa15.71■□□□□ 0.11
ERCC3-205ENST00000460485 A0A1W2PRG0 241 aa15.7■□□□□ 0.1
ERCC3-205ENST00000460485 ALDH1A1P00352 501 aa15.7■□□□□ 0.1
ERCC3-205ENST00000460485 USP14P54578 494 aa15.7■□□□□ 0.1
ERCC3-205ENST00000460485 EHHADHQ08426 723 aa15.7■□□□□ 0.1
ERCC3-205ENST00000460485 CENPPQ6IPU0 288 aa15.7■□□□□ 0.1
ERCC3-205ENST00000460485 TMTC1Q8IUR5 882 aa15.7■□□□□ 0.1
ERCC3-205ENST00000460485 TMEM139Q8IV31 216 aa15.7■□□□□ 0.1
ERCC3-205ENST00000460485 POLR3CQ9BUI4 534 aaPredicted RBP15.7■□□□□ 0.1
ERCC3-205ENST00000460485 ASTN2O75129 1339 aaPredicted RBP15.69■□□□□ 0.1
ERCC3-205ENST00000460485 POTEFA5A3E0 1075 aa15.69■□□□□ 0.1
ERCC3-205ENST00000460485 CTNND1O60716 968 aaKnown RBP15.69■□□□□ 0.1
ERCC3-205ENST00000460485 GNA14O95837 355 aa15.69■□□□□ 0.1
ERCC3-205ENST00000460485 CCDC175P0C221 793 aa15.69■□□□□ 0.1
ERCC3-205ENST00000460485 RPA1P27694 616 aa15.69■□□□□ 0.1
ERCC3-205ENST00000460485 RRP1BQ14684 758 aaKnown RBP15.69■□□□□ 0.1
ERCC3-205ENST00000460485 FIGNQ5HY92 759 aa15.69■□□□□ 0.1
ERCC3-205ENST00000460485 FAM83BQ5T0W9 1011 aa15.69■□□□□ 0.1
ERCC3-205ENST00000460485 MCF2L2Q86YR7 1114 aa15.69■□□□□ 0.1
ERCC3-205ENST00000460485 APOBEC3FQ8IUX4 373 aaKnown RBP15.69■□□□□ 0.1
ERCC3-205ENST00000460485 NEK9Q8TD19 979 aa15.69■□□□□ 0.1
ERCC3-205ENST00000460485 SRRTQ9BXP5 876 aaKnown RBP15.69■□□□□ 0.1
ERCC3-205ENST00000460485 KIAA1683Q9H0B3 1180 aa15.69■□□□□ 0.1
ERCC3-205ENST00000460485 PPP2R3BQ9Y5P8 575 aa15.69■□□□□ 0.1
ERCC3-205ENST00000460485 MYMKA6NI61 221 aa15.68■□□□□ 0.1
ERCC3-205ENST00000460485 CTIFO43310 598 aaKnown RBP15.68■□□□□ 0.1
ERCC3-205ENST00000460485 ZNF76P36508 570 aa15.68■□□□□ 0.1
ERCC3-205ENST00000460485 MCM6Q14566 821 aa15.68■□□□□ 0.1
ERCC3-205ENST00000460485 TSR1Q2NL82 804 aaKnown RBP15.68■□□□□ 0.1
ERCC3-205ENST00000460485 USH1GQ495M9 461 aa15.68■□□□□ 0.1
ERCC3-205ENST00000460485 FKBP15Q5T1M5 1219 aa15.68■□□□□ 0.1
ERCC3-205ENST00000460485 NIPA1Q7RTP0 329 aa15.68■□□□□ 0.1
ERCC3-205ENST00000460485 DDX12PQ92771 950 aa15.68■□□□□ 0.1
ERCC3-205ENST00000460485 NUP88Q99567 741 aaPredicted RBP15.68■□□□□ 0.1
ERCC3-205ENST00000460485 FEZ1Q99689 392 aa15.68■□□□□ 0.1
ERCC3-205ENST00000460485 WDR11Q9BZH6 1224 aa15.68■□□□□ 0.1
ERCC3-205ENST00000460485 TMEM39BQ9GZU3 492 aa15.68■□□□□ 0.1
ERCC3-205ENST00000460485 AS3MTQ9HBK9 375 aa15.68■□□□□ 0.1
ERCC3-205ENST00000460485 TUFT1Q9NNX1 390 aa15.68■□□□□ 0.1
ERCC3-205ENST00000460485 A0A1W2PQJ5 194 aa15.67■□□□□ 0.1
ERCC3-205ENST00000460485 FRMD3A2A2Y4 597 aa15.67■□□□□ 0.1
ERCC3-205ENST00000460485 ICAM1P05362 532 aa15.67■□□□□ 0.1
ERCC3-205ENST00000460485 INHBEP58166 350 aa15.67■□□□□ 0.1
ERCC3-205ENST00000460485 ETF1P62495 437 aaKnown RBP15.67■□□□□ 0.1
ERCC3-205ENST00000460485 JAG1P78504 1218 aa15.67■□□□□ 0.1
ERCC3-205ENST00000460485 UBXN1Q04323 297 aa15.67■□□□□ 0.1
ERCC3-205ENST00000460485 SPIRE1Q08AE8 756 aa15.67■□□□□ 0.1
ERCC3-205ENST00000460485 SHROOM1Q2M3G4 852 aaPredicted RBP15.67■□□□□ 0.1
ERCC3-205ENST00000460485 PRR16Q569H4 304 aa15.67■□□□□ 0.1
ERCC3-205ENST00000460485 FAM26FQ5R3K3 315 aa15.67■□□□□ 0.1
ERCC3-205ENST00000460485 CYP26C1Q6V0L0 522 aa15.67■□□□□ 0.1
ERCC3-205ENST00000460485 MYOCDQ8IZQ8 938 aa15.67■□□□□ 0.1
ERCC3-205ENST00000460485 PRPF38AQ8NAV1 312 aaKnown RBP15.67■□□□□ 0.1
ERCC3-205ENST00000460485 KIAA0895Q8NCT3 520 aa15.67■□□□□ 0.1
ERCC3-205ENST00000460485 LRRC15Q8TF66 581 aa15.67■□□□□ 0.1
ERCC3-205ENST00000460485 LENG9Q96B70 501 aa15.67■□□□□ 0.1
ERCC3-205ENST00000460485 CNOT6LQ96LI5 555 aaKnown RBP15.67■□□□□ 0.1
ERCC3-205ENST00000460485 CEP63Q96MT8 703 aa15.67■□□□□ 0.1
ERCC3-205ENST00000460485 ERGIC2Q96RQ1 377 aa15.67■□□□□ 0.1
ERCC3-205ENST00000460485 PLIN2Q99541 437 aa15.67■□□□□ 0.1
ERCC3-205ENST00000460485 KCND2Q9NZV8 630 aa15.67■□□□□ 0.1
ERCC3-205ENST00000460485 DNM3Q9UQ16 869 aa15.67■□□□□ 0.1
ERCC3-205ENST00000460485 PPP2R2CQ9Y2T4 447 aa15.67■□□□□ 0.1
ERCC3-205ENST00000460485 CENPFP49454 3210 aa15.67■□□□□ 0.1
ERCC3-205ENST00000460485 PHIPQ8WWQ0 1821 aa15.66■□□□□ 0.1
ERCC3-205ENST00000460485 HTTP42858 3142 aa15.66■□□□□ 0.1
ERCC3-205ENST00000460485 RIOK3O14730 519 aaKnown RBP15.66■□□□□ 0.1
ERCC3-205ENST00000460485 OPLAHO14841 1288 aa15.66■□□□□ 0.1
ERCC3-205ENST00000460485 TEX33O43247 280 aa15.66■□□□□ 0.1
ERCC3-205ENST00000460485 PLA2G4BP0C869 781 aa15.66■□□□□ 0.1
ERCC3-205ENST00000460485 BCRP11274 1271 aa15.66■□□□□ 0.1
ERCC3-205ENST00000460485 STK4Q13043 487 aa15.66■□□□□ 0.1
ERCC3-205ENST00000460485 PPP2R5CQ13362 524 aa15.66■□□□□ 0.1
ERCC3-205ENST00000460485 RASA3Q14644 834 aa15.66■□□□□ 0.1
ERCC3-205ENST00000460485 HSP90AA4PQ58FG1 418 aa15.66■□□□□ 0.1
ERCC3-205ENST00000460485 MOB2Q70IA6 237 aa15.66■□□□□ 0.1
ERCC3-205ENST00000460485 CCDC84Q86UT8 332 aaPredicted RBP15.66■□□□□ 0.1
ERCC3-205ENST00000460485 MB21D1Q8N884 522 aa15.66■□□□□ 0.1
ERCC3-205ENST00000460485 ACER1Q8TDN7 264 aa15.66■□□□□ 0.1
ERCC3-205ENST00000460485 DUSP9Q99956 384 aaKnown RBP15.66■□□□□ 0.1
ERCC3-205ENST00000460485 SLF1Q9BQI6 1058 aa15.66■□□□□ 0.1
ERCC3-205ENST00000460485 TUBGCP2Q9BSJ2 902 aa15.66■□□□□ 0.1
ERCC3-205ENST00000460485 R3HDMLQ9H3Y0 253 aa15.66■□□□□ 0.1
ERCC3-205ENST00000460485 TAB2Q9NYJ8 693 aa15.66■□□□□ 0.1
ERCC3-205ENST00000460485 LOC285556D6RIA3 1793 aa15.66■□□□□ 0.1
ERCC3-205ENST00000460485 MYH11P35749 1972 aa15.66■□□□□ 0.1
ERCC3-205ENST00000460485 USP27XA6NNY8 438 aa15.65■□□□□ 0.1
ERCC3-205ENST00000460485 GYPCP04921 128 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms