RNA–Protein interactions for RNA: ENST00000456923.5

FN1-213, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 3,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-213ENST00000456923 SPO11Q9Y5K1 396 aa7.41□□□□□ -1.22
FN1-213ENST00000456923 NID2Q14112 1375 aa7.41□□□□□ -1.22
FN1-213ENST00000456923 TRIM43BA6NCK2 446 aa7.41□□□□□ -1.22
FN1-213ENST00000456923 GOLGA6L9A6NEM1 432 aa7.41□□□□□ -1.22
FN1-213ENST00000456923 KRT14P02533 472 aa7.41□□□□□ -1.22
FN1-213ENST00000456923 MX1P20591 662 aa7.41□□□□□ -1.22
FN1-213ENST00000456923 TIMM10P62072 90 aa7.41□□□□□ -1.22
FN1-213ENST00000456923 KLC1Q07866 573 aa7.41□□□□□ -1.22
FN1-213ENST00000456923 NSUN2Q08J23 767 aaKnown RBP eCLIP7.41□□□□□ -1.22
FN1-213ENST00000456923 FILIP1LQ4L180 1135 aa7.41□□□□□ -1.22
FN1-213ENST00000456923 WNK4Q96J92 1243 aa7.41□□□□□ -1.22
FN1-213ENST00000456923 UPF3BQ9BZI7 483 aaKnown RBP7.41□□□□□ -1.22
FN1-213ENST00000456923 PAG1Q9NWQ8 432 aa7.41□□□□□ -1.22
FN1-213ENST00000456923 SLC5A4Q9NY91 659 aa7.41□□□□□ -1.22
FN1-213ENST00000456923 IP6K2Q9UHH9 426 aa7.41□□□□□ -1.22
FN1-213ENST00000456923 EFR3BQ9Y2G0 817 aa7.41□□□□□ -1.22
FN1-213ENST00000456923 PCDHGC5Q9Y5F6 944 aa7.41□□□□□ -1.22
FN1-213ENST00000456923 FLT1P17948 1338 aa7.4□□□□□ -1.22
FN1-213ENST00000456923 HIP1O00291 1037 aa7.4□□□□□ -1.22
FN1-213ENST00000456923 P4HA2O15460 535 aa7.4□□□□□ -1.22
FN1-213ENST00000456923 AKR1B10O60218 316 aa7.4□□□□□ -1.22
FN1-213ENST00000456923 ZNF202O95125 648 aa7.4□□□□□ -1.22
FN1-213ENST00000456923 CPP00450 1065 aa7.4□□□□□ -1.22
FN1-213ENST00000456923 FAM200BP0CF97 657 aa7.4□□□□□ -1.22
FN1-213ENST00000456923 KCNA2P16389 499 aa7.4□□□□□ -1.22
FN1-213ENST00000456923 PRDX5P30044 214 aa7.4□□□□□ -1.22
FN1-213ENST00000456923 IREB2P48200 963 aaKnown RBP7.4□□□□□ -1.22
FN1-213ENST00000456923 ZNF75DP51815 510 aa7.4□□□□□ -1.22
FN1-213ENST00000456923 GUCY2FP51841 1108 aa7.4□□□□□ -1.22
FN1-213ENST00000456923 MAP3K12Q12852 859 aa7.4□□□□□ -1.22
FN1-213ENST00000456923 SPRYD7Q5W111 196 aa7.4□□□□□ -1.22
FN1-213ENST00000456923 ATL3Q6DD88 541 aa7.4□□□□□ -1.22
FN1-213ENST00000456923 BICD2Q8TD16 824 aa7.4□□□□□ -1.22
FN1-213ENST00000456923 VMP1Q96GC9 406 aa7.4□□□□□ -1.22
FN1-213ENST00000456923 MS4A4AQ96JQ5 239 aa7.4□□□□□ -1.22
FN1-213ENST00000456923 CCDC85AQ96PX6 553 aaPredicted RBP7.4□□□□□ -1.22
FN1-213ENST00000456923 FUT8Q9BYC5 575 aa7.4□□□□□ -1.22
FN1-213ENST00000456923 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.4□□□□□ -1.22
FN1-213ENST00000456923 SIL1Q9H173 461 aa7.4□□□□□ -1.22
FN1-213ENST00000456923 KAT14Q9H8E8 782 aa7.4□□□□□ -1.22
FN1-213ENST00000456923 ABCB6Q9NP58 842 aa7.4□□□□□ -1.22
FN1-213ENST00000456923 ZNF219Q9P2Y4 722 aaPredicted RBP7.4□□□□□ -1.22
FN1-213ENST00000456923 C2CD2Q9Y426 696 aa7.4□□□□□ -1.22
FN1-213ENST00000456923 SNCAIPQ9Y6H5 919 aa7.4□□□□□ -1.22
FN1-213ENST00000456923 A0A0G2JLL6 359 aaPredicted RBP7.4□□□□□ -1.22
FN1-213ENST00000456923 A0A1B0GVL5 298 aa7.4□□□□□ -1.22
FN1-213ENST00000456923 TTLL13PA6NNM8 815 aa7.4□□□□□ -1.22
FN1-213ENST00000456923 DDX5P17844 614 aaKnown RBP7.4□□□□□ -1.22
FN1-213ENST00000456923 PDCLQ13371 301 aa7.4□□□□□ -1.22
FN1-213ENST00000456923 Q6ZUG5 572 aa7.4□□□□□ -1.22
FN1-213ENST00000456923 BZW1Q7L1Q6 419 aaKnown RBP7.4□□□□□ -1.22
FN1-213ENST00000456923 PRRT2Q7Z6L0 340 aaPredicted RBP7.4□□□□□ -1.22
FN1-213ENST00000456923 AACSQ86V21 672 aa7.4□□□□□ -1.22
FN1-213ENST00000456923 FAM76AQ8TAV0 307 aa7.4□□□□□ -1.22
FN1-213ENST00000456923 SRPK1Q96SB4 655 aaKnown RBP7.4□□□□□ -1.22
FN1-213ENST00000456923 CORO1BQ9BR76 489 aa7.4□□□□□ -1.22
FN1-213ENST00000456923 TCP11L1Q9NUJ3 509 aa7.4□□□□□ -1.22
FN1-213ENST00000456923 FAM53CQ9NYF3 392 aa7.4□□□□□ -1.22
FN1-213ENST00000456923 RBMX2Q9Y388 322 aaKnown RBP7.4□□□□□ -1.22
FN1-213ENST00000456923 ZDHHC9Q9Y397 364 aa7.4□□□□□ -1.22
FN1-213ENST00000456923 A6NJR5 290 aa7.4□□□□□ -1.23
FN1-213ENST00000456923 SPDYE16A6NNV3 312 aaPredicted RBP7.4□□□□□ -1.23
FN1-213ENST00000456923 G3V3G9 751 aa7.4□□□□□ -1.23
FN1-213ENST00000456923 PDE6AP16499 860 aa7.4□□□□□ -1.23
FN1-213ENST00000456923 RRM1P23921 792 aa7.4□□□□□ -1.23
FN1-213ENST00000456923 PPP1R2P41236 205 aa7.4□□□□□ -1.23
FN1-213ENST00000456923 ZAP70P43403 619 aa7.4□□□□□ -1.23
FN1-213ENST00000456923 SREBF2Q12772 1141 aa7.4□□□□□ -1.23
FN1-213ENST00000456923 HSP90AA4PQ58FG1 418 aa7.4□□□□□ -1.23
FN1-213ENST00000456923 DCAF8Q5TAQ9 597 aa7.4□□□□□ -1.23
FN1-213ENST00000456923 RCSD1Q6JBY9 416 aa7.4□□□□□ -1.23
FN1-213ENST00000456923 PPP1R2P3Q6NXS1 205 aa7.4□□□□□ -1.23
FN1-213ENST00000456923 VPS37DQ86XT2 251 aa7.4□□□□□ -1.23
FN1-213ENST00000456923 LRRC8AQ8IWT6 810 aa7.4□□□□□ -1.23
FN1-213ENST00000456923 SREK1Q8WXA9 508 aaKnown RBP7.4□□□□□ -1.23
FN1-213ENST00000456923 APPBP2Q92624 585 aa7.4□□□□□ -1.23
FN1-213ENST00000456923 CAPZA3Q96KX2 299 aa7.4□□□□□ -1.23
FN1-213ENST00000456923 PLXNA1Q9UIW2 1896 aa7.39□□□□□ -1.23
FN1-213ENST00000456923 SLC8A3P57103 927 aa7.39□□□□□ -1.23
FN1-213ENST00000456923 MAP3K9P80192 1104 aa7.39□□□□□ -1.23
FN1-213ENST00000456923 MYBPC3Q14896 1274 aa7.39□□□□□ -1.23
FN1-213ENST00000456923 DEFB115Q30KQ5 88 aa7.39□□□□□ -1.23
FN1-213ENST00000456923 LONRF3Q496Y0 759 aa7.39□□□□□ -1.23
FN1-213ENST00000456923 TBC1D10BQ4KMP7 808 aaPredicted RBP7.39□□□□□ -1.23
FN1-213ENST00000456923 RASIP1Q5U651 963 aa7.39□□□□□ -1.23
FN1-213ENST00000456923 PPFIBP1Q86W92 1011 aa7.39□□□□□ -1.23
FN1-213ENST00000456923 CCDC12Q8WUD4 166 aaPredicted RBP7.39□□□□□ -1.23
FN1-213ENST00000456923 ANKS1AQ92625 1134 aa7.39□□□□□ -1.23
FN1-213ENST00000456923 FERD3LQ96RJ6 166 aa7.39□□□□□ -1.23
FN1-213ENST00000456923 GLIS2Q9BZE0 524 aaPredicted RBP7.39□□□□□ -1.23
FN1-213ENST00000456923 CBX8Q9HC52 389 aa7.39□□□□□ -1.23
FN1-213ENST00000456923 KLF15Q9UIH9 416 aa7.39□□□□□ -1.23
FN1-213ENST00000456923 SNAP23O00161 211 aa7.39□□□□□ -1.23
FN1-213ENST00000456923 BTDP43251 543 aa7.39□□□□□ -1.23
FN1-213ENST00000456923 PDE1AP54750 535 aa7.39□□□□□ -1.23
FN1-213ENST00000456923 PRMT2P55345 433 aa7.39□□□□□ -1.23
FN1-213ENST00000456923 MMTAG2Q9BU76 263 aaKnown RBP7.39□□□□□ -1.23
FN1-213ENST00000456923 GPCPD1Q9NPB8 672 aa7.39□□□□□ -1.23
FN1-213ENST00000456923 RASAL2Q9UJF2 1139 aa7.39□□□□□ -1.23
FN1-213ENST00000456923 ADM5C9JUS6 153 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms