RNA–Protein interactions for RNA: ENST00000454704.5

GTF3C2-206, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 1 (best)

Gene GTF3C2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-206ENST00000454704 PURBQ96QR8 312 aaKnown RBP11.76□□□□□ -0.53
GTF3C2-206ENST00000454704 DUSP9Q99956 384 aaKnown RBP11.76□□□□□ -0.53
GTF3C2-206ENST00000454704 SWAP70Q9UH65 585 aa11.76□□□□□ -0.53
GTF3C2-206ENST00000454704 STX8Q9UNK0 236 aa11.76□□□□□ -0.53
GTF3C2-206ENST00000454704 SAR1BQ9Y6B6 198 aa11.76□□□□□ -0.53
GTF3C2-206ENST00000454704 STK24Q9Y6E0 443 aa11.76□□□□□ -0.53
GTF3C2-206ENST00000454704 MKI67P46013 3256 aaKnown RBP11.75□□□□□ -0.53
GTF3C2-206ENST00000454704 KDM3AQ9Y4C1 1321 aa11.75□□□□□ -0.53
GTF3C2-206ENST00000454704 BRCA2P51587 3418 aa11.75□□□□□ -0.53
GTF3C2-206ENST00000454704 OTOFQ9HC10 1997 aa11.75□□□□□ -0.53
GTF3C2-206ENST00000454704 SPDYE2BA6NHP3 402 aa11.75□□□□□ -0.53
GTF3C2-206ENST00000454704 MANSC4A6NHS7 340 aaPredicted RBP11.75□□□□□ -0.53
GTF3C2-206ENST00000454704 CCNT1O60563 726 aaKnown RBP11.75□□□□□ -0.53
GTF3C2-206ENST00000454704 CLSTN1O94985 981 aa11.75□□□□□ -0.53
GTF3C2-206ENST00000454704 SPDYE6P0CI01 402 aa11.75□□□□□ -0.53
GTF3C2-206ENST00000454704 TRIM21P19474 475 aaKnown RBP11.75□□□□□ -0.53
GTF3C2-206ENST00000454704 MTIF2P46199 727 aaKnown RBP11.75□□□□□ -0.53
GTF3C2-206ENST00000454704 VAV2P52735 878 aa11.75□□□□□ -0.53
GTF3C2-206ENST00000454704 ASIC1P78348 528 aa11.75□□□□□ -0.53
GTF3C2-206ENST00000454704 MAN2A1Q16706 1144 aa11.75□□□□□ -0.53
GTF3C2-206ENST00000454704 PPP4R3AQ6IN85 833 aa11.75□□□□□ -0.53
GTF3C2-206ENST00000454704 KIAA1328Q86T90 577 aa11.75□□□□□ -0.53
GTF3C2-206ENST00000454704 IFNL1Q8IU54 200 aa11.75□□□□□ -0.53
GTF3C2-206ENST00000454704 TEX2Q8IWB9 1127 aa11.75□□□□□ -0.53
GTF3C2-206ENST00000454704 MTMR14Q8NCE2 650 aa11.75□□□□□ -0.53
GTF3C2-206ENST00000454704 TRIM58Q8NG06 486 aa11.75□□□□□ -0.53
GTF3C2-206ENST00000454704 JAKMIP2Q96AA8 810 aa11.75□□□□□ -0.53
GTF3C2-206ENST00000454704 SLC10A4Q96EP9 437 aa11.75□□□□□ -0.53
GTF3C2-206ENST00000454704 WNK4Q96J92 1243 aa11.75□□□□□ -0.53
GTF3C2-206ENST00000454704 TSG101Q99816 390 aa11.75□□□□□ -0.53
GTF3C2-206ENST00000454704 SLF1Q9BQI6 1058 aa11.75□□□□□ -0.53
GTF3C2-206ENST00000454704 VEZTQ9HBM0 779 aa11.75□□□□□ -0.53
GTF3C2-206ENST00000454704 CWC15Q9P013 229 aaKnown RBP11.75□□□□□ -0.53
GTF3C2-206ENST00000454704 L1RE1Q9UN81 338 aa11.75□□□□□ -0.53
GTF3C2-206ENST00000454704 IGF2BP3O00425 579 aaKnown RBP eCLIP11.74□□□□□ -0.538e-8■■■■■ 28.4
GTF3C2-206ENST00000454704 SASH3O75995 380 aa11.74□□□□□ -0.53
GTF3C2-206ENST00000454704 SEC31AO94979 1220 aaKnown RBP11.74□□□□□ -0.53
GTF3C2-206ENST00000454704 LCA5LO95447 670 aa11.74□□□□□ -0.53
GTF3C2-206ENST00000454704 ALDH1A1P00352 501 aa11.74□□□□□ -0.53
GTF3C2-206ENST00000454704 SNHG28P0DPA3 235 aa11.74□□□□□ -0.53
GTF3C2-206ENST00000454704 ZBTB48P10074 688 aaPredicted RBP11.74□□□□□ -0.53
GTF3C2-206ENST00000454704 ADCY7P51828 1080 aa11.74□□□□□ -0.53
GTF3C2-206ENST00000454704 KIF5AQ12840 1032 aa11.74□□□□□ -0.53
GTF3C2-206ENST00000454704 SPA17Q15506 151 aa11.74□□□□□ -0.53
GTF3C2-206ENST00000454704 LETM2Q2VYF4 491 aa11.74□□□□□ -0.53
GTF3C2-206ENST00000454704 CCDC122Q5T0U0 273 aa11.74□□□□□ -0.53
GTF3C2-206ENST00000454704 ZNF572Q7Z3I7 529 aaPredicted RBP11.74□□□□□ -0.53
GTF3C2-206ENST00000454704 FAM71BQ8TC56 605 aa11.74□□□□□ -0.53
GTF3C2-206ENST00000454704 DYNLL2Q96FJ2 89 aa11.74□□□□□ -0.53
GTF3C2-206ENST00000454704 CDK5RAP3Q96JB5 506 aa11.74□□□□□ -0.53
GTF3C2-206ENST00000454704 MTMR9Q96QG7 549 aa11.74□□□□□ -0.53
GTF3C2-206ENST00000454704 NOC4LQ9BVI4 516 aaKnown RBP11.74□□□□□ -0.53
GTF3C2-206ENST00000454704 IRX2Q9BZI1 471 aaPredicted RBP11.74□□□□□ -0.53
GTF3C2-206ENST00000454704 NT5C3AQ9H0P0 336 aa11.74□□□□□ -0.53
GTF3C2-206ENST00000454704 TSPYL1Q9H0U9 437 aa11.74□□□□□ -0.53
GTF3C2-206ENST00000454704 LUC7LQ9NQ29 371 aaKnown RBP11.74□□□□□ -0.53
GTF3C2-206ENST00000454704 PCDH10Q9P2E7 1040 aa11.74□□□□□ -0.53
GTF3C2-206ENST00000454704 PLAGL2Q9UPG8 496 aa11.74□□□□□ -0.53
GTF3C2-206ENST00000454704 PPP2R3BQ9Y5P8 575 aa11.74□□□□□ -0.53
GTF3C2-206ENST00000454704 KIAA0100Q14667 2235 aaKnown RBP11.73□□□□□ -0.53
GTF3C2-206ENST00000454704 TRIM49BA6NDI0 452 aa11.73□□□□□ -0.53
GTF3C2-206ENST00000454704 PPP1R12BO60237 982 aaPredicted RBP11.73□□□□□ -0.53
GTF3C2-206ENST00000454704 GNA14O95837 355 aa11.73□□□□□ -0.53
GTF3C2-206ENST00000454704 USP14P54578 494 aa11.73□□□□□ -0.53
GTF3C2-206ENST00000454704 HERVK_113P62684 666 aa11.73□□□□□ -0.53
GTF3C2-206ENST00000454704 CALCRLQ16602 461 aa11.73□□□□□ -0.53
GTF3C2-206ENST00000454704 SLC35G1Q2M3R5 365 aa11.73□□□□□ -0.53
GTF3C2-206ENST00000454704 HSP90B2PQ58FF3 399 aa11.73□□□□□ -0.53
GTF3C2-206ENST00000454704 GPATCH4Q5T3I0 446 aaKnown RBP11.73□□□□□ -0.53
GTF3C2-206ENST00000454704 NBPF12Q5TAG4 269 aaPredicted RBP11.73□□□□□ -0.53
GTF3C2-206ENST00000454704 WDR59Q6PJI9 974 aa11.73□□□□□ -0.53
GTF3C2-206ENST00000454704 KCTD17Q8N5Z5 321 aa11.73□□□□□ -0.53
GTF3C2-206ENST00000454704 RASGRP4Q8TDF6 673 aa11.73□□□□□ -0.53
GTF3C2-206ENST00000454704 TBCKQ8TEA7 893 aa11.73□□□□□ -0.53
GTF3C2-206ENST00000454704 LARP4BQ92615 738 aaKnown RBP11.73□□□□□ -0.53
GTF3C2-206ENST00000454704 PRMT6Q96LA8 375 aaPredicted RBP11.73□□□□□ -0.53
GTF3C2-206ENST00000454704 RNF14Q9UBS8 474 aa11.73□□□□□ -0.53
GTF3C2-206ENST00000454704 LRWD1Q9UFC0 647 aa11.73□□□□□ -0.53
GTF3C2-206ENST00000454704 PUF60Q9UHX1 559 aaKnown RBP11.73□□□□□ -0.53
GTF3C2-206ENST00000454704 REXO2Q9Y3B8 237 aaKnown RBP11.73□□□□□ -0.53
GTF3C2-206ENST00000454704 TRIM17Q9Y577 477 aa11.73□□□□□ -0.53
GTF3C2-206ENST00000454704 IGKV6D-41A0A0C4DH26 115 aa11.72□□□□□ -0.53
GTF3C2-206ENST00000454704 SSU72P8A0A1W2PR75 194 aa11.72□□□□□ -0.53
GTF3C2-206ENST00000454704 B4DLN1 442 aa11.72□□□□□ -0.53
GTF3C2-206ENST00000454704 TACC1O75410 805 aa11.72□□□□□ -0.53
GTF3C2-206ENST00000454704 GJA5P36382 358 aa11.72□□□□□ -0.53
GTF3C2-206ENST00000454704 RBM5P52756 815 aaKnown RBP eCLIP11.72□□□□□ -0.53
GTF3C2-206ENST00000454704 RHBDL3P58872 404 aa11.72□□□□□ -0.53
GTF3C2-206ENST00000454704 SUPT20HL1Q3ZLR7 823 aa11.72□□□□□ -0.53
GTF3C2-206ENST00000454704 VWA3BQ502W6 1294 aa11.72□□□□□ -0.53
GTF3C2-206ENST00000454704 HYIQ5T013 277 aa11.72□□□□□ -0.53
GTF3C2-206ENST00000454704 KRT79Q5XKE5 535 aa11.72□□□□□ -0.53
GTF3C2-206ENST00000454704 ANKRD40Q6AI12 368 aa11.72□□□□□ -0.53
GTF3C2-206ENST00000454704 MOXD1Q6UVY6 613 aa11.72□□□□□ -0.53
GTF3C2-206ENST00000454704 OTOP1Q7RTM1 612 aa11.72□□□□□ -0.53
GTF3C2-206ENST00000454704 MAPKAPK5Q8IW41 473 aa11.72□□□□□ -0.53
GTF3C2-206ENST00000454704 SYN2Q92777 582 aaPredicted RBP11.72□□□□□ -0.53
GTF3C2-206ENST00000454704 SECISBP2LQ93073 1101 aaKnown RBP11.72□□□□□ -0.53
GTF3C2-206ENST00000454704 CEP63Q96MT8 703 aa11.72□□□□□ -0.53
GTF3C2-206ENST00000454704 CHP1Q99653 195 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms