RNA–Protein interactions for RNA: ENST00000451903.2

CPS1-204, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best) BASIC

Gene CPS1, Length 4,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-204ENST00000451903 RILPL1Q5EBL4 403 aa6.92□□□□□ -1.3
CPS1-204ENST00000451903 C6orf183Q5T699 404 aa6.92□□□□□ -1.3
CPS1-204ENST00000451903 LVRNQ6Q4G3 990 aa6.92□□□□□ -1.3
CPS1-204ENST00000451903 YTHDF3Q7Z739 585 aaKnown RBP6.92□□□□□ -1.3
CPS1-204ENST00000451903 SPARTQ8N0X7 666 aa6.92□□□□□ -1.3
CPS1-204ENST00000451903 POMGNT1Q8WZA1 660 aa6.92□□□□□ -1.3
CPS1-204ENST00000451903 CNKSR1Q969H4 720 aa6.92□□□□□ -1.3
CPS1-204ENST00000451903 ACAP3Q96P50 834 aa6.92□□□□□ -1.3
CPS1-204ENST00000451903 NUP88Q99567 741 aaPredicted RBP6.92□□□□□ -1.3
CPS1-204ENST00000451903 CCDC90BQ9GZT6 254 aa6.92□□□□□ -1.3
CPS1-204ENST00000451903 MOV10Q9HCE1 1003 aaKnown RBP6.92□□□□□ -1.3
CPS1-204ENST00000451903 TBCCD1Q9NVR7 557 aa6.92□□□□□ -1.3
CPS1-204ENST00000451903 MBD2Q9UBB5 411 aa6.92□□□□□ -1.3
CPS1-204ENST00000451903 PLAAQ9Y263 795 aa6.92□□□□□ -1.3
CPS1-204ENST00000451903 TELO2Q9Y4R8 837 aa6.92□□□□□ -1.3
CPS1-204ENST00000451903 RNF123Q5XPI4 1314 aa6.92□□□□□ -1.3
CPS1-204ENST00000451903 ATXN2Q99700 1313 aaKnown RBP6.92□□□□□ -1.3
CPS1-204ENST00000451903 NCAM2O15394 837 aa6.92□□□□□ -1.3
CPS1-204ENST00000451903 ALDH1L1O75891 902 aa6.92□□□□□ -1.3
CPS1-204ENST00000451903 CSPG5O95196 566 aa6.92□□□□□ -1.3
CPS1-204ENST00000451903 IFNA16P05015 189 aa6.92□□□□□ -1.3
CPS1-204ENST00000451903 ATF6P18850 670 aa6.92□□□□□ -1.3
CPS1-204ENST00000451903 VCPP55072 806 aaKnown RBP6.92□□□□□ -1.3
CPS1-204ENST00000451903 AMPD3Q01432 767 aa6.92□□□□□ -1.3
CPS1-204ENST00000451903 COTL1Q14019 142 aa6.92□□□□□ -1.3
CPS1-204ENST00000451903 LRRC8BQ6P9F7 803 aa6.92□□□□□ -1.3
CPS1-204ENST00000451903 HDDC2Q7Z4H3 204 aa6.92□□□□□ -1.3
CPS1-204ENST00000451903 ADCK1Q86TW2 530 aa6.92□□□□□ -1.3
CPS1-204ENST00000451903 CDC26Q8NHZ8 85 aa6.92□□□□□ -1.3
CPS1-204ENST00000451903 TUBGCP5Q96RT8 1024 aa6.92□□□□□ -1.3
CPS1-204ENST00000451903 CEP44Q9C0F1 390 aa6.92□□□□□ -1.3
CPS1-204ENST00000451903 LAMC3Q9Y6N6 1575 aa6.91□□□□□ -1.3
CPS1-204ENST00000451903 KRT16P08779 473 aa6.91□□□□□ -1.3
CPS1-204ENST00000451903 SOX11P35716 441 aa6.91□□□□□ -1.3
CPS1-204ENST00000451903 ZNF76P36508 570 aa6.91□□□□□ -1.3
CPS1-204ENST00000451903 VHLP40337 213 aa6.91□□□□□ -1.3
CPS1-204ENST00000451903 NLRP6P59044 892 aa6.91□□□□□ -1.3
CPS1-204ENST00000451903 VBP1P61758 197 aa6.91□□□□□ -1.3
CPS1-204ENST00000451903 CTTNQ14247 550 aaKnown RBP6.91□□□□□ -1.3
CPS1-204ENST00000451903 TRIM67Q6ZTA4 783 aa6.91□□□□□ -1.3
CPS1-204ENST00000451903 UNC45BQ8IWX7 931 aa6.91□□□□□ -1.3
CPS1-204ENST00000451903 AOPEPQ8N6M6 819 aa6.91□□□□□ -1.3
CPS1-204ENST00000451903 SPERTQ8NA61 448 aa6.91□□□□□ -1.3
CPS1-204ENST00000451903 BRSK1Q8TDC3 778 aa6.91□□□□□ -1.3
CPS1-204ENST00000451903 ZNF473Q8WTR7 871 aaKnown RBP6.91□□□□□ -1.3
CPS1-204ENST00000451903 SPIRE2Q8WWL2 714 aa6.91□□□□□ -1.3
CPS1-204ENST00000451903 C8orf76Q96K31 380 aa6.91□□□□□ -1.3
CPS1-204ENST00000451903 CNDP2Q96KP4 475 aaKnown RBP6.91□□□□□ -1.3
CPS1-204ENST00000451903 CBX8Q9HC52 389 aa6.91□□□□□ -1.3
CPS1-204ENST00000451903 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.91□□□□□ -1.3
CPS1-204ENST00000451903 VTI1BQ9UEU0 232 aa6.91□□□□□ -1.3
CPS1-204ENST00000451903 SLC8A2Q9UPR5 921 aa6.91□□□□□ -1.3
CPS1-204ENST00000451903 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.91□□□□□ -1.3
CPS1-204ENST00000451903 CFAP65Q6ZU64 1925 aaKnown RBP6.91□□□□□ -1.3
CPS1-204ENST00000451903 ASNA1O43681 348 aa6.91□□□□□ -1.3
CPS1-204ENST00000451903 KRT15P19012 456 aa6.91□□□□□ -1.3
CPS1-204ENST00000451903 CACNA2D1P54289 1103 aa6.91□□□□□ -1.3
CPS1-204ENST00000451903 USP46P62068 366 aa6.91□□□□□ -1.3
CPS1-204ENST00000451903 MED21Q13503 144 aa6.91□□□□□ -1.3
CPS1-204ENST00000451903 BLMHQ13867 455 aa6.91□□□□□ -1.3
CPS1-204ENST00000451903 TRIM25Q14258 630 aaKnown RBP6.91□□□□□ -1.3
CPS1-204ENST00000451903 BORAQ6PGQ7 559 aa6.91□□□□□ -1.3
CPS1-204ENST00000451903 ZNF662Q6ZS27 426 aa6.91□□□□□ -1.3
CPS1-204ENST00000451903 ATP6V1G3Q96LB4 118 aa6.91□□□□□ -1.3
CPS1-204ENST00000451903 SLC39A2Q9NP94 309 aa6.91□□□□□ -1.3
CPS1-204ENST00000451903 KCNK9Q9NPC2 374 aa6.91□□□□□ -1.3
CPS1-204ENST00000451903 TMOD3Q9NYL9 352 aa6.91□□□□□ -1.3
CPS1-204ENST00000451903 RTEL1Q9NZ71 1219 aa6.91□□□□□ -1.3
CPS1-204ENST00000451903 STRIP2Q9ULQ0 834 aa6.91□□□□□ -1.3
CPS1-204ENST00000451903 TRAF3IP3Q9Y228 551 aa6.91□□□□□ -1.3
CPS1-204ENST00000451903 PCDHGC5Q9Y5F6 944 aa6.91□□□□□ -1.3
CPS1-204ENST00000451903 PLEKHH2Q8IVE3 1493 aa6.91□□□□□ -1.3
CPS1-204ENST00000451903 GSTA1P08263 222 aa6.91□□□□□ -1.3
CPS1-204ENST00000451903 IFIT2P09913 472 aaKnown RBP6.91□□□□□ -1.3
CPS1-204ENST00000451903 HSPA6P17066 643 aa6.91□□□□□ -1.3
CPS1-204ENST00000451903 CDH3P22223 829 aa6.91□□□□□ -1.3
CPS1-204ENST00000451903 SLC1A1P43005 524 aa6.91□□□□□ -1.3
CPS1-204ENST00000451903 MSH2P43246 934 aa6.91□□□□□ -1.3
CPS1-204ENST00000451903 CSNK2BP67870 215 aa6.91□□□□□ -1.3
CPS1-204ENST00000451903 FKBP4Q02790 459 aaKnown RBP eCLIP6.91□□□□□ -1.3
CPS1-204ENST00000451903 MTX1Q13505 466 aa6.91□□□□□ -1.3
CPS1-204ENST00000451903 PPP2R5BQ15173 497 aa6.91□□□□□ -1.3
CPS1-204ENST00000451903 DGKKQ5KSL6 1271 aa6.91□□□□□ -1.3
CPS1-204ENST00000451903 ANKRD20A3Q5VUR7 823 aa6.91□□□□□ -1.3
CPS1-204ENST00000451903 KRT73Q86Y46 540 aa6.91□□□□□ -1.3
CPS1-204ENST00000451903 ZNF713Q8N859 430 aaPredicted RBP6.91□□□□□ -1.3
CPS1-204ENST00000451903 CAPSLQ8WWF8 208 aa6.91□□□□□ -1.3
CPS1-204ENST00000451903 RUNDC1Q96C34 613 aa6.91□□□□□ -1.3
CPS1-204ENST00000451903 SDCCAG3Q96C92 435 aa6.91□□□□□ -1.3
CPS1-204ENST00000451903 TUBGCP3Q96CW5 907 aa6.91□□□□□ -1.3
CPS1-204ENST00000451903 ZFYVE19Q96K21 471 aa6.91□□□□□ -1.3
CPS1-204ENST00000451903 SELENOOQ9BVL4 669 aa6.91□□□□□ -1.3
CPS1-204ENST00000451903 PLGRKTQ9HBL7 147 aa6.91□□□□□ -1.3
CPS1-204ENST00000451903 TIMMDC1Q9NPL8 285 aa6.91□□□□□ -1.3
CPS1-204ENST00000451903 SH2B1Q9NRF2 756 aaPredicted RBP6.91□□□□□ -1.3
CPS1-204ENST00000451903 TUBGCP4Q9UGJ1 667 aa6.91□□□□□ -1.3
CPS1-204ENST00000451903 LRCH1Q9Y2L9 728 aa6.91□□□□□ -1.3
CPS1-204ENST00000451903 TTLL13PA6NNM8 815 aa6.91□□□□□ -1.3
CPS1-204ENST00000451903 DNALI1O14645 258 aaPredicted RBP6.91□□□□□ -1.3
CPS1-204ENST00000451903 GLRX3O76003 335 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms