RNA–Protein interactions for RNA: ENST00000447024.5

SMARCE1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-206ENST00000447024 CBX7O95931 251 aa9.73□□□□□ -0.85
SMARCE1-206ENST00000447024 IGHMBP2P38935 993 aaKnown RBP9.73□□□□□ -0.85
SMARCE1-206ENST00000447024 ETF1P62495 437 aaKnown RBP9.73□□□□□ -0.85
SMARCE1-206ENST00000447024 LDHDQ86WU2 507 aa9.73□□□□□ -0.85
SMARCE1-206ENST00000447024 ARHGAP45Q92619 1136 aa9.73□□□□□ -0.85
SMARCE1-206ENST00000447024 UBE2FQ969M7 185 aa9.73□□□□□ -0.85
SMARCE1-206ENST00000447024 TAF1DQ9H5J8 278 aaPredicted RBP9.73□□□□□ -0.85
SMARCE1-206ENST00000447024 UTYO14607 1347 aa9.73□□□□□ -0.85
SMARCE1-206ENST00000447024 ZNF541Q9H0D2 1346 aa9.73□□□□□ -0.85
SMARCE1-206ENST00000447024 TAF1P21675 1872 aa9.72□□□□□ -0.85
SMARCE1-206ENST00000447024 ANKRD18BA2A2Z9 1011 aa9.72□□□□□ -0.85
SMARCE1-206ENST00000447024 RPS12P25398 132 aaKnown RBP9.72□□□□□ -0.85
SMARCE1-206ENST00000447024 CDK8P49336 464 aa9.72□□□□□ -0.85
SMARCE1-206ENST00000447024 MMP14P50281 582 aa9.72□□□□□ -0.85
SMARCE1-206ENST00000447024 GPSM2P81274 684 aa9.72□□□□□ -0.85
SMARCE1-206ENST00000447024 IFIT5Q13325 482 aaKnown RBP9.72□□□□□ -0.85
SMARCE1-206ENST00000447024 WIPI1Q5MNZ9 446 aaPredicted RBP9.72□□□□□ -0.85
SMARCE1-206ENST00000447024 CIAPIN1Q6FI81 312 aa9.72□□□□□ -0.85
SMARCE1-206ENST00000447024 ZNF746Q6NUN9 644 aaPredicted RBP9.72□□□□□ -0.85
SMARCE1-206ENST00000447024 HID1Q8IV36 788 aa9.72□□□□□ -0.85
SMARCE1-206ENST00000447024 TBC1D16Q8TBP0 767 aa9.72□□□□□ -0.85
SMARCE1-206ENST00000447024 DPF2Q92785 391 aa9.72□□□□□ -0.85
SMARCE1-206ENST00000447024 ANKRD2Q9GZV1 360 aa9.72□□□□□ -0.85
SMARCE1-206ENST00000447024 GREM2Q9H772 168 aa9.72□□□□□ -0.85
SMARCE1-206ENST00000447024 KCNK12Q9HB15 430 aa9.72□□□□□ -0.85
SMARCE1-206ENST00000447024 SMC4Q9NTJ3 1288 aa9.72□□□□□ -0.85
SMARCE1-206ENST00000447024 SLAMF8Q9P0V8 285 aa9.72□□□□□ -0.85
SMARCE1-206ENST00000447024 KIF16BQ96L93 1317 aa9.72□□□□□ -0.85
SMARCE1-206ENST00000447024 DUOX1Q9NRD9 1551 aa9.71□□□□□ -0.85
SMARCE1-206ENST00000447024 LTBP1Q14766 1721 aa9.71□□□□□ -0.85
SMARCE1-206ENST00000447024 IPO8O15397 1037 aaKnown RBP9.71□□□□□ -0.86
SMARCE1-206ENST00000447024 EPHX2P34913 555 aa9.71□□□□□ -0.86
SMARCE1-206ENST00000447024 CCT4P50991 539 aaKnown RBP9.71□□□□□ -0.86
SMARCE1-206ENST00000447024 CXCL9Q07325 125 aa9.71□□□□□ -0.86
SMARCE1-206ENST00000447024 PRAMEF13Q5VWM6 474 aa9.71□□□□□ -0.86
SMARCE1-206ENST00000447024 ALG1LQ6GMV1 187 aa9.71□□□□□ -0.86
SMARCE1-206ENST00000447024 LILRA6Q6PI73 481 aa9.71□□□□□ -0.86
SMARCE1-206ENST00000447024 SLC4A10Q6U841 1118 aa9.71□□□□□ -0.86
SMARCE1-206ENST00000447024 USP50Q70EL3 339 aaPredicted RBP9.71□□□□□ -0.86
SMARCE1-206ENST00000447024 MPHOSPH8Q99549 860 aa9.71□□□□□ -0.86
SMARCE1-206ENST00000447024 ARID3AQ99856 593 aa9.71□□□□□ -0.86
SMARCE1-206ENST00000447024 API5Q9BZZ5 524 aaKnown RBP9.71□□□□□ -0.86
SMARCE1-206ENST00000447024 C12orf49Q9H741 205 aa9.71□□□□□ -0.86
SMARCE1-206ENST00000447024 ZSWIM5Q9P217 1185 aa9.71□□□□□ -0.86
SMARCE1-206ENST00000447024 POLLQ9UGP5 575 aa9.71□□□□□ -0.86
SMARCE1-206ENST00000447024 MINPP1Q9UNW1 487 aa9.71□□□□□ -0.86
SMARCE1-206ENST00000447024 SNCAIPQ9Y6H5 919 aa9.71□□□□□ -0.86
SMARCE1-206ENST00000447024 ZNF609O15014 1411 aa9.71□□□□□ -0.86
SMARCE1-206ENST00000447024 UFL1O94874 794 aa9.7□□□□□ -0.86
SMARCE1-206ENST00000447024 CST3P01034 146 aaPredicted RBP9.7□□□□□ -0.86
SMARCE1-206ENST00000447024 USP17L7P0C7H9 530 aa9.7□□□□□ -0.86
SMARCE1-206ENST00000447024 RARSP54136 660 aaKnown RBP9.7□□□□□ -0.86
SMARCE1-206ENST00000447024 FOXO4P98177 505 aa9.7□□□□□ -0.86
SMARCE1-206ENST00000447024 CCDC57Q2TAC2 916 aa9.7□□□□□ -0.86
SMARCE1-206ENST00000447024 JARID2Q92833 1246 aaPredicted RBP9.7□□□□□ -0.86
SMARCE1-206ENST00000447024 EPB41L4BQ9H329 900 aa9.7□□□□□ -0.86
SMARCE1-206ENST00000447024 GPRC5DQ9NZD1 345 aa9.7□□□□□ -0.86
SMARCE1-206ENST00000447024 FAM8A1Q9UBU6 413 aa9.7□□□□□ -0.86
SMARCE1-206ENST00000447024 MED23Q9ULK4 1368 aa9.7□□□□□ -0.86
SMARCE1-206ENST00000447024 COL4A5P29400 1685 aa9.7□□□□□ -0.86
SMARCE1-206ENST00000447024 CEP350Q5VT06 3117 aa9.69□□□□□ -0.86
SMARCE1-206ENST00000447024 NPIPB6E9PJ23 425 aa9.69□□□□□ -0.86
SMARCE1-206ENST00000447024 TNK2Q07912 1038 aa9.69□□□□□ -0.86
SMARCE1-206ENST00000447024 RABL6Q3YEC7 729 aaPredicted RBP9.69□□□□□ -0.86
SMARCE1-206ENST00000447024 ZBED9Q6R2W3 1325 aa9.69□□□□□ -0.86
SMARCE1-206ENST00000447024 LMBR1LQ6UX01 489 aa9.69□□□□□ -0.86
SMARCE1-206ENST00000447024 C15orf52Q6ZUT6 534 aaKnown RBP9.69□□□□□ -0.86
SMARCE1-206ENST00000447024 TTC6Q86TZ1 520 aa9.69□□□□□ -0.86
SMARCE1-206ENST00000447024 ABHD4Q8TB40 342 aa9.69□□□□□ -0.86
SMARCE1-206ENST00000447024 CD320Q9NPF0 282 aa9.69□□□□□ -0.86
SMARCE1-206ENST00000447024 DCP1AQ9NPI6 582 aaPredicted RBP9.69□□□□□ -0.86
SMARCE1-206ENST00000447024 ADARB2Q9NS39 739 aaKnown RBP9.69□□□□□ -0.86
SMARCE1-206ENST00000447024 DNAJC25-GNG10A0A024R161 153 aa9.68□□□□□ -0.86
SMARCE1-206ENST00000447024 ECE2O60344 883 aa9.68□□□□□ -0.86
SMARCE1-206ENST00000447024 VIL1P09327 827 aaKnown RBP9.68□□□□□ -0.86
SMARCE1-206ENST00000447024 TMEM253P0C7T8 217 aa9.68□□□□□ -0.86
SMARCE1-206ENST00000447024 RAC2P15153 192 aa9.68□□□□□ -0.86
SMARCE1-206ENST00000447024 GRK4P32298 578 aa9.68□□□□□ -0.86
SMARCE1-206ENST00000447024 KIR3DL1P43629 444 aa9.68□□□□□ -0.86
SMARCE1-206ENST00000447024 RALGPS1Q5JS13 557 aa9.68□□□□□ -0.86
SMARCE1-206ENST00000447024 AGBL3Q8NEM8 1001 aa9.68□□□□□ -0.86
SMARCE1-206ENST00000447024 COX4I2Q96KJ9 171 aa9.68□□□□□ -0.86
SMARCE1-206ENST00000447024 COA1Q9GZY4 146 aa9.68□□□□□ -0.86
SMARCE1-206ENST00000447024 YDJCA8MPS7 323 aa9.67□□□□□ -0.86
SMARCE1-206ENST00000447024 H7C1D1 291 aa9.67□□□□□ -0.86
SMARCE1-206ENST00000447024 CYP7A1P22680 504 aa9.67□□□□□ -0.86
SMARCE1-206ENST00000447024 GMPSP49915 693 aaPredicted RBP9.67□□□□□ -0.86
SMARCE1-206ENST00000447024 ERVFC1P60507 584 aa9.67□□□□□ -0.86
SMARCE1-206ENST00000447024 TAF7LQ5H9L4 462 aa9.67□□□□□ -0.86
SMARCE1-206ENST00000447024 TTBK2Q6IQ55 1244 aa9.67□□□□□ -0.86
SMARCE1-206ENST00000447024 LDHAL6AQ6ZMR3 332 aa9.67□□□□□ -0.86
SMARCE1-206ENST00000447024 SV2BQ7L1I2 683 aa9.67□□□□□ -0.86
SMARCE1-206ENST00000447024 BCL2L13Q9BXK5 485 aa9.67□□□□□ -0.86
SMARCE1-206ENST00000447024 USP44Q9H0E7 712 aa9.67□□□□□ -0.86
SMARCE1-206ENST00000447024 PGAP2Q9UHJ9 254 aa9.67□□□□□ -0.86
SMARCE1-206ENST00000447024 TMEM59LQ9UK28 342 aa9.67□□□□□ -0.86
SMARCE1-206ENST00000447024 ADAMTSL1Q8N6G6 1762 aa9.66□□□□□ -0.86
SMARCE1-206ENST00000447024 ZNF804BA4D1E1 1349 aa9.66□□□□□ -0.86
SMARCE1-206ENST00000447024 MYO3BQ8WXR4 1341 aa9.66□□□□□ -0.86
SMARCE1-206ENST00000447024 PSMD14O00487 310 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms