RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 DDX41Q9UJV9 622 aaKnown RBP13.45□□□□□ -0.26
TCOF1-205ENST00000439160 COMMD10Q9Y6G5 202 aa13.45□□□□□ -0.26
TCOF1-205ENST00000439160 M0QZ92 97 aa13.45□□□□□ -0.26
TCOF1-205ENST00000439160 RASA3Q14644 834 aa13.45□□□□□ -0.26
TCOF1-205ENST00000439160 LONRF2Q1L5Z9 754 aa13.45□□□□□ -0.26
TCOF1-205ENST00000439160 SNRNP48Q6IEG0 339 aaKnown RBP13.45□□□□□ -0.26
TCOF1-205ENST00000439160 METTL16Q86W50 562 aaKnown RBP13.45□□□□□ -0.26
TCOF1-205ENST00000439160 FAM76AQ8TAV0 307 aa13.45□□□□□ -0.26
TCOF1-205ENST00000439160 MMS19Q96T76 1030 aa13.45□□□□□ -0.26
TCOF1-205ENST00000439160 ADPGKQ9BRR6 497 aa13.45□□□□□ -0.26
TCOF1-205ENST00000439160 KCNK9Q9NPC2 374 aa13.45□□□□□ -0.26
TCOF1-205ENST00000439160 POLLQ9UGP5 575 aa13.45□□□□□ -0.26
TCOF1-205ENST00000439160 GPR75-ASB3A0A0A6YYF3 556 aa13.45□□□□□ -0.26
TCOF1-205ENST00000439160 TMOD1P28289 359 aa13.45□□□□□ -0.26
TCOF1-205ENST00000439160 ZBED6P86452 979 aa13.45□□□□□ -0.26
TCOF1-205ENST00000439160 LRRC63Q05C16 580 aa13.45□□□□□ -0.26
TCOF1-205ENST00000439160 MTMR1Q13613 665 aa13.45□□□□□ -0.26
TCOF1-205ENST00000439160 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.45□□□□□ -0.26
TCOF1-205ENST00000439160 NDUFB10O96000 172 aa13.44□□□□□ -0.26
TCOF1-205ENST00000439160 PDE6CP51160 858 aa13.44□□□□□ -0.26
TCOF1-205ENST00000439160 YARSP54577 528 aaKnown RBP13.44□□□□□ -0.26
TCOF1-205ENST00000439160 ARMC9Q7Z3E5 817 aa13.44□□□□□ -0.26
TCOF1-205ENST00000439160 ARFGAP2Q8N6H7 521 aa13.44□□□□□ -0.26
TCOF1-205ENST00000439160 PRPF38AQ8NAV1 312 aaKnown RBP13.44□□□□□ -0.26
TCOF1-205ENST00000439160 GCNT4Q9P109 453 aa13.44□□□□□ -0.26
TCOF1-205ENST00000439160 ABCB11O95342 1321 aa13.44□□□□□ -0.26
TCOF1-205ENST00000439160 TROAPQ12815 778 aa13.44□□□□□ -0.26
TCOF1-205ENST00000439160 MIS18BP1Q6P0N0 1132 aa13.44□□□□□ -0.26
TCOF1-205ENST00000439160 C16orf86Q6ZW13 317 aa13.44□□□□□ -0.26
TCOF1-205ENST00000439160 GPR161Q8N6U8 529 aaKnown RBP13.44□□□□□ -0.26
TCOF1-205ENST00000439160 BANK1Q8NDB2 785 aa13.44□□□□□ -0.26
TCOF1-205ENST00000439160 NT5C1BQ96P26 610 aa13.44□□□□□ -0.26
TCOF1-205ENST00000439160 PSMD1Q99460 953 aa13.44□□□□□ -0.26
TCOF1-205ENST00000439160 RNF146Q9NTX7 359 aa13.44□□□□□ -0.26
TCOF1-205ENST00000439160 FEM1BQ9UK73 627 aa13.44□□□□□ -0.26
TCOF1-205ENST00000439160 TCP1P17987 556 aaKnown RBP13.44□□□□□ -0.26
TCOF1-205ENST00000439160 PEX3P56589 373 aa13.44□□□□□ -0.26
TCOF1-205ENST00000439160 PPP2R5AQ15172 486 aa13.44□□□□□ -0.26
TCOF1-205ENST00000439160 CCDC144BQ3MJ40 725 aa13.44□□□□□ -0.26
TCOF1-205ENST00000439160 HHIPL2Q6UWX4 724 aa13.44□□□□□ -0.26
TCOF1-205ENST00000439160 SFR1Q86XK3 245 aa13.44□□□□□ -0.26
TCOF1-205ENST00000439160 COL23A1Q86Y22 540 aaPredicted RBP13.44□□□□□ -0.26
TCOF1-205ENST00000439160 SPC25Q9HBM1 224 aa13.44□□□□□ -0.26
TCOF1-205ENST00000439160 GOLGA8IPA6NC78 632 aa13.44□□□□□ -0.26
TCOF1-205ENST00000439160 GOLGA8JA6NMD2 632 aa13.44□□□□□ -0.26
TCOF1-205ENST00000439160 TNNC2P02585 160 aa13.44□□□□□ -0.26
TCOF1-205ENST00000439160 OSBPP22059 807 aa13.44□□□□□ -0.26
TCOF1-205ENST00000439160 NAA35Q5VZE5 725 aa13.44□□□□□ -0.26
TCOF1-205ENST00000439160 DEFB132Q7Z7B7 95 aa13.44□□□□□ -0.26
TCOF1-205ENST00000439160 ADGRA1Q86SQ6 560 aa13.44□□□□□ -0.26
TCOF1-205ENST00000439160 RNF34Q969K3 372 aa13.44□□□□□ -0.26
TCOF1-205ENST00000439160 RIOK1Q9BRS2 568 aaKnown RBP13.44□□□□□ -0.26
TCOF1-205ENST00000439160 STMN4Q9H169 189 aaPredicted RBP13.44□□□□□ -0.26
TCOF1-205ENST00000439160 EIF4A3P38919 411 aaKnown RBP13.43□□□□□ -0.26
TCOF1-205ENST00000439160 R3HDM1Q15032 1099 aaKnown RBP13.43□□□□□ -0.26
TCOF1-205ENST00000439160 TAF12Q16514 161 aa13.43□□□□□ -0.26
TCOF1-205ENST00000439160 PPP1R18Q6NYC8 613 aa13.43□□□□□ -0.26
TCOF1-205ENST00000439160 MB21D1Q8N884 522 aa13.43□□□□□ -0.26
TCOF1-205ENST00000439160 KCNB2Q92953 911 aa13.43□□□□□ -0.26
TCOF1-205ENST00000439160 SLC10A4Q96EP9 437 aa13.43□□□□□ -0.26
TCOF1-205ENST00000439160 FAM20AQ96MK3 541 aa13.43□□□□□ -0.26
TCOF1-205ENST00000439160 KRIT1O00522 736 aa13.43□□□□□ -0.26
TCOF1-205ENST00000439160 GFPT2O94808 682 aa13.43□□□□□ -0.26
TCOF1-205ENST00000439160 MARK3P27448 753 aa13.43□□□□□ -0.26
TCOF1-205ENST00000439160 PAK2Q13177 524 aa13.43□□□□□ -0.26
TCOF1-205ENST00000439160 TMEM206Q9H813 350 aa13.43□□□□□ -0.26
TCOF1-205ENST00000439160 PDHBP11177 359 aa13.43□□□□□ -0.26
TCOF1-205ENST00000439160 EZH2Q15910 746 aaKnown RBP13.43□□□□□ -0.26
TCOF1-205ENST00000439160 RAD54LQ92698 747 aa13.43□□□□□ -0.26
TCOF1-205ENST00000439160 RNF181Q9P0P0 153 aa13.43□□□□□ -0.26
TCOF1-205ENST00000439160 CDC23Q9UJX2 597 aa13.43□□□□□ -0.26
TCOF1-205ENST00000439160 GOLGA6BA6NDN3 693 aa13.43□□□□□ -0.26
TCOF1-205ENST00000439160 EFCAB8A8MWE9 144 aa13.43□□□□□ -0.26
TCOF1-205ENST00000439160 NDUFA10O95299 355 aa13.43□□□□□ -0.26
TCOF1-205ENST00000439160 PIK3CAP42336 1068 aa13.43□□□□□ -0.26
TCOF1-205ENST00000439160 NBPF11Q86T75 865 aa13.43□□□□□ -0.26
TCOF1-205ENST00000439160 RPGRIP1Q96KN7 1286 aa13.43□□□□□ -0.26
TCOF1-205ENST00000439160 PPP1R16BQ96T49 567 aa13.43□□□□□ -0.26
TCOF1-205ENST00000439160 APOL6Q9BWW8 343 aa13.43□□□□□ -0.26
TCOF1-205ENST00000439160 AKT3Q9Y243 479 aa13.43□□□□□ -0.26
TCOF1-205ENST00000439160 TEX33O43247 280 aa13.42□□□□□ -0.26
TCOF1-205ENST00000439160 VPS41P49754 854 aa13.42□□□□□ -0.26
TCOF1-205ENST00000439160 GUCY2FP51841 1108 aa13.42□□□□□ -0.26
TCOF1-205ENST00000439160 UAP1Q16222 522 aaPredicted RBP13.42□□□□□ -0.26
TCOF1-205ENST00000439160 OTUD6BQ8N6M0 293 aa13.42□□□□□ -0.26
TCOF1-205ENST00000439160 DYDC2Q96IM9 177 aa13.42□□□□□ -0.26
TCOF1-205ENST00000439160 PLCD4Q9BRC7 762 aa13.42□□□□□ -0.26
TCOF1-205ENST00000439160 MFAP3LO75121 409 aa13.42□□□□□ -0.26
TCOF1-205ENST00000439160 IFNB1P01574 187 aa13.42□□□□□ -0.26
TCOF1-205ENST00000439160 PSAPP07602 524 aa13.42□□□□□ -0.26
TCOF1-205ENST00000439160 P4HA1P13674 534 aa13.42□□□□□ -0.26
TCOF1-205ENST00000439160 OSTNP61366 133 aa13.42□□□□□ -0.26
TCOF1-205ENST00000439160 LLGL1Q15334 1064 aa13.42□□□□□ -0.26
TCOF1-205ENST00000439160 CPLX4Q7Z7G2 160 aa13.42□□□□□ -0.26
TCOF1-205ENST00000439160 LDHDQ86WU2 507 aa13.42□□□□□ -0.26
TCOF1-205ENST00000439160 MICALL2Q8IY33 904 aa13.42□□□□□ -0.26
TCOF1-205ENST00000439160 PROCA1Q8NCQ7 364 aaPredicted RBP13.42□□□□□ -0.26
TCOF1-205ENST00000439160 LRRC45Q96CN5 670 aa13.42□□□□□ -0.26
TCOF1-205ENST00000439160 NHEJ1Q9H9Q4 299 aaPredicted RBP13.42□□□□□ -0.26
TCOF1-205ENST00000439160 ADAMTS1Q9UHI8 967 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms