RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 LCORQ96JN0 433 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P18-201ENST00000438801 C8orf49Q96NF6 230 aa4.79□□□□□ -1.64
HMGB1P18-201ENST00000438801 DTLQ9NZJ0 730 aa4.79□□□□□ -1.64
HMGB1P18-201ENST00000438801 PRKAG3Q9UGI9 489 aa4.79□□□□□ -1.64
HMGB1P18-201ENST00000438801 PCDHB4Q9Y5E5 795 aa4.79□□□□□ -1.64
HMGB1P18-201ENST00000438801 RIMS1Q86UR5 1692 aaKnown RBP4.79□□□□□ -1.64
HMGB1P18-201ENST00000438801 TCRBV5S2A0A599 114 aa4.78□□□□□ -1.64
HMGB1P18-201ENST00000438801 C9orf118A6NHY6 69 aa4.78□□□□□ -1.64
HMGB1P18-201ENST00000438801 TOM1O60784 492 aa4.78□□□□□ -1.64
HMGB1P18-201ENST00000438801 TADA3O75528 432 aa4.78□□□□□ -1.64
HMGB1P18-201ENST00000438801 DGKIO75912 1065 aa4.78□□□□□ -1.64
HMGB1P18-201ENST00000438801 ETFBP38117 255 aa4.78□□□□□ -1.64
HMGB1P18-201ENST00000438801 EMC4Q5J8M3 183 aa4.78□□□□□ -1.64
HMGB1P18-201ENST00000438801 MRM1Q6IN84 353 aaKnown RBP4.78□□□□□ -1.64
HMGB1P18-201ENST00000438801 DENND5AQ6IQ26 1287 aa4.78□□□□□ -1.64
HMGB1P18-201ENST00000438801 TMEM145Q8NBT3 493 aa4.78□□□□□ -1.64
HMGB1P18-201ENST00000438801 ARRDC4Q8NCT1 418 aa4.78□□□□□ -1.64
HMGB1P18-201ENST00000438801 MICAL1Q8TDZ2 1067 aa4.78□□□□□ -1.64
HMGB1P18-201ENST00000438801 ZSWIM3Q96MP5 696 aa4.78□□□□□ -1.64
HMGB1P18-201ENST00000438801 CLIC6Q96NY7 704 aa4.78□□□□□ -1.64
HMGB1P18-201ENST00000438801 KRTAP3-1Q9BYR8 98 aa4.78□□□□□ -1.64
HMGB1P18-201ENST00000438801 CLDND1Q9NY35 253 aa4.78□□□□□ -1.64
HMGB1P18-201ENST00000438801 CYP1A1P04798 512 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P18-201ENST00000438801 ERCC5P28715 1186 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P18-201ENST00000438801 IL13P35225 146 aa4.77□□□□□ -1.65
HMGB1P18-201ENST00000438801 SURF1Q15526 300 aa4.77□□□□□ -1.65
HMGB1P18-201ENST00000438801 TEPPQ6URK8 271 aa4.77□□□□□ -1.65
HMGB1P18-201ENST00000438801 GLB1LQ6UWU2 654 aa4.77□□□□□ -1.65
HMGB1P18-201ENST00000438801 CHST13Q8NET6 341 aa4.77□□□□□ -1.65
HMGB1P18-201ENST00000438801 C1orf159Q96HA4 380 aa4.77□□□□□ -1.65
HMGB1P18-201ENST00000438801 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.77□□□□□ -1.65
HMGB1P18-201ENST00000438801 SSBP3Q9BWW4 388 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P18-201ENST00000438801 C1QTNF3Q9BXJ4 246 aa4.77□□□□□ -1.65
HMGB1P18-201ENST00000438801 EPB41L1Q9H4G0 881 aa4.77□□□□□ -1.65
HMGB1P18-201ENST00000438801 L2HGDHQ9H9P8 463 aa4.77□□□□□ -1.65
HMGB1P18-201ENST00000438801 NPFFR2Q9Y5X5 522 aa4.77□□□□□ -1.65
HMGB1P18-201ENST00000438801 URB2Q14146 1524 aaKnown RBP4.77□□□□□ -1.65
HMGB1P18-201ENST00000438801 ATAD2BQ9ULI0 1458 aa4.76□□□□□ -1.65
HMGB1P18-201ENST00000438801 B4GALT3O60512 393 aa4.76□□□□□ -1.65
HMGB1P18-201ENST00000438801 CYP7B1O75881 506 aa4.76□□□□□ -1.65
HMGB1P18-201ENST00000438801 LRG1P02750 347 aa4.76□□□□□ -1.65
HMGB1P18-201ENST00000438801 CAPNS1P04632 268 aa4.76□□□□□ -1.65
HMGB1P18-201ENST00000438801 ZNF20P17024 532 aa4.76□□□□□ -1.65
HMGB1P18-201ENST00000438801 TNFRSF1AP19438 455 aa4.76□□□□□ -1.65
HMGB1P18-201ENST00000438801 GNL2Q13823 731 aaKnown RBP4.76□□□□□ -1.65
HMGB1P18-201ENST00000438801 SLC35F1Q5T1Q4 408 aa4.76□□□□□ -1.65
HMGB1P18-201ENST00000438801 EEPD1Q7L9B9 569 aa4.76□□□□□ -1.65
HMGB1P18-201ENST00000438801 LIMS2Q7Z4I7 341 aa4.76□□□□□ -1.65
HMGB1P18-201ENST00000438801 PLEKHH3Q7Z736 793 aa4.76□□□□□ -1.65
HMGB1P18-201ENST00000438801 PHOSPHO1Q8TCT1 267 aa4.76□□□□□ -1.65
HMGB1P18-201ENST00000438801 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.76□□□□□ -1.65
HMGB1P18-201ENST00000438801 YTHDC1Q96MU7 727 aaKnown RBP4.76□□□□□ -1.65
HMGB1P18-201ENST00000438801 TMEM209Q96SK2 561 aa4.76□□□□□ -1.65
HMGB1P18-201ENST00000438801 TMEM168Q9H0V1 697 aa4.76□□□□□ -1.65
HMGB1P18-201ENST00000438801 EPN3Q9H201 632 aa4.76□□□□□ -1.65
HMGB1P18-201ENST00000438801 MYOTQ9UBF9 498 aa4.76□□□□□ -1.65
HMGB1P18-201ENST00000438801 CROTQ9UKG9 612 aa4.76□□□□□ -1.65
HMGB1P18-201ENST00000438801 C1QTNF3-AMACRE9PGA6 284 aa4.75□□□□□ -1.65
HMGB1P18-201ENST00000438801 AGRPO00253 132 aa4.75□□□□□ -1.65
HMGB1P18-201ENST00000438801 MATN3O15232 486 aa4.75□□□□□ -1.65
HMGB1P18-201ENST00000438801 LAMTOR5O43504 91 aa4.75□□□□□ -1.65
HMGB1P18-201ENST00000438801 MAFKO60675 156 aa4.75□□□□□ -1.65
HMGB1P18-201ENST00000438801 GJB6O95452 261 aa4.75□□□□□ -1.65
HMGB1P18-201ENST00000438801 GRIA2P42262 883 aa4.75□□□□□ -1.65
HMGB1P18-201ENST00000438801 MLLT6P55198 1093 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P18-201ENST00000438801 PPP2R2AP63151 447 aa4.75□□□□□ -1.65
HMGB1P18-201ENST00000438801 MAP4K2Q12851 820 aa4.75□□□□□ -1.65
HMGB1P18-201ENST00000438801 SLC10A6Q3KNW5 377 aa4.75□□□□□ -1.65
HMGB1P18-201ENST00000438801 KCTD13Q8WZ19 329 aa4.75□□□□□ -1.65
HMGB1P18-201ENST00000438801 MBD6Q96DN6 1003 aa4.75□□□□□ -1.65
HMGB1P18-201ENST00000438801 SMOC1Q9H4F8 434 aa4.75□□□□□ -1.65
HMGB1P18-201ENST00000438801 ZNF408Q9H9D4 720 aa4.75□□□□□ -1.65
HMGB1P18-201ENST00000438801 PPP4R1LQ9P1A2 415 aa4.75□□□□□ -1.65
HMGB1P18-201ENST00000438801 ST6GALNAC2Q9UJ37 374 aa4.75□□□□□ -1.65
HMGB1P18-201ENST00000438801 CADPSQ9ULU8 1353 aa4.75□□□□□ -1.65
HMGB1P18-201ENST00000438801 KRIT1O00522 736 aa4.74□□□□□ -1.65
HMGB1P18-201ENST00000438801 FGRP09769 529 aa4.74□□□□□ -1.65
HMGB1P18-201ENST00000438801 ZXDAP98168 799 aa4.74□□□□□ -1.65
HMGB1P18-201ENST00000438801 ZCCHC14Q8WYQ9 949 aaKnown RBP4.74□□□□□ -1.65
HMGB1P18-201ENST00000438801 DVL3Q92997 716 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P18-201ENST00000438801 WRNIP1Q96S55 665 aa4.74□□□□□ -1.65
HMGB1P18-201ENST00000438801 IER2Q9BTL4 223 aa4.74□□□□□ -1.65
HMGB1P18-201ENST00000438801 JAM3Q9BX67 310 aa4.74□□□□□ -1.65
HMGB1P18-201ENST00000438801 CDIP1Q9H305 208 aa4.74□□□□□ -1.65
HMGB1P18-201ENST00000438801 SLC6A20Q9NP91 592 aa4.74□□□□□ -1.65
HMGB1P18-201ENST00000438801 GPR27Q9NS67 375 aa4.74□□□□□ -1.65
HMGB1P18-201ENST00000438801 HSPBP1Q9NZL4 362 aa4.74□□□□□ -1.65
HMGB1P18-201ENST00000438801 ASH2LQ9UBL3 628 aa4.74□□□□□ -1.65
HMGB1P18-201ENST00000438801 WASF3Q9UPY6 502 aa4.74□□□□□ -1.65
HMGB1P18-201ENST00000438801 FANCD2Q9BXW9 1451 aa4.74□□□□□ -1.65
HMGB1P18-201ENST00000438801 TNS2Q63HR2 1409 aa4.73□□□□□ -1.65
HMGB1P18-201ENST00000438801 A0A1W2PQU0 124 aa4.73□□□□□ -1.65
HMGB1P18-201ENST00000438801 MSCO60682 206 aa4.73□□□□□ -1.65
HMGB1P18-201ENST00000438801 CYP4F22Q6NT55 531 aa4.73□□□□□ -1.65
HMGB1P18-201ENST00000438801 TRMT10BQ6PF06 316 aaKnown RBP4.73□□□□□ -1.65
HMGB1P18-201ENST00000438801 TMC5Q6UXY8 1006 aa4.73□□□□□ -1.65
HMGB1P18-201ENST00000438801 TRIM48Q8IWZ4 208 aa4.73□□□□□ -1.65
HMGB1P18-201ENST00000438801 FTSJ1Q9UET6 329 aa4.73□□□□□ -1.65
HMGB1P18-201ENST00000438801 R3HCC1Q9Y3T6 440 aaKnown RBP4.73□□□□□ -1.65
HMGB1P18-201ENST00000438801 AQRO60306 1485 aaKnown RBP eCLIP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms