RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 CIAPIN1Q6FI81 312 aa12.08□□□□□ -0.48
SCN4A-201ENST00000435607 ASIC4Q96FT7 647 aa12.08□□□□□ -0.48
SCN4A-201ENST00000435607 LUC7L3O95232 432 aaKnown RBP12.08□□□□□ -0.48
SCN4A-201ENST00000435607 FOPNLQ96NB1 174 aa12.08□□□□□ -0.48
SCN4A-201ENST00000435607 KIF2CQ99661 725 aa12.08□□□□□ -0.48
SCN4A-201ENST00000435607 NXF1Q9UBU9 619 aaKnown RBP12.08□□□□□ -0.48
SCN4A-201ENST00000435607 ALDH1A1P00352 501 aa12.07□□□□□ -0.48
SCN4A-201ENST00000435607 PGBD3Q8N328 593 aa12.07□□□□□ -0.48
SCN4A-201ENST00000435607 ZBTB38Q8NAP3 1195 aaPredicted RBP12.07□□□□□ -0.48
SCN4A-201ENST00000435607 TSSK1BQ9BXA7 367 aa12.07□□□□□ -0.48
SCN4A-201ENST00000435607 STRIP2Q9ULQ0 834 aa12.07□□□□□ -0.48
SCN4A-201ENST00000435607 CFAP36Q96G28 342 aa12.07□□□□□ -0.48
SCN4A-201ENST00000435607 FAM167AQ96KS9 214 aa12.07□□□□□ -0.48
SCN4A-201ENST00000435607 hCG_1984214I3L0E3 225 aa12.07□□□□□ -0.48
SCN4A-201ENST00000435607 ANP32DO95626 131 aa12.07□□□□□ -0.48
SCN4A-201ENST00000435607 RRM2BQ7LG56 351 aa12.07□□□□□ -0.48
SCN4A-201ENST00000435607 FSD1LQ9BXM9 530 aa12.07□□□□□ -0.48
SCN4A-201ENST00000435607 CALN1Q9BXU9 219 aa12.07□□□□□ -0.48
SCN4A-201ENST00000435607 FBXO40Q9UH90 709 aa12.07□□□□□ -0.48
SCN4A-201ENST00000435607 PACSIN2Q9UNF0 486 aaPredicted RBP12.07□□□□□ -0.48
SCN4A-201ENST00000435607 MEIS1O00470 390 aa12.07□□□□□ -0.48
SCN4A-201ENST00000435607 SUN1O94901 812 aa12.07□□□□□ -0.48
SCN4A-201ENST00000435607 BMP3P12645 472 aa12.07□□□□□ -0.48
SCN4A-201ENST00000435607 OR6B2Q6IFH4 312 aa12.07□□□□□ -0.48
SCN4A-201ENST00000435607 STAG1Q8WVM7 1258 aa12.07□□□□□ -0.48
SCN4A-201ENST00000435607 PBXIP1Q96AQ6 731 aa12.07□□□□□ -0.48
SCN4A-201ENST00000435607 ULK4Q96C45 1275 aa12.07□□□□□ -0.48
SCN4A-201ENST00000435607 GPBP1L1Q9HC44 474 aaPredicted RBP12.07□□□□□ -0.48
SCN4A-201ENST00000435607 KIAA1024Q9UPX6 916 aa12.07□□□□□ -0.48
SCN4A-201ENST00000435607 ZMYM3Q14202 1370 aa12.07□□□□□ -0.48
SCN4A-201ENST00000435607 LDHAP00338 332 aaKnown RBP12.07□□□□□ -0.48
SCN4A-201ENST00000435607 GUCY2FP51841 1108 aa12.07□□□□□ -0.48
SCN4A-201ENST00000435607 MKRN3Q13064 507 aaKnown RBP12.07□□□□□ -0.48
SCN4A-201ENST00000435607 SH3TC2Q8TF17 1288 aa12.07□□□□□ -0.48
SCN4A-201ENST00000435607 KDM4CQ9H3R0 1056 aa12.07□□□□□ -0.48
SCN4A-201ENST00000435607 ACCSLQ4AC99 568 aa12.07□□□□□ -0.48
SCN4A-201ENST00000435607 ZBTB41Q5SVQ8 909 aa12.07□□□□□ -0.48
SCN4A-201ENST00000435607 GJA10Q969M2 543 aa12.07□□□□□ -0.48
SCN4A-201ENST00000435607 IGHDP01880 384 aa12.06□□□□□ -0.48
SCN4A-201ENST00000435607 BLVRAP53004 296 aa12.06□□□□□ -0.48
SCN4A-201ENST00000435607 MTX1Q13505 466 aa12.06□□□□□ -0.48
SCN4A-201ENST00000435607 MESDQ14696 234 aa12.06□□□□□ -0.48
SCN4A-201ENST00000435607 SDE2Q6IQ49 451 aa12.06□□□□□ -0.48
SCN4A-201ENST00000435607 AK8Q96MA6 479 aa12.06□□□□□ -0.48
SCN4A-201ENST00000435607 CARD6Q9BX69 1037 aa12.06□□□□□ -0.48
SCN4A-201ENST00000435607 ASPSCR1Q9BZE9 553 aa12.06□□□□□ -0.48
SCN4A-201ENST00000435607 LCMT1Q9UIC8 334 aa12.06□□□□□ -0.48
SCN4A-201ENST00000435607 GOLGA8SH3BPF8 625 aa12.06□□□□□ -0.48
SCN4A-201ENST00000435607 MORC4Q8TE76 937 aa12.06□□□□□ -0.48
SCN4A-201ENST00000435607 RGL1Q9NZL6 768 aa12.06□□□□□ -0.48
SCN4A-201ENST00000435607 MED21Q13503 144 aa12.06□□□□□ -0.48
SCN4A-201ENST00000435607 KIF19Q2TAC6 998 aa12.06□□□□□ -0.48
SCN4A-201ENST00000435607 RAET1EQ8TD07 263 aa12.06□□□□□ -0.48
SCN4A-201ENST00000435607 HMGXB3Q12766 1538 aa12.06□□□□□ -0.48
SCN4A-201ENST00000435607 KRT1P04264 644 aa12.06□□□□□ -0.48
SCN4A-201ENST00000435607 PYGBP11216 843 aa12.06□□□□□ -0.48
SCN4A-201ENST00000435607 CYP4A11Q02928 519 aa12.06□□□□□ -0.48
SCN4A-201ENST00000435607 DEUP1Q05D60 604 aa12.06□□□□□ -0.48
SCN4A-201ENST00000435607 OR9Q1Q8NGQ5 310 aa12.06□□□□□ -0.48
SCN4A-201ENST00000435607 NLRP4Q96MN2 994 aa12.06□□□□□ -0.48
SCN4A-201ENST00000435607 FIS1Q9Y3D6 152 aa12.06□□□□□ -0.48
SCN4A-201ENST00000435607 MED23Q9ULK4 1368 aa12.06□□□□□ -0.48
SCN4A-201ENST00000435607 hCG_1642624A0A1W2PR95 340 aa12.06□□□□□ -0.48
SCN4A-201ENST00000435607 ZNF197O14709 1029 aa12.06□□□□□ -0.48
SCN4A-201ENST00000435607 CYBBP04839 570 aa12.06□□□□□ -0.48
SCN4A-201ENST00000435607 TWF2Q6IBS0 349 aaKnown RBP12.06□□□□□ -0.48
SCN4A-201ENST00000435607 PLEKHM2Q8IWE5 1019 aa12.06□□□□□ -0.48
SCN4A-201ENST00000435607 IFNL3Q8IZI9 196 aa12.06□□□□□ -0.48
SCN4A-201ENST00000435607 ZBTB9Q96C00 473 aa12.06□□□□□ -0.48
SCN4A-201ENST00000435607 PI4KBQ9UBF8 816 aa12.06□□□□□ -0.48
SCN4A-201ENST00000435607 E5RI56 91 aa12.06□□□□□ -0.48
SCN4A-201ENST00000435607 GTPBP6O43824 516 aaPredicted RBP12.06□□□□□ -0.48
SCN4A-201ENST00000435607 VAMP4O75379 141 aa12.06□□□□□ -0.48
SCN4A-201ENST00000435607 CCDC15Q0P6D6 951 aa12.06□□□□□ -0.48
SCN4A-201ENST00000435607 GTF2H3Q13889 308 aa12.06□□□□□ -0.48
SCN4A-201ENST00000435607 LONRF3Q496Y0 759 aa12.06□□□□□ -0.48
SCN4A-201ENST00000435607 SCN4BQ8IWT1 228 aa12.06□□□□□ -0.48
SCN4A-201ENST00000435607 AFG1LQ8WV93 481 aa12.06□□□□□ -0.48
SCN4A-201ENST00000435607 PRDM5Q9NQX1 630 aaPredicted RBP12.06□□□□□ -0.48
SCN4A-201ENST00000435607 TXLNGQ9NUQ3 528 aa12.06□□□□□ -0.48
SCN4A-201ENST00000435607 USP17L3A6NCW0 530 aa12.05□□□□□ -0.48
SCN4A-201ENST00000435607 USP17L4A6NCW7 530 aa12.05□□□□□ -0.48
SCN4A-201ENST00000435607 E7EWF7 191 aa12.05□□□□□ -0.48
SCN4A-201ENST00000435607 RCN2Q14257 317 aa12.05□□□□□ -0.48
SCN4A-201ENST00000435607 USP17L1Q7RTZ2 530 aa12.05□□□□□ -0.48
SCN4A-201ENST00000435607 NOSTRINQ8IVI9 506 aa12.05□□□□□ -0.48
SCN4A-201ENST00000435607 SLC26A7Q8TE54 656 aa12.05□□□□□ -0.48
SCN4A-201ENST00000435607 PDCD6IPQ8WUM4 868 aaKnown RBP12.05□□□□□ -0.48
SCN4A-201ENST00000435607 MAGOHBQ96A72 148 aaKnown RBP12.05□□□□□ -0.48
SCN4A-201ENST00000435607 MAP3K19Q56UN5 1328 aa12.05□□□□□ -0.48
SCN4A-201ENST00000435607 K7ERI5 159 aa12.05□□□□□ -0.48
SCN4A-201ENST00000435607 MTERF2Q49AM1 385 aa12.05□□□□□ -0.48
SCN4A-201ENST00000435607 KRT27Q7Z3Y8 459 aa12.05□□□□□ -0.48
SCN4A-201ENST00000435607 SPICE1Q8N0Z3 855 aa12.05□□□□□ -0.48
SCN4A-201ENST00000435607 NCLNQ969V3 563 aa12.05□□□□□ -0.48
SCN4A-201ENST00000435607 YIPF2Q9BWQ6 316 aa12.05□□□□□ -0.48
SCN4A-201ENST00000435607 MAGED2Q9UNF1 606 aaPredicted RBP12.05□□□□□ -0.48
SCN4A-201ENST00000435607 E9PMD0 336 aa12.05□□□□□ -0.48
SCN4A-201ENST00000435607 HUS1O60921 280 aa12.05□□□□□ -0.48
SCN4A-201ENST00000435607 EEF1DP29692 281 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms