RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 POLR3CQ9BUI4 534 aaPredicted RBP15.5■□□□□ 0.07
HOXC4-202ENST00000430889 TMEM39BQ9GZU3 492 aa15.5■□□□□ 0.07
HOXC4-202ENST00000430889 DDX41Q9UJV9 622 aaKnown RBP15.5■□□□□ 0.07
HOXC4-202ENST00000430889 LOXHD1Q8IVV2 1947 aa15.49■□□□□ 0.07
HOXC4-202ENST00000430889 NPHP3-ACAD11A0A0J9YXS1 232 aa15.49■□□□□ 0.07
HOXC4-202ENST00000430889 PES1O00541 588 aaKnown RBP15.49■□□□□ 0.07
HOXC4-202ENST00000430889 CAP2P40123 477 aa15.49■□□□□ 0.07
HOXC4-202ENST00000430889 PPP2R3AQ06190 1150 aa15.49■□□□□ 0.07
HOXC4-202ENST00000430889 TUBB2AQ13885 445 aa15.49■□□□□ 0.07
HOXC4-202ENST00000430889 FKBP15Q5T1M5 1219 aa15.49■□□□□ 0.07
HOXC4-202ENST00000430889 SLC35F6Q8N357 371 aa15.49■□□□□ 0.07
HOXC4-202ENST00000430889 OGFOD1Q8N543 542 aa15.49■□□□□ 0.07
HOXC4-202ENST00000430889 CYP2W1Q8TAV3 490 aa15.49■□□□□ 0.07
HOXC4-202ENST00000430889 SCFD1Q8WVM8 642 aa15.49■□□□□ 0.07
HOXC4-202ENST00000430889 CEP63Q96MT8 703 aa15.49■□□□□ 0.07
HOXC4-202ENST00000430889 TSG101Q99816 390 aa15.49■□□□□ 0.07
HOXC4-202ENST00000430889 WDR18Q9BV38 432 aa15.49■□□□□ 0.07
HOXC4-202ENST00000430889 TUBB2BQ9BVA1 445 aa15.49■□□□□ 0.07
HOXC4-202ENST00000430889 BMP2KQ9NSY1 1161 aaPredicted RBP15.49■□□□□ 0.07
HOXC4-202ENST00000430889 PARP14Q460N5 1801 aa15.49■□□□□ 0.07
HOXC4-202ENST00000430889 EPHB6O15197 1021 aa15.48■□□□□ 0.07
HOXC4-202ENST00000430889 TRIM21P19474 475 aaKnown RBP15.48■□□□□ 0.07
HOXC4-202ENST00000430889 PSMC6P62333 389 aa15.48■□□□□ 0.07
HOXC4-202ENST00000430889 FKBP3Q00688 224 aaKnown RBP15.48■□□□□ 0.07
HOXC4-202ENST00000430889 CXCL9Q07325 125 aa15.48■□□□□ 0.07
HOXC4-202ENST00000430889 GIT2Q14161 759 aa15.48■□□□□ 0.07
HOXC4-202ENST00000430889 ARHGAP29Q52LW3 1261 aa15.48■□□□□ 0.07
HOXC4-202ENST00000430889 ZNF569Q5MCW4 686 aa15.48■□□□□ 0.07
HOXC4-202ENST00000430889 EPM2AIP1Q7L775 607 aaPredicted RBP15.48■□□□□ 0.07
HOXC4-202ENST00000430889 CCDC170Q8IYT3 715 aa15.48■□□□□ 0.07
HOXC4-202ENST00000430889 KCTD17Q8N5Z5 321 aa15.48■□□□□ 0.07
HOXC4-202ENST00000430889 MNS1Q8NEH6 495 aa15.48■□□□□ 0.07
HOXC4-202ENST00000430889 ERMNQ8TAM6 284 aa15.48■□□□□ 0.07
HOXC4-202ENST00000430889 CHURC1Q8WUH1 139 aa15.48■□□□□ 0.07
HOXC4-202ENST00000430889 TBC1D5Q92609 795 aa15.48■□□□□ 0.07
HOXC4-202ENST00000430889 ZNF446Q9NWS9 450 aa15.48■□□□□ 0.07
HOXC4-202ENST00000430889 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.48■□□□□ 0.07
HOXC4-202ENST00000430889 EIF3CLB5ME19 914 aaKnown RBP15.48■□□□□ 0.07
HOXC4-202ENST00000430889 EML1O00423 815 aa15.48■□□□□ 0.07
HOXC4-202ENST00000430889 AMPD2Q01433 879 aa15.48■□□□□ 0.07
HOXC4-202ENST00000430889 NCAPH2Q6IBW4 605 aa15.48■□□□□ 0.07
HOXC4-202ENST00000430889 FAM160B2Q86V87 743 aa15.48■□□□□ 0.07
HOXC4-202ENST00000430889 NIM1KQ8IY84 436 aa15.48■□□□□ 0.07
HOXC4-202ENST00000430889 BAP1Q92560 729 aa15.48■□□□□ 0.07
HOXC4-202ENST00000430889 EIF3CQ99613 913 aaKnown RBP15.48■□□□□ 0.07
HOXC4-202ENST00000430889 HAUS4Q9H6D7 363 aa15.48■□□□□ 0.07
HOXC4-202ENST00000430889 CDC23Q9UJX2 597 aa15.48■□□□□ 0.07
HOXC4-202ENST00000430889 PLAGL2Q9UPG8 496 aa15.48■□□□□ 0.07
HOXC4-202ENST00000430889 COL4A3BPQ9Y5P4 624 aa15.48■□□□□ 0.07
HOXC4-202ENST00000430889 PHF20L1A8MW92 1017 aa15.47■□□□□ 0.07
HOXC4-202ENST00000430889 WNT10BO00744 389 aa15.47■□□□□ 0.07
HOXC4-202ENST00000430889 PSMD10O75832 226 aa15.47■□□□□ 0.07
HOXC4-202ENST00000430889 SSBP05455 408 aaKnown RBP eCLIP15.47■□□□□ 0.07
HOXC4-202ENST00000430889 PTGER2P43116 358 aa15.47■□□□□ 0.07
HOXC4-202ENST00000430889 ARHGAP27Q6ZUM4 889 aa15.47■□□□□ 0.07
HOXC4-202ENST00000430889 UBXN4Q92575 508 aa15.47■□□□□ 0.07
HOXC4-202ENST00000430889 SLC5A5Q92911 643 aa15.47■□□□□ 0.07
HOXC4-202ENST00000430889 PURBQ96QR8 312 aaKnown RBP15.47■□□□□ 0.07
HOXC4-202ENST00000430889 GLIS2Q9BZE0 524 aaPredicted RBP15.47■□□□□ 0.07
HOXC4-202ENST00000430889 EDEM3Q9BZQ6 932 aa15.47■□□□□ 0.07
HOXC4-202ENST00000430889 VEZTQ9HBM0 779 aa15.47■□□□□ 0.07
HOXC4-202ENST00000430889 CLCN6P51797 869 aa15.46■□□□□ 0.07
HOXC4-202ENST00000430889 KCNMA1Q12791 1236 aa15.46■□□□□ 0.07
HOXC4-202ENST00000430889 PPP2R5CQ13362 524 aa15.46■□□□□ 0.07
HOXC4-202ENST00000430889 BMT2Q1RMZ1 405 aa15.46■□□□□ 0.07
HOXC4-202ENST00000430889 EDRF1Q3B7T1 1238 aa15.46■□□□□ 0.07
HOXC4-202ENST00000430889 HERC4Q5GLZ8 1057 aaPredicted RBP15.46■□□□□ 0.07
HOXC4-202ENST00000430889 B3GNT9Q6UX72 402 aa15.46■□□□□ 0.07
HOXC4-202ENST00000430889 PPP4R3CPQ6ZMV5 832 aa15.46■□□□□ 0.07
HOXC4-202ENST00000430889 DEFB132Q7Z7B7 95 aa15.46■□□□□ 0.07
HOXC4-202ENST00000430889 CCDC84Q86UT8 332 aaPredicted RBP15.46■□□□□ 0.07
HOXC4-202ENST00000430889 TRIM59Q8IWR1 403 aa15.46■□□□□ 0.07
HOXC4-202ENST00000430889 HSD17B14Q9BPX1 270 aa15.46■□□□□ 0.07
HOXC4-202ENST00000430889 EIF2AK1Q9BQI3 630 aaKnown RBP15.46■□□□□ 0.07
HOXC4-202ENST00000430889 SH2D4AQ9H788 454 aa15.46■□□□□ 0.07
HOXC4-202ENST00000430889 NHEJ1Q9H9Q4 299 aaPredicted RBP15.46■□□□□ 0.07
HOXC4-202ENST00000430889 EMILIN3Q9NT22 766 aa15.46■□□□□ 0.07
HOXC4-202ENST00000430889 TRIM10Q9UDY6 481 aa15.46■□□□□ 0.07
HOXC4-202ENST00000430889 FEM1BQ9UK73 627 aa15.46■□□□□ 0.07
HOXC4-202ENST00000430889 DNM3Q9UQ16 869 aa15.46■□□□□ 0.07
HOXC4-202ENST00000430889 CTAGE9A4FU28 777 aa15.45■□□□□ 0.06
HOXC4-202ENST00000430889 GCOM1H8Y6P7 765 aaPredicted RBP15.45■□□□□ 0.06
HOXC4-202ENST00000430889 LCA5LO95447 670 aa15.45■□□□□ 0.06
HOXC4-202ENST00000430889 EYA4O95677 639 aa15.45■□□□□ 0.06
HOXC4-202ENST00000430889 POLR2MP0CAP2 368 aa15.45■□□□□ 0.06
HOXC4-202ENST00000430889 HOXD13P35453 343 aa15.45■□□□□ 0.06
HOXC4-202ENST00000430889 CYLC1P35663 651 aaPredicted RBP15.45■□□□□ 0.06
HOXC4-202ENST00000430889 BAG6P46379 1132 aa15.45■□□□□ 0.06
HOXC4-202ENST00000430889 CASP5P51878 434 aa15.45■□□□□ 0.06
HOXC4-202ENST00000430889 ZNF280AP59817 542 aaPredicted RBP15.45■□□□□ 0.06
HOXC4-202ENST00000430889 GHRHRQ02643 423 aa15.45■□□□□ 0.06
HOXC4-202ENST00000430889 TSR1Q2NL82 804 aaKnown RBP15.45■□□□□ 0.06
HOXC4-202ENST00000430889 NBPF9Q3BBW0 867 aa15.45■□□□□ 0.06
HOXC4-202ENST00000430889 OTOP1Q7RTM1 612 aa15.45■□□□□ 0.06
HOXC4-202ENST00000430889 TEPSINQ96N21 525 aa15.45■□□□□ 0.06
HOXC4-202ENST00000430889 NAPGQ99747 312 aaPredicted RBP15.45■□□□□ 0.06
HOXC4-202ENST00000430889 REEP2Q9BRK0 252 aa15.45■□□□□ 0.06
HOXC4-202ENST00000430889 OGFRQ9NZT2 677 aa15.45■□□□□ 0.06
HOXC4-202ENST00000430889 TBC1D7Q9P0N9 293 aa15.45■□□□□ 0.06
HOXC4-202ENST00000430889 MRPL11Q9Y3B7 192 aaKnown RBP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms