RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 PSMD2Q13200 908 aa16.57■□□□□ 0.24
LINC00839-202ENST00000429940 GRIK5Q16478 980 aa16.57■□□□□ 0.24
LINC00839-202ENST00000429940 SFMBT2Q5VUG0 894 aa16.57■□□□□ 0.24
LINC00839-202ENST00000429940 FLAD1Q8NFF5 587 aa16.57■□□□□ 0.24
LINC00839-202ENST00000429940 SNX29Q8TEQ0 813 aa16.57■□□□□ 0.24
LINC00839-202ENST00000429940 CEP72Q9P209 647 aa16.57■□□□□ 0.24
LINC00839-202ENST00000429940 ESYT2A0FGR8 921 aa16.56■□□□□ 0.24
LINC00839-202ENST00000429940 PALMO75781 387 aa16.56■□□□□ 0.24
LINC00839-202ENST00000429940 HEXIM1O94992 359 aaKnown RBP16.56■□□□□ 0.24
LINC00839-202ENST00000429940 TDP2O95551 362 aa16.56■□□□□ 0.24
LINC00839-202ENST00000429940 SERPING1P05155 500 aa16.56■□□□□ 0.24
LINC00839-202ENST00000429940 CDK8P49336 464 aa16.56■□□□□ 0.24
LINC00839-202ENST00000429940 PPP4CP60510 307 aa16.56■□□□□ 0.24
LINC00839-202ENST00000429940 CCDC43Q96MW1 224 aaKnown RBP16.56■□□□□ 0.24
LINC00839-202ENST00000429940 LRRC27Q9C0I9 530 aa16.56■□□□□ 0.24
LINC00839-202ENST00000429940 NUCKS1Q9H1E3 243 aaKnown RBP16.56■□□□□ 0.24
LINC00839-202ENST00000429940 EPB41L5Q9HCM4 733 aa16.56■□□□□ 0.24
LINC00839-202ENST00000429940 LUC7LQ9NQ29 371 aaKnown RBP16.56■□□□□ 0.24
LINC00839-202ENST00000429940 GDF3Q9NR23 364 aa16.56■□□□□ 0.24
LINC00839-202ENST00000429940 NFU1Q9UMS0 254 aa16.56■□□□□ 0.24
LINC00839-202ENST00000429940 COL4A3BPQ9Y5P4 624 aa16.56■□□□□ 0.24
LINC00839-202ENST00000429940 A6NNZ2 444 aa16.56■□□□□ 0.24
LINC00839-202ENST00000429940 KRT14P02533 472 aa16.56■□□□□ 0.24
LINC00839-202ENST00000429940 SMARCA1P28370 1054 aa16.56■□□□□ 0.24
LINC00839-202ENST00000429940 CARSP49589 748 aaKnown RBP16.56■□□□□ 0.24
LINC00839-202ENST00000429940 DNA2P51530 1060 aa16.56■□□□□ 0.24
LINC00839-202ENST00000429940 GUCY2DQ02846 1103 aa16.56■□□□□ 0.24
LINC00839-202ENST00000429940 EHHADHQ08426 723 aa16.56■□□□□ 0.24
LINC00839-202ENST00000429940 PAK2Q13177 524 aa16.56■□□□□ 0.24
LINC00839-202ENST00000429940 TUBB8Q3ZCM7 444 aa16.56■□□□□ 0.24
LINC00839-202ENST00000429940 CCDC40Q4G0X9 1142 aa16.56■□□□□ 0.24
LINC00839-202ENST00000429940 KRT79Q5XKE5 535 aa16.56■□□□□ 0.24
LINC00839-202ENST00000429940 KCTD16Q68DU8 428 aa16.56■□□□□ 0.24
LINC00839-202ENST00000429940 ARHGAP27Q6ZUM4 889 aa16.56■□□□□ 0.24
LINC00839-202ENST00000429940 MYOCDQ8IZQ8 938 aa16.56■□□□□ 0.24
LINC00839-202ENST00000429940 NEDD1Q8NHV4 660 aa16.56■□□□□ 0.24
LINC00839-202ENST00000429940 IFT81Q8WYA0 676 aa16.56■□□□□ 0.24
LINC00839-202ENST00000429940 NUDT12Q9BQG2 462 aa16.56■□□□□ 0.24
LINC00839-202ENST00000429940 UBA5Q9GZZ9 404 aa16.56■□□□□ 0.24
LINC00839-202ENST00000429940 ERLIN2O94905 339 aa16.55■□□□□ 0.24
LINC00839-202ENST00000429940 FAM153BP0C7A2 387 aa16.55■□□□□ 0.24
LINC00839-202ENST00000429940 HOXA7P31268 230 aaPredicted RBP16.55■□□□□ 0.24
LINC00839-202ENST00000429940 LIG3P49916 1009 aa16.55■□□□□ 0.24
LINC00839-202ENST00000429940 PDCLQ13371 301 aa16.55■□□□□ 0.24
LINC00839-202ENST00000429940 PDIA5Q14554 519 aa16.55■□□□□ 0.24
LINC00839-202ENST00000429940 FAM153CQ494X1 144 aa16.55■□□□□ 0.24
LINC00839-202ENST00000429940 FAM83BQ5T0W9 1011 aa16.55■□□□□ 0.24
LINC00839-202ENST00000429940 CFAP58Q5T655 872 aa16.55■□□□□ 0.24
LINC00839-202ENST00000429940 KCNK18Q7Z418 384 aa16.55■□□□□ 0.24
LINC00839-202ENST00000429940 SH2D3CQ8N5H7 860 aa16.55■□□□□ 0.24
LINC00839-202ENST00000429940 SYN2Q92777 582 aaPredicted RBP16.55■□□□□ 0.24
LINC00839-202ENST00000429940 FAM153AQ9UHL3 310 aa16.55■□□□□ 0.24
LINC00839-202ENST00000429940 DDX60LQ5H9U9 1706 aaKnown RBP16.55■□□□□ 0.24
LINC00839-202ENST00000429940 ESYT3A0FGR9 886 aa16.54■□□□□ 0.24
LINC00839-202ENST00000429940 ZSCAN5CA6NGD5 496 aaPredicted RBP16.54■□□□□ 0.24
LINC00839-202ENST00000429940 TRAF5O00463 557 aa16.54■□□□□ 0.24
LINC00839-202ENST00000429940 TLR2O60603 784 aa16.54■□□□□ 0.24
LINC00839-202ENST00000429940 NOL4O94818 638 aa16.54■□□□□ 0.24
LINC00839-202ENST00000429940 FTCDO95954 541 aa16.54■□□□□ 0.24
LINC00839-202ENST00000429940 FKBP3Q00688 224 aaKnown RBP16.54■□□□□ 0.24
LINC00839-202ENST00000429940 NAB2Q15742 525 aa16.54■□□□□ 0.24
LINC00839-202ENST00000429940 FOXR2Q6PJQ5 311 aa16.54■□□□□ 0.24
LINC00839-202ENST00000429940 C16orf86Q6ZW13 317 aa16.54■□□□□ 0.24
LINC00839-202ENST00000429940 CEP95Q96GE4 821 aa16.54■□□□□ 0.24
LINC00839-202ENST00000429940 LSM14BQ9BX40 385 aaKnown RBP16.54■□□□□ 0.24
LINC00839-202ENST00000429940 ANKIB1Q9P2G1 1089 aa16.54■□□□□ 0.24
LINC00839-202ENST00000429940 SAMM50Q9Y512 469 aa16.54■□□□□ 0.24
LINC00839-202ENST00000429940 USP17L5A8MUK1 530 aa16.54■□□□□ 0.24
LINC00839-202ENST00000429940 LDHCP07864 332 aa16.54■□□□□ 0.24
LINC00839-202ENST00000429940 HMGB2P26583 209 aaKnown RBP16.54■□□□□ 0.24
LINC00839-202ENST00000429940 ATP1A2P50993 1020 aa16.54■□□□□ 0.24
LINC00839-202ENST00000429940 ADCY7P51828 1080 aa16.54■□□□□ 0.24
LINC00839-202ENST00000429940 GTF2A1P52655 376 aaPredicted RBP16.54■□□□□ 0.24
LINC00839-202ENST00000429940 POLR2FP61218 127 aaKnown RBP16.54■□□□□ 0.24
LINC00839-202ENST00000429940 APBA1Q02410 837 aa16.54■□□□□ 0.24
LINC00839-202ENST00000429940 TMEM119Q4V9L6 283 aa16.54■□□□□ 0.24
LINC00839-202ENST00000429940 ATP6V0A2Q9Y487 856 aa16.54■□□□□ 0.24
LINC00839-202ENST00000429940 GRID2IPA4D2P6 1211 aa16.53■□□□□ 0.24
LINC00839-202ENST00000429940 NDUFAB1O14561 156 aa16.53■□□□□ 0.24
LINC00839-202ENST00000429940 COASYQ13057 564 aa16.53■□□□□ 0.24
LINC00839-202ENST00000429940 ZCWPW2Q504Y3 356 aa16.53■□□□□ 0.24
LINC00839-202ENST00000429940 IQCKQ8N0W5 287 aa16.53■□□□□ 0.24
LINC00839-202ENST00000429940 COA7Q96BR5 231 aa16.53■□□□□ 0.24
LINC00839-202ENST00000429940 KRT12Q99456 494 aa16.53■□□□□ 0.24
LINC00839-202ENST00000429940 RTFDC1Q9BY42 306 aaPredicted RBP16.53■□□□□ 0.24
LINC00839-202ENST00000429940 FRMPD2Q68DX3 1309 aaPredicted RBP16.53■□□□□ 0.24
LINC00839-202ENST00000429940 ZNF233A6NK53 670 aa16.53■□□□□ 0.24
LINC00839-202ENST00000429940 hCG_1984214I3L0E3 225 aa16.53■□□□□ 0.24
LINC00839-202ENST00000429940 KLRC1P26715 233 aa16.53■□□□□ 0.24
LINC00839-202ENST00000429940 GUCY2FP51841 1108 aa16.53■□□□□ 0.24
LINC00839-202ENST00000429940 MEI1Q5TIA1 1274 aa16.53■□□□□ 0.24
LINC00839-202ENST00000429940 ZNF713Q8N859 430 aaPredicted RBP16.53■□□□□ 0.24
LINC00839-202ENST00000429940 TBC1D5Q92609 795 aa16.53■□□□□ 0.24
LINC00839-202ENST00000429940 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.53■□□□□ 0.24
LINC00839-202ENST00000429940 RIOX1Q9H6W3 641 aa16.53■□□□□ 0.24
LINC00839-202ENST00000429940 EDIL3O43854 480 aa16.52■□□□□ 0.24
LINC00839-202ENST00000429940 BTDP43251 543 aa16.52■□□□□ 0.24
LINC00839-202ENST00000429940 RAPGEF1Q13905 1077 aa16.52■□□□□ 0.24
LINC00839-202ENST00000429940 SLC18A3Q16572 532 aa16.52■□□□□ 0.24
LINC00839-202ENST00000429940 KDM7AQ6ZMT4 941 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms