RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 GAP43P17677 238 aa9.69□□□□□ -0.86
CTNND1-208ENST00000428599 CLCN1P35523 988 aa9.69□□□□□ -0.86
CTNND1-208ENST00000428599 ADD1P35611 737 aaKnown RBP9.69□□□□□ -0.86
CTNND1-208ENST00000428599 PTPN12Q05209 780 aaKnown RBP9.69□□□□□ -0.86
CTNND1-208ENST00000428599 PNOCQ13519 176 aa9.69□□□□□ -0.86
CTNND1-208ENST00000428599 RSBN1LQ6PCB5 846 aaPredicted RBP9.69□□□□□ -0.86
CTNND1-208ENST00000428599 TRMT44Q8IYL2 757 aaKnown RBP9.69□□□□□ -0.86
CTNND1-208ENST00000428599 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.69□□□□□ -0.86
CTNND1-208ENST00000428599 TTLL6Q8N841 843 aa9.69□□□□□ -0.86
CTNND1-208ENST00000428599 MASTLQ96GX5 879 aa9.69□□□□□ -0.86
CTNND1-208ENST00000428599 ABCA6Q8N139 1617 aa9.69□□□□□ -0.86
CTNND1-208ENST00000428599 DIP2CQ9Y2E4 1556 aa9.69□□□□□ -0.86
CTNND1-208ENST00000428599 MYO1FO00160 1098 aa9.69□□□□□ -0.86
CTNND1-208ENST00000428599 MYCP01106 439 aaPredicted RBP9.69□□□□□ -0.86
CTNND1-208ENST00000428599 H2AFZP0C0S5 128 aa9.69□□□□□ -0.86
CTNND1-208ENST00000428599 PCP11498 1178 aaKnown RBP9.69□□□□□ -0.86
CTNND1-208ENST00000428599 ZNF18P17022 549 aa9.69□□□□□ -0.86
CTNND1-208ENST00000428599 WHAMMP3Q1A5X7 153 aa9.69□□□□□ -0.86
CTNND1-208ENST00000428599 HP1BP3Q5SSJ5 553 aaPredicted RBP9.69□□□□□ -0.86
CTNND1-208ENST00000428599 ARHGEF18Q6ZSZ5 1173 aa9.69□□□□□ -0.86
CTNND1-208ENST00000428599 H2AFVQ71UI9 128 aa9.69□□□□□ -0.86
CTNND1-208ENST00000428599 GPKOWQ92917 476 aaPredicted RBP eCLIP9.69□□□□□ -0.86
CTNND1-208ENST00000428599 GPR101Q96P66 508 aaPredicted RBP9.69□□□□□ -0.86
CTNND1-208ENST00000428599 STAP2Q9UGK3 403 aa9.69□□□□□ -0.86
CTNND1-208ENST00000428599 PALD1Q9ULE6 856 aa9.69□□□□□ -0.86
CTNND1-208ENST00000428599 ARL13BQ3SXY8 428 aa9.69□□□□□ -0.86
CTNND1-208ENST00000428599 GPATCH4Q5T3I0 446 aaKnown RBP9.69□□□□□ -0.86
CTNND1-208ENST00000428599 ACBD5Q5T8D3 534 aaPredicted RBP9.69□□□□□ -0.86
CTNND1-208ENST00000428599 SRRM1Q8IYB3 904 aaKnown RBP9.69□□□□□ -0.86
CTNND1-208ENST00000428599 TTLL11Q8NHH1 800 aa9.69□□□□□ -0.86
CTNND1-208ENST00000428599 CERKQ8TCT0 537 aa9.69□□□□□ -0.86
CTNND1-208ENST00000428599 MAGEF1Q9HAY2 307 aa9.69□□□□□ -0.86
CTNND1-208ENST00000428599 TLK1Q9UKI8 766 aa9.69□□□□□ -0.86
CTNND1-208ENST00000428599 COL15A1P39059 1388 aa9.69□□□□□ -0.86
CTNND1-208ENST00000428599 ASPRV1Q53RT3 343 aa9.69□□□□□ -0.86
CTNND1-208ENST00000428599 FAM26FQ5R3K3 315 aa9.69□□□□□ -0.86
CTNND1-208ENST00000428599 CC2D2BQ6DHV5 1058 aa9.69□□□□□ -0.86
CTNND1-208ENST00000428599 NOSTRINQ8IVI9 506 aa9.69□□□□□ -0.86
CTNND1-208ENST00000428599 MRPL46Q9H2W6 279 aaKnown RBP9.69□□□□□ -0.86
CTNND1-208ENST00000428599 CBX8Q9HC52 389 aa9.69□□□□□ -0.86
CTNND1-208ENST00000428599 POLIQ9UNA4 740 aa9.69□□□□□ -0.86
CTNND1-208ENST00000428599 CRB1P82279 1406 aa9.68□□□□□ -0.86
CTNND1-208ENST00000428599 BNIP3LO60238 219 aa9.68□□□□□ -0.86
CTNND1-208ENST00000428599 PPARDQ03181 441 aa9.68□□□□□ -0.86
CTNND1-208ENST00000428599 GOLGA8FQ08AF8 430 aa9.68□□□□□ -0.86
CTNND1-208ENST00000428599 GOLGA8DPQ0D2H9 430 aa9.68□□□□□ -0.86
CTNND1-208ENST00000428599 MYSM1Q5VVJ2 828 aa9.68□□□□□ -0.86
CTNND1-208ENST00000428599 DSTYKQ6XUX3 929 aa9.68□□□□□ -0.86
CTNND1-208ENST00000428599 SLC10A4Q96EP9 437 aa9.68□□□□□ -0.86
CTNND1-208ENST00000428599 BSDC1Q9NW68 430 aaPredicted RBP9.68□□□□□ -0.86
CTNND1-208ENST00000428599 NARFQ9UHQ1 456 aa9.68□□□□□ -0.86
CTNND1-208ENST00000428599 JCADQ9P266 1359 aa9.68□□□□□ -0.86
CTNND1-208ENST00000428599 GOLGA8KD6RF30 607 aa9.68□□□□□ -0.86
CTNND1-208ENST00000428599 MCF2LO15068 1137 aa9.68□□□□□ -0.86
CTNND1-208ENST00000428599 ADD2P35612 726 aa9.68□□□□□ -0.86
CTNND1-208ENST00000428599 ADALQ6DHV7 355 aa9.68□□□□□ -0.86
CTNND1-208ENST00000428599 SPICE1Q8N0Z3 855 aa9.68□□□□□ -0.86
CTNND1-208ENST00000428599 TEKT2Q9UIF3 430 aa9.68□□□□□ -0.86
CTNND1-208ENST00000428599 ZNF521Q96K83 1311 aa9.68□□□□□ -0.86
CTNND1-208ENST00000428599 MADDQ8WXG6 1647 aa9.68□□□□□ -0.86
CTNND1-208ENST00000428599 C21orf2O43822 256 aa9.68□□□□□ -0.86
CTNND1-208ENST00000428599 CHEK2O96017 543 aa9.68□□□□□ -0.86
CTNND1-208ENST00000428599 MX2P20592 715 aa9.68□□□□□ -0.86
CTNND1-208ENST00000428599 SURF1Q15526 300 aa9.68□□□□□ -0.86
CTNND1-208ENST00000428599 EXOC3L4Q17RC7 722 aa9.68□□□□□ -0.86
CTNND1-208ENST00000428599 CXorf38Q8TB03 319 aa9.68□□□□□ -0.86
CTNND1-208ENST00000428599 WDR11Q9BZH6 1224 aa9.68□□□□□ -0.86
CTNND1-208ENST00000428599 DRC3Q9H069 523 aa9.68□□□□□ -0.86
CTNND1-208ENST00000428599 ZSWIM6Q9HCJ5 1215 aa9.68□□□□□ -0.86
CTNND1-208ENST00000428599 BUB1O43683 1085 aa9.68□□□□□ -0.86
CTNND1-208ENST00000428599 GTPBP6O43824 516 aaPredicted RBP9.68□□□□□ -0.86
CTNND1-208ENST00000428599 SF3A3Q12874 501 aaKnown RBP eCLIP9.68□□□□□ -0.862e-7■■■□□ 14.9
CTNND1-208ENST00000428599 TAF11Q15544 211 aa9.68□□□□□ -0.86
CTNND1-208ENST00000428599 RTKN2Q8IZC4 609 aa9.68□□□□□ -0.86
CTNND1-208ENST00000428599 THEM5Q8N1Q8 247 aa9.68□□□□□ -0.86
CTNND1-208ENST00000428599 FBXL13Q8NEE6 735 aa9.68□□□□□ -0.86
CTNND1-208ENST00000428599 DPH5Q9H2P9 285 aa9.68□□□□□ -0.86
CTNND1-208ENST00000428599 C1orf167Q5SNV9 1468 aa9.68□□□□□ -0.86
CTNND1-208ENST00000428599 MYL3P08590 195 aa9.68□□□□□ -0.86
CTNND1-208ENST00000428599 PMLP29590 882 aa9.68□□□□□ -0.86
CTNND1-208ENST00000428599 LONP1P36776 959 aaKnown RBP9.68□□□□□ -0.86
CTNND1-208ENST00000428599 C7orf31Q8N865 590 aa9.68□□□□□ -0.86
CTNND1-208ENST00000428599 CDC26Q8NHZ8 85 aa9.68□□□□□ -0.86
CTNND1-208ENST00000428599 PLEKHA4Q9H4M7 779 aa9.68□□□□□ -0.86
CTNND1-208ENST00000428599 USP17L3A6NCW0 530 aa9.67□□□□□ -0.86
CTNND1-208ENST00000428599 USP17L4A6NCW7 530 aa9.67□□□□□ -0.86
CTNND1-208ENST00000428599 PFKFB2O60825 505 aa9.67□□□□□ -0.86
CTNND1-208ENST00000428599 GDF11O95390 407 aa9.67□□□□□ -0.86
CTNND1-208ENST00000428599 GNAT1P11488 350 aa9.67□□□□□ -0.86
CTNND1-208ENST00000428599 CYP4A11Q02928 519 aa9.67□□□□□ -0.86
CTNND1-208ENST00000428599 USP17L1Q7RTZ2 530 aa9.67□□□□□ -0.86
CTNND1-208ENST00000428599 PDCD7Q8N8D1 485 aaKnown RBP9.67□□□□□ -0.86
CTNND1-208ENST00000428599 C2orf69Q8N8R5 385 aa9.67□□□□□ -0.86
CTNND1-208ENST00000428599 PPRC1Q5VV67 1664 aaKnown RBP9.67□□□□□ -0.86
CTNND1-208ENST00000428599 H7C1W4 665 aa9.67□□□□□ -0.86
CTNND1-208ENST00000428599 HIP1RO75146 1068 aa9.67□□□□□ -0.86
CTNND1-208ENST00000428599 PSMC2P35998 433 aaKnown RBP9.67□□□□□ -0.86
CTNND1-208ENST00000428599 PTK2BQ14289 1009 aa9.67□□□□□ -0.86
CTNND1-208ENST00000428599 SKIV2LQ15477 1246 aaKnown RBP9.67□□□□□ -0.86
CTNND1-208ENST00000428599 LCORLQ8N3X6 602 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms