RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 MAPK4P31152 587 aa14.29□□□□□ -0.12
SPG11-202ENST00000427534 CDK8P49336 464 aa14.29□□□□□ -0.12
SPG11-202ENST00000427534 TWF2Q6IBS0 349 aaKnown RBP14.29□□□□□ -0.12
SPG11-202ENST00000427534 CATSPER4Q7RTX7 472 aa14.29□□□□□ -0.12
SPG11-202ENST00000427534 MRPL46Q9H2W6 279 aaKnown RBP14.29□□□□□ -0.12
SPG11-202ENST00000427534 LARSQ9P2J5 1176 aaKnown RBP14.29□□□□□ -0.12
SPG11-202ENST00000427534 ZNF521Q96K83 1311 aa14.29□□□□□ -0.12
SPG11-202ENST00000427534 IFNAR2P48551 515 aa14.29□□□□□ -0.12
SPG11-202ENST00000427534 PTK2Q05397 1052 aa14.29□□□□□ -0.12
SPG11-202ENST00000427534 TMEM62Q0P6H9 643 aa14.29□□□□□ -0.12
SPG11-202ENST00000427534 ANKRD20A3Q5VUR7 823 aa14.29□□□□□ -0.12
SPG11-202ENST00000427534 LEMD3Q9Y2U8 911 aa14.29□□□□□ -0.12
SPG11-202ENST00000427534 UGGT1Q9NYU2 1555 aa14.29□□□□□ -0.12
SPG11-202ENST00000427534 UBE3CQ15386 1083 aa14.29□□□□□ -0.12
SPG11-202ENST00000427534 NLRP10Q86W26 655 aa14.29□□□□□ -0.12
SPG11-202ENST00000427534 GBP7Q8N8V2 638 aaPredicted RBP14.29□□□□□ -0.12
SPG11-202ENST00000427534 THOC1Q96FV9 657 aaKnown RBP14.29□□□□□ -0.12
SPG11-202ENST00000427534 DDX27Q96GQ7 796 aaKnown RBP14.29□□□□□ -0.12
SPG11-202ENST00000427534 CIAO1O76071 339 aa14.29□□□□□ -0.12
SPG11-202ENST00000427534 GNA14O95837 355 aa14.29□□□□□ -0.12
SPG11-202ENST00000427534 TRAPPC10P48553 1259 aa14.29□□□□□ -0.12
SPG11-202ENST00000427534 PDE1BQ01064 536 aa14.29□□□□□ -0.12
SPG11-202ENST00000427534 RHPN2Q8IUC4 686 aa14.29□□□□□ -0.12
SPG11-202ENST00000427534 PDZD8Q8NEN9 1154 aa14.29□□□□□ -0.12
SPG11-202ENST00000427534 SARS2Q9NP81 518 aaKnown RBP14.29□□□□□ -0.12
SPG11-202ENST00000427534 GPR108Q9NPR9 543 aa14.29□□□□□ -0.12
SPG11-202ENST00000427534 AFF4Q9UHB7 1163 aaKnown RBP14.29□□□□□ -0.12
SPG11-202ENST00000427534 PALLDQ8WX93 1383 aa14.29□□□□□ -0.12
SPG11-202ENST00000427534 RFC1P35251 1148 aaPredicted RBP14.29□□□□□ -0.12
SPG11-202ENST00000427534 OSBPL3Q9H4L5 887 aa14.29□□□□□ -0.12
SPG11-202ENST00000427534 SLCO1A2P46721 670 aa14.28□□□□□ -0.12
SPG11-202ENST00000427534 RASEFQ8IZ41 740 aa14.28□□□□□ -0.12
SPG11-202ENST00000427534 LARP4BQ92615 738 aaKnown RBP14.28□□□□□ -0.12
SPG11-202ENST00000427534 ATP6V0A1Q93050 837 aa14.28□□□□□ -0.12
SPG11-202ENST00000427534 NT5C1BQ96P26 610 aa14.28□□□□□ -0.12
SPG11-202ENST00000427534 MSTO1Q9BUK6 570 aa14.28□□□□□ -0.12
SPG11-202ENST00000427534 RPF1Q9H9Y2 349 aaKnown RBP14.28□□□□□ -0.12
SPG11-202ENST00000427534 KDM5CP41229 1560 aa14.28□□□□□ -0.12
SPG11-202ENST00000427534 FTCDO95954 541 aa14.28□□□□□ -0.12
SPG11-202ENST00000427534 SAMD9LQ8IVG5 1584 aa14.28□□□□□ -0.12
SPG11-202ENST00000427534 NEMP1O14524 444 aa14.28□□□□□ -0.12
SPG11-202ENST00000427534 GTPBP6O43824 516 aaPredicted RBP14.28□□□□□ -0.12
SPG11-202ENST00000427534 DDAH1O94760 285 aa14.28□□□□□ -0.12
SPG11-202ENST00000427534 HEXIM1O94992 359 aaKnown RBP14.28□□□□□ -0.12
SPG11-202ENST00000427534 MFAP3P55082 362 aa14.28□□□□□ -0.12
SPG11-202ENST00000427534 SNRNP48Q6IEG0 339 aaKnown RBP14.28□□□□□ -0.12
SPG11-202ENST00000427534 NLRP1Q9C000 1473 aa14.28□□□□□ -0.12
SPG11-202ENST00000427534 CLASP1Q7Z460 1538 aa14.28□□□□□ -0.12
SPG11-202ENST00000427534 KDM6BO15054 1643 aa14.28□□□□□ -0.12
SPG11-202ENST00000427534 CASP1P29466 404 aa14.28□□□□□ -0.12
SPG11-202ENST00000427534 KIF11P52732 1056 aa14.28□□□□□ -0.12
SPG11-202ENST00000427534 C2orf54Q08AI8 447 aa14.28□□□□□ -0.12
SPG11-202ENST00000427534 CCDC84Q86UT8 332 aaPredicted RBP14.28□□□□□ -0.12
SPG11-202ENST00000427534 SH2D3AQ9BRG2 576 aa14.28□□□□□ -0.12
SPG11-202ENST00000427534 CASQ2O14958 399 aaPredicted RBP14.28□□□□□ -0.12
SPG11-202ENST00000427534 TMEM260Q9NX78 707 aa14.28□□□□□ -0.12
SPG11-202ENST00000427534 ROBO2Q9HCK4 1378 aa14.28□□□□□ -0.12
SPG11-202ENST00000427534 ABCA8O94911 1581 aa14.28□□□□□ -0.12
SPG11-202ENST00000427534 NPR1P16066 1061 aa14.27□□□□□ -0.12
SPG11-202ENST00000427534 CMA1P23946 247 aa14.27□□□□□ -0.12
SPG11-202ENST00000427534 RBM46Q8TBY0 533 aaKnown RBP14.27□□□□□ -0.12
SPG11-202ENST00000427534 IWS1Q96ST2 819 aa14.27□□□□□ -0.12
SPG11-202ENST00000427534 TRPC7Q9HCX4 862 aa14.27□□□□□ -0.12
SPG11-202ENST00000427534 PI4KBQ9UBF8 816 aa14.27□□□□□ -0.12
SPG11-202ENST00000427534 USP6P35125 1406 aa14.27□□□□□ -0.12
SPG11-202ENST00000427534 MOCS3O95396 460 aa14.27□□□□□ -0.12
SPG11-202ENST00000427534 MOCS2O96007 188 aaPredicted RBP14.27□□□□□ -0.12
SPG11-202ENST00000427534 CTSHP09668 335 aa14.27□□□□□ -0.12
SPG11-202ENST00000427534 ZNF853P0CG23 659 aa14.27□□□□□ -0.12
SPG11-202ENST00000427534 MX2P20592 715 aa14.27□□□□□ -0.12
SPG11-202ENST00000427534 SYCP2LQ5T4T6 812 aa14.27□□□□□ -0.12
SPG11-202ENST00000427534 SWAP70Q9UH65 585 aa14.27□□□□□ -0.12
SPG11-202ENST00000427534 DPYSL4O14531 572 aa14.27□□□□□ -0.12
SPG11-202ENST00000427534 SEMA3EO15041 775 aa14.27□□□□□ -0.12
SPG11-202ENST00000427534 OAS2P29728 719 aaKnown RBP14.27□□□□□ -0.12
SPG11-202ENST00000427534 GBP1P32455 592 aa14.27□□□□□ -0.12
SPG11-202ENST00000427534 FAM186BQ8IYM0 893 aa14.27□□□□□ -0.12
SPG11-202ENST00000427534 WDR48Q8TAF3 677 aa14.27□□□□□ -0.12
SPG11-202ENST00000427534 MIPOL1Q8TD10 442 aa14.27□□□□□ -0.12
SPG11-202ENST00000427534 ACCSQ96QU6 501 aa14.27□□□□□ -0.12
SPG11-202ENST00000427534 MMTAG2Q9BU76 263 aaKnown RBP14.27□□□□□ -0.12
SPG11-202ENST00000427534 GCNT4Q9P109 453 aa14.27□□□□□ -0.12
SPG11-202ENST00000427534 SAR1BQ9Y6B6 198 aa14.27□□□□□ -0.12
SPG11-202ENST00000427534 PAK2Q13177 524 aa14.27□□□□□ -0.13
SPG11-202ENST00000427534 MASTLQ96GX5 879 aa14.27□□□□□ -0.13
SPG11-202ENST00000427534 RPGRIP1Q96KN7 1286 aa14.27□□□□□ -0.13
SPG11-202ENST00000427534 CFAP74Q9C0B2 1584 aa14.27□□□□□ -0.13
SPG11-202ENST00000427534 MYL1P05976 194 aa14.27□□□□□ -0.13
SPG11-202ENST00000427534 EEF1GP26641 437 aaKnown RBP14.27□□□□□ -0.13
SPG11-202ENST00000427534 CASP14P31944 242 aa14.27□□□□□ -0.13
SPG11-202ENST00000427534 COPB2P35606 906 aa14.27□□□□□ -0.13
SPG11-202ENST00000427534 ZMYM1Q5SVZ6 1142 aa14.27□□□□□ -0.13
SPG11-202ENST00000427534 N4BP2L2Q92802 583 aaPredicted RBP14.27□□□□□ -0.13
SPG11-202ENST00000427534 PI4K2BG5E9Z4 385 aa14.27□□□□□ -0.13
SPG11-202ENST00000427534 PSAPP07602 524 aa14.27□□□□□ -0.13
SPG11-202ENST00000427534 SUGT1Q9Y2Z0 365 aa14.27□□□□□ -0.13
SPG11-202ENST00000427534 TTC37Q6PGP7 1564 aa14.26□□□□□ -0.13
SPG11-202ENST00000427534 PSMC5P62195 406 aa14.26□□□□□ -0.13
SPG11-202ENST00000427534 TMED2Q15363 201 aa14.26□□□□□ -0.13
SPG11-202ENST00000427534 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms