RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 IPO5O00410 1097 aaKnown RBP6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 CTNND1O60716 968 aaKnown RBP6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 HEXIM1O94992 359 aaKnown RBP6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 TSPOAP1O95153 1857 aa6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 AGTP01019 485 aa6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 KRT14P02533 472 aa6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 GYPCP04921 128 aa6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 ATP1A1P05023 1023 aaKnown RBP6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 ZNF24P17028 368 aa6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 SP100P23497 879 aaPredicted RBP6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 VHLP40337 213 aa6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 RGS2P41220 211 aa6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 NEDD4P46934 1319 aa6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 RPL26P61254 145 aaKnown RBP6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 IRX4P78413 519 aa6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 PHEXP78562 749 aa6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 ZBED6P86452 979 aa6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 OCRLQ01968 901 aa6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 PNOCQ13519 176 aa6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 CYLC2Q14093 348 aaPredicted RBP6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 MEA1Q16626 185 aa6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 ACCSLQ4AC99 568 aa6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 MCMDC2Q4G0Z9 681 aa6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 SLC44A4Q53GD3 710 aa6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 PLA2G2CQ5R387 149 aa6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 ERMARDQ5T6L9 678 aa6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 DAB2IPQ5VWQ8 1189 aa6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 KCTD16Q68DU8 428 aa6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 TRIM68Q6AZZ1 485 aa6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 INTS8Q75QN2 995 aaKnown RBP6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 TBC1D1Q86TI0 1168 aaPredicted RBP6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 KIAA0825Q8IV33 1275 aa6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 SULF1Q8IWU6 871 aa6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 EXOC8Q8IYI6 725 aa6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 SYCP3Q8IZU3 236 aa6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 MINK1Q8N4C8 1332 aaPredicted RBP6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 ENDOVQ8N8Q3 282 aaKnown RBP6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 ATP8B4Q8TF62 1192 aa6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 ATXN2LQ8WWM7 1075 aaKnown RBP6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 NCSTNQ92542 709 aa6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 ARL8AQ96BM9 186 aa6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 PGM2Q96G03 612 aa6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 COG3Q96JB2 828 aa6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 CCDC42Q96M95 316 aa6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 FTOQ9C0B1 505 aaKnown RBP eCLIP6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 ISCUQ9H1K1 167 aa6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 THAP9Q9H5L6 903 aa6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 ECT2Q9H8V3 914 aa6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 RXFP1Q9HBX9 757 aa6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 ARHGEF3Q9NR81 526 aa6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 HELLSQ9NRZ9 838 aa6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 AIPL1Q9NZN9 384 aa6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 KLHL14Q9P2G3 628 aa6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 PARP2Q9UGN5 583 aa6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 RWDD2AQ9UIY3 292 aa6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 MAN1B1Q9UKM7 699 aa6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 CAPN11Q9UMQ6 739 aa6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 ZNF510Q9Y2H8 683 aa6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 SLC27A5Q9Y2P5 690 aa6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 ARL2BPQ9Y2Y0 163 aa6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 USP15Q9Y4E8 981 aaPredicted RBP6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 EMILIN1Q9Y6C2 1016 aa6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 ERCC6L2Q5T890 1561 aa6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 SLIT1O75093 1534 aa6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 CPS1P31327 1500 aa6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 MST1RQ04912 1400 aa6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 STK36Q9NRP7 1315 aa6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 BICDL2A1A5D9 508 aa6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 DPPA5A6NC42 116 aa6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 TMEM110-MUSTN1A8MSY1 372 aa6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 F8VZ95 297 aa6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 M0R2C6 588 aa6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 NDC80O14777 642 aa6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 NVLO15381 856 aaKnown RBP6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 TPD52L2O43399 206 aaKnown RBP6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 CYTH3O43739 400 aa6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 STRNO43815 780 aa6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 CBFA2T3O75081 653 aa6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 TAF5LO75529 589 aa6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 ZNF189O75820 626 aaPredicted RBP6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 DCTN3O75935 186 aa6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 FGFR1OPO95684 399 aaKnown RBP6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 HNRNPCP07910 306 aaKnown RBP eCLIP6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 MMEP08473 750 aa6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 XBP1P17861 261 aa6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 DRD4P21917 467 aa6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 KCNA3P22001 575 aa6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 S100A1P23297 94 aa6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 SARSP49591 514 aaKnown RBP6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 SEC24CP53992 1094 aa6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 KIF23Q02241 960 aaPredicted RBP6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 C2orf54Q08AI8 447 aa6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 CBX3Q13185 183 aa6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 MPP3Q13368 585 aa6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 SEPT6Q14141 434 aa6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 HLTFQ14527 1009 aaKnown RBP eCLIP6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 MTF1Q14872 753 aa6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 KRT72Q14CN4 511 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms