RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 UGGT1Q9NYU2 1555 aa8.01□□□□□ -1.13
C9orf3-205ENST00000427193 ANKRD30AQ9BXX3 1397 aa8.01□□□□□ -1.13
C9orf3-205ENST00000427193 LRP6O75581 1613 aa8.01□□□□□ -1.13
C9orf3-205ENST00000427193 CACNB2Q08289 660 aaPredicted RBP8.01□□□□□ -1.13
C9orf3-205ENST00000427193 ADGRG2Q8IZP9 1017 aa8.01□□□□□ -1.13
C9orf3-205ENST00000427193 BVESQ8NE79 360 aa8.01□□□□□ -1.13
C9orf3-205ENST00000427193 COPS5Q92905 334 aa8.01□□□□□ -1.13
C9orf3-205ENST00000427193 MMP19Q99542 508 aa8.01□□□□□ -1.13
C9orf3-205ENST00000427193 APBA2Q99767 749 aa8.01□□□□□ -1.13
C9orf3-205ENST00000427193 SPATA25Q9BR10 227 aa8.01□□□□□ -1.13
C9orf3-205ENST00000427193 TGIF2Q9GZN2 237 aa8.01□□□□□ -1.13
C9orf3-205ENST00000427193 BCAS3Q9H6U6 928 aa8.01□□□□□ -1.13
C9orf3-205ENST00000427193 USP40Q9NVE5 1235 aa8.01□□□□□ -1.13
C9orf3-205ENST00000427193 APEX2Q9UBZ4 518 aa8.01□□□□□ -1.13
C9orf3-205ENST00000427193 SETD5Q9C0A6 1442 aa8.01□□□□□ -1.13
C9orf3-205ENST00000427193 ATP7AQ04656 1500 aa8□□□□□ -1.13
C9orf3-205ENST00000427193 A0A1B0GTL3 188 aa8□□□□□ -1.13
C9orf3-205ENST00000427193 TSPY4P0CV99 314 aa8□□□□□ -1.13
C9orf3-205ENST00000427193 TSPY10P0CW01 314 aa8□□□□□ -1.13
C9orf3-205ENST00000427193 NT5DC1Q5TFE4 455 aa8□□□□□ -1.13
C9orf3-205ENST00000427193 C9orf131Q5VYM1 1079 aa8□□□□□ -1.13
C9orf3-205ENST00000427193 CARFQ8N187 725 aa8□□□□□ -1.13
C9orf3-205ENST00000427193 FAM169BQ8N8A8 192 aa8□□□□□ -1.13
C9orf3-205ENST00000427193 SMARCC2Q8TAQ2 1214 aa8□□□□□ -1.13
C9orf3-205ENST00000427193 SPATA31A6Q5VVP1 1343 aa8□□□□□ -1.13
C9orf3-205ENST00000427193 TMEM94Q12767 1356 aa7.99□□□□□ -1.13
C9orf3-205ENST00000427193 DHX29Q7Z478 1369 aaKnown RBP7.99□□□□□ -1.13
C9orf3-205ENST00000427193 KIF15Q9NS87 1388 aa7.99□□□□□ -1.13
C9orf3-205ENST00000427193 XIRP1Q702N8 1843 aaKnown RBP7.99□□□□□ -1.13
C9orf3-205ENST00000427193 KCNH1O95259 989 aa7.99□□□□□ -1.13
C9orf3-205ENST00000427193 SCRN1Q12765 414 aa7.99□□□□□ -1.13
C9orf3-205ENST00000427193 RTP5Q14D33 572 aa7.99□□□□□ -1.13
C9orf3-205ENST00000427193 NCAPHQ15003 741 aa7.99□□□□□ -1.13
C9orf3-205ENST00000427193 DCP2Q8IU60 420 aaKnown RBP7.99□□□□□ -1.13
C9orf3-205ENST00000427193 ERBINQ96RT1 1412 aa7.99□□□□□ -1.13
C9orf3-205ENST00000427193 BDH2Q9BUT1 245 aa7.99□□□□□ -1.13
C9orf3-205ENST00000427193 CLEC1BQ9P126 229 aa7.99□□□□□ -1.13
C9orf3-205ENST00000427193 ANKRD50Q9ULJ7 1429 aa7.99□□□□□ -1.13
C9orf3-205ENST00000427193 ZC3H13Q5T200 1668 aaKnown RBP7.98□□□□□ -1.13
C9orf3-205ENST00000427193 ADGBQ8N7X0 1667 aa7.98□□□□□ -1.13
C9orf3-205ENST00000427193 ROBO1Q9Y6N7 1651 aa7.98□□□□□ -1.13
C9orf3-205ENST00000427193 DUOX2Q9NRD8 1548 aa7.98□□□□□ -1.13
C9orf3-205ENST00000427193 RAB3GAP2Q9H2M9 1393 aa7.98□□□□□ -1.13
C9orf3-205ENST00000427193 NOP56O00567 594 aaKnown RBP7.98□□□□□ -1.13
C9orf3-205ENST00000427193 PRICKLE3O43900 615 aaPredicted RBP7.98□□□□□ -1.13
C9orf3-205ENST00000427193 FUCA1P04066 466 aa7.98□□□□□ -1.13
C9orf3-205ENST00000427193 NTRK1P04629 796 aa7.98□□□□□ -1.13
C9orf3-205ENST00000427193 ADRB1P08588 477 aa7.98□□□□□ -1.13
C9orf3-205ENST00000427193 PLS3P13797 630 aa7.98□□□□□ -1.13
C9orf3-205ENST00000427193 NFKB2Q00653 900 aa7.98□□□□□ -1.13
C9orf3-205ENST00000427193 PLP2Q04941 152 aa7.98□□□□□ -1.13
C9orf3-205ENST00000427193 EFEMP1Q12805 493 aa7.98□□□□□ -1.13
C9orf3-205ENST00000427193 SPATS1Q496A3 300 aa7.98□□□□□ -1.13
C9orf3-205ENST00000427193 UBXN11Q5T124 520 aa7.98□□□□□ -1.13
C9orf3-205ENST00000427193 NTMQ9P121 344 aa7.98□□□□□ -1.13
C9orf3-205ENST00000427193 CNOT11Q9UKZ1 510 aaKnown RBP7.98□□□□□ -1.13
C9orf3-205ENST00000427193 JAG2Q9Y219 1238 aa7.98□□□□□ -1.13
C9orf3-205ENST00000427193 GCC2Q8IWJ2 1684 aa7.98□□□□□ -1.13
C9orf3-205ENST00000427193 SETBP1Q9Y6X0 1596 aa7.97□□□□□ -1.13
C9orf3-205ENST00000427193 KRTAP10-2P60368 255 aa7.97□□□□□ -1.13
C9orf3-205ENST00000427193 TRIM59Q8IWR1 403 aa7.97□□□□□ -1.13
C9orf3-205ENST00000427193 PLEKHO2Q8TD55 490 aa7.97□□□□□ -1.13
C9orf3-205ENST00000427193 BORCS6Q96GS4 357 aa7.97□□□□□ -1.13
C9orf3-205ENST00000427193 NOX5Q96PH1 765 aa7.97□□□□□ -1.13
C9orf3-205ENST00000427193 PCDH18Q9HCL0 1135 aa7.97□□□□□ -1.13
C9orf3-205ENST00000427193 GPRC5CQ9NQ84 441 aa7.97□□□□□ -1.13
C9orf3-205ENST00000427193 CYP26B1Q9NR63 512 aa7.97□□□□□ -1.13
C9orf3-205ENST00000427193 RRP7BPQ9NSQ0 103 aa7.97□□□□□ -1.13
C9orf3-205ENST00000427193 INPP5FQ9Y2H2 1132 aa7.97□□□□□ -1.13
C9orf3-205ENST00000427193 EP400Q96L91 3159 aa7.96□□□□□ -1.13
C9orf3-205ENST00000427193 CYP2C8P10632 490 aa7.96□□□□□ -1.14
C9orf3-205ENST00000427193 SARSP49591 514 aaKnown RBP7.96□□□□□ -1.14
C9orf3-205ENST00000427193 GJA9P57773 515 aa7.96□□□□□ -1.14
C9orf3-205ENST00000427193 MEX3CQ5U5Q3 659 aaKnown RBP7.96□□□□□ -1.14
C9orf3-205ENST00000427193 MBLAC2Q68D91 279 aa7.96□□□□□ -1.14
C9orf3-205ENST00000427193 GTF2IRD2BQ6EKJ0 949 aa7.96□□□□□ -1.14
C9orf3-205ENST00000427193 TTLL7Q6ZT98 887 aa7.96□□□□□ -1.14
C9orf3-205ENST00000427193 GTF2IRD2Q86UP8 949 aa7.96□□□□□ -1.14
C9orf3-205ENST00000427193 LINC00482Q8N8I6 264 aa7.96□□□□□ -1.14
C9orf3-205ENST00000427193 ANAPC16Q96DE5 110 aa7.96□□□□□ -1.14
C9orf3-205ENST00000427193 AP5M1Q9H0R1 490 aa7.96□□□□□ -1.14
C9orf3-205ENST00000427193 NKX2-4Q9H2Z4 354 aa7.96□□□□□ -1.14
C9orf3-205ENST00000427193 MARCH2Q9P0N8 246 aa7.96□□□□□ -1.14
C9orf3-205ENST00000427193 RGS12O14924 1447 aa7.95□□□□□ -1.14
C9orf3-205ENST00000427193 SCAF11Q99590 1463 aaKnown RBP7.95□□□□□ -1.14
C9orf3-205ENST00000427193 NOBOXO60393 691 aa7.95□□□□□ -1.14
C9orf3-205ENST00000427193 THBDP07204 575 aa7.95□□□□□ -1.14
C9orf3-205ENST00000427193 IQCEQ6IPM2 695 aa7.95□□□□□ -1.14
C9orf3-205ENST00000427193 DPF3Q92784 378 aa7.95□□□□□ -1.14
C9orf3-205ENST00000427193 ZBTB8AQ96BR9 441 aa7.95□□□□□ -1.14
C9orf3-205ENST00000427193 MRGPRX3Q96LB0 322 aa7.95□□□□□ -1.14
C9orf3-205ENST00000427193 ACBD3Q9H3P7 528 aa7.95□□□□□ -1.14
C9orf3-205ENST00000427193 CCSER2Q9H7U1 834 aa7.95□□□□□ -1.14
C9orf3-205ENST00000427193 SPATA6Q9NWH7 488 aaPredicted RBP7.95□□□□□ -1.14
C9orf3-205ENST00000427193 KIAA1522Q9P206 1035 aaPredicted RBP7.95□□□□□ -1.14
C9orf3-205ENST00000427193 SIT1Q9Y3P8 196 aa7.95□□□□□ -1.14
C9orf3-205ENST00000427193 WASHC2CQ9Y4E1 1318 aa7.95□□□□□ -1.14
C9orf3-205ENST00000427193 PHLPP1O60346 1717 aa7.95□□□□□ -1.14
C9orf3-205ENST00000427193 MROH1Q8NDA8 1641 aa7.94□□□□□ -1.14
C9orf3-205ENST00000427193 SMARCA5O60264 1052 aaPredicted RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms