RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 RRAGDQ9NQL2 400 aaPredicted RBP15.56■□□□□ 0.08
PTPN13-203ENST00000427191 FOXP2O15409 715 aa15.56■□□□□ 0.08
PTPN13-203ENST00000427191 SERPING1P05155 500 aa15.56■□□□□ 0.08
PTPN13-203ENST00000427191 TECP42680 631 aa15.56■□□□□ 0.08
PTPN13-203ENST00000427191 DNAJC24Q6P3W2 148 aa15.56■□□□□ 0.08
PTPN13-203ENST00000427191 LARP4BQ92615 738 aaKnown RBP15.56■□□□□ 0.08
PTPN13-203ENST00000427191 WDR11Q9BZH6 1224 aa15.56■□□□□ 0.08
PTPN13-203ENST00000427191 EPB41L5Q9HCM4 733 aa15.56■□□□□ 0.08
PTPN13-203ENST00000427191 L3MBTL1Q9Y468 752 aa15.56■□□□□ 0.08
PTPN13-203ENST00000427191 TJP3O95049 919 aa15.56■□□□□ 0.08
PTPN13-203ENST00000427191 ANO3Q9BYT9 981 aa15.56■□□□□ 0.08
PTPN13-203ENST00000427191 ATP8A1Q9Y2Q0 1164 aa15.56■□□□□ 0.08
PTPN13-203ENST00000427191 TESPA1A2RU30 521 aaPredicted RBP15.55■□□□□ 0.08
PTPN13-203ENST00000427191 KRT38O76015 456 aa15.55■□□□□ 0.08
PTPN13-203ENST00000427191 SAAL1Q96ER3 474 aa15.55■□□□□ 0.08
PTPN13-203ENST00000427191 KCNJ14Q9UNX9 436 aa15.55■□□□□ 0.08
PTPN13-203ENST00000427191 MAGEA9P43362 315 aa15.55■□□□□ 0.08
PTPN13-203ENST00000427191 DR1Q01658 176 aa15.55■□□□□ 0.08
PTPN13-203ENST00000427191 TRIM67Q6ZTA4 783 aa15.55■□□□□ 0.08
PTPN13-203ENST00000427191 ARMCX2Q7L311 632 aa15.55■□□□□ 0.08
PTPN13-203ENST00000427191 POLE2P56282 527 aa15.55■□□□□ 0.08
PTPN13-203ENST00000427191 DHX9Q08211 1270 aaKnown RBP15.55■□□□□ 0.08
PTPN13-203ENST00000427191 KLC2Q9H0B6 622 aa15.55■□□□□ 0.08
PTPN13-203ENST00000427191 TADA3O75528 432 aa15.55■□□□□ 0.08
PTPN13-203ENST00000427191 TOM1L1O75674 476 aa15.55■□□□□ 0.08
PTPN13-203ENST00000427191 MORF4L2Q15014 288 aa15.55■□□□□ 0.08
PTPN13-203ENST00000427191 MMS22LQ6ZRQ5 1243 aa15.55■□□□□ 0.08
PTPN13-203ENST00000427191 CPXCR1Q8N123 301 aa15.55■□□□□ 0.08
PTPN13-203ENST00000427191 FANCBQ8NB91 859 aa15.55■□□□□ 0.08
PTPN13-203ENST00000427191 MAGEB5Q9BZ81 275 aa15.55■□□□□ 0.08
PTPN13-203ENST00000427191 GCOM2Q9BZD3 368 aaPredicted RBP15.55■□□□□ 0.08
PTPN13-203ENST00000427191 THAP9Q9H5L6 903 aa15.55■□□□□ 0.08
PTPN13-203ENST00000427191 ANLNQ9NQW6 1124 aa15.55■□□□□ 0.08
PTPN13-203ENST00000427191 KIF17Q9P2E2 1029 aa15.55■□□□□ 0.08
PTPN13-203ENST00000427191 GADD45BO75293 160 aaPredicted RBP15.55■□□□□ 0.08
PTPN13-203ENST00000427191 TRMT10CQ7L0Y3 403 aaKnown RBP15.55■□□□□ 0.08
PTPN13-203ENST00000427191 APOBEC2Q9Y235 224 aaKnown RBP15.55■□□□□ 0.08
PTPN13-203ENST00000427191 RPSAP08865 295 aaKnown RBP15.55■□□□□ 0.08
PTPN13-203ENST00000427191 NR2F2P24468 414 aa15.55■□□□□ 0.08
PTPN13-203ENST00000427191 GRAMD1BQ3KR37 738 aa15.55■□□□□ 0.08
PTPN13-203ENST00000427191 FBXO11Q86XK2 927 aa15.55■□□□□ 0.08
PTPN13-203ENST00000427191 PARD3BQ8TEW8 1205 aa15.55■□□□□ 0.08
PTPN13-203ENST00000427191 NAF1Q96HR8 494 aaKnown RBP15.55■□□□□ 0.08
PTPN13-203ENST00000427191 FAM227BQ96M60 508 aa15.55■□□□□ 0.08
PTPN13-203ENST00000427191 GOLGA8TH3BQL2 631 aa15.55■□□□□ 0.08
PTPN13-203ENST00000427191 MEIS1O00470 390 aa15.55■□□□□ 0.08
PTPN13-203ENST00000427191 GOLGA8HP0CJ92 632 aa15.55■□□□□ 0.08
PTPN13-203ENST00000427191 KCTD16Q68DU8 428 aa15.55■□□□□ 0.08
PTPN13-203ENST00000427191 DARS2Q6PI48 645 aaKnown RBP15.55■□□□□ 0.08
PTPN13-203ENST00000427191 MAML1Q92585 1016 aa15.55■□□□□ 0.08
PTPN13-203ENST00000427191 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.55■□□□□ 0.08
PTPN13-203ENST00000427191 PRPSAP2O60256 369 aa15.54■□□□□ 0.08
PTPN13-203ENST00000427191 NNTQ13423 1086 aa15.54■□□□□ 0.08
PTPN13-203ENST00000427191 TTC13Q8NBP0 860 aa15.54■□□□□ 0.08
PTPN13-203ENST00000427191 MCUQ8NE86 351 aa15.54■□□□□ 0.08
PTPN13-203ENST00000427191 SLC7A3Q8WY07 619 aa15.54■□□□□ 0.08
PTPN13-203ENST00000427191 KIF9Q9HAQ2 790 aa15.54■□□□□ 0.08
PTPN13-203ENST00000427191 FANCLQ9NW38 375 aa15.54■□□□□ 0.08
PTPN13-203ENST00000427191 LMCD1Q9NZU5 365 aa15.54■□□□□ 0.08
PTPN13-203ENST00000427191 TNNQ9UQP3 1299 aa15.54■□□□□ 0.08
PTPN13-203ENST00000427191 CFAP74Q9C0B2 1584 aa15.54■□□□□ 0.08
PTPN13-203ENST00000427191 ARHGAP31Q2M1Z3 1444 aa15.54■□□□□ 0.08
PTPN13-203ENST00000427191 CFAP73A6NFT4 308 aa15.54■□□□□ 0.08
PTPN13-203ENST00000427191 KRT1P04264 644 aa15.54■□□□□ 0.08
PTPN13-203ENST00000427191 IFNAR2P48551 515 aa15.54■□□□□ 0.08
PTPN13-203ENST00000427191 ZC3H18Q86VM9 953 aaKnown RBP15.54■□□□□ 0.08
PTPN13-203ENST00000427191 RNF26Q9BY78 433 aaPredicted RBP15.54■□□□□ 0.08
PTPN13-203ENST00000427191 GOLGA8JA6NMD2 632 aa15.54■□□□□ 0.08
PTPN13-203ENST00000427191 LRRC63Q05C16 580 aa15.54■□□□□ 0.08
PTPN13-203ENST00000427191 CTDSPL2Q05D32 466 aa15.54■□□□□ 0.08
PTPN13-203ENST00000427191 MESDQ14696 234 aa15.54■□□□□ 0.08
PTPN13-203ENST00000427191 DLGAP5Q15398 846 aa15.54■□□□□ 0.08
PTPN13-203ENST00000427191 TCP11X2Q5H9J9 407 aa15.54■□□□□ 0.08
PTPN13-203ENST00000427191 ODR4Q5SWX8 454 aa15.54■□□□□ 0.08
PTPN13-203ENST00000427191 ADD3Q9UEY8 706 aaKnown RBP15.54■□□□□ 0.08
PTPN13-203ENST00000427191 ZNF658Q5TYW1 1059 aaPredicted RBP15.54■□□□□ 0.08
PTPN13-203ENST00000427191 NUDCD3Q8IVD9 361 aa15.54■□□□□ 0.08
PTPN13-203ENST00000427191 SYT2Q8N9I0 419 aaPredicted RBP15.54■□□□□ 0.08
PTPN13-203ENST00000427191 DBNDD2Q9BQY9 259 aa15.54■□□□□ 0.08
PTPN13-203ENST00000427191 SEMA3EO15041 775 aa15.54■□□□□ 0.08
PTPN13-203ENST00000427191 SMARCA1P28370 1054 aa15.54■□□□□ 0.08
PTPN13-203ENST00000427191 ATICP31939 592 aa15.54■□□□□ 0.08
PTPN13-203ENST00000427191 DRP2Q13474 957 aa15.54■□□□□ 0.08
PTPN13-203ENST00000427191 ANO5Q75V66 913 aa15.54■□□□□ 0.08
PTPN13-203ENST00000427191 LARGE2Q8N3Y3 721 aa15.54■□□□□ 0.08
PTPN13-203ENST00000427191 FAM95CA0A1B0GW59 222 aa15.54■□□□□ 0.08
PTPN13-203ENST00000427191 RDH13Q8NBN7 331 aa15.54■□□□□ 0.08
PTPN13-203ENST00000427191 GCNT4Q9P109 453 aa15.54■□□□□ 0.08
PTPN13-203ENST00000427191 GPATCH8Q9UKJ3 1502 aaKnown RBP15.54■□□□□ 0.08
PTPN13-203ENST00000427191 CA4P22748 312 aa15.53■□□□□ 0.08
PTPN13-203ENST00000427191 STAT2P52630 851 aa15.53■□□□□ 0.08
PTPN13-203ENST00000427191 ME3Q16798 604 aa15.53■□□□□ 0.08
PTPN13-203ENST00000427191 SYMPKQ92797 1274 aaKnown RBP15.53■□□□□ 0.08
PTPN13-203ENST00000427191 CHUKO15111 745 aa15.53■□□□□ 0.08
PTPN13-203ENST00000427191 GYG2O15488 501 aa15.53■□□□□ 0.08
PTPN13-203ENST00000427191 MIS18BP1Q6P0N0 1132 aa15.53■□□□□ 0.08
PTPN13-203ENST00000427191 FRA10AC1Q70Z53 315 aa15.53■□□□□ 0.08
PTPN13-203ENST00000427191 C17orf53Q8N3J3 647 aaPredicted RBP15.53■□□□□ 0.08
PTPN13-203ENST00000427191 ZSWIM6Q9HCJ5 1215 aa15.53■□□□□ 0.08
PTPN13-203ENST00000427191 LRRIQ4A6NIV6 560 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms