RNA–Protein interactions for RNA: ENST00000415455.5

MUC4-206, Transcript of mucin 4, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC4, Length 3,716 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-206ENST00000415455 SRGAP2O75044 1071 aa12.18□□□□□ -0.46
MUC4-206ENST00000415455 RPS12P25398 132 aaKnown RBP12.18□□□□□ -0.46
MUC4-206ENST00000415455 ERCC5P28715 1186 aaPredicted RBP12.18□□□□□ -0.46
MUC4-206ENST00000415455 ODF2Q5BJF6 829 aa12.18□□□□□ -0.46
MUC4-206ENST00000415455 SNRNP48Q6IEG0 339 aaKnown RBP12.18□□□□□ -0.46
MUC4-206ENST00000415455 CEP112Q8N8E3 955 aa12.18□□□□□ -0.46
MUC4-206ENST00000415455 RGS22Q8NE09 1264 aa12.18□□□□□ -0.46
MUC4-206ENST00000415455 AK8Q96MA6 479 aa12.18□□□□□ -0.46
MUC4-206ENST00000415455 ALS2CR12Q96Q35 445 aa12.18□□□□□ -0.46
MUC4-206ENST00000415455 ELP3Q9H9T3 547 aa12.18□□□□□ -0.46
MUC4-206ENST00000415455 RGL1Q9NZL6 768 aa12.18□□□□□ -0.46
MUC4-206ENST00000415455 TMX2Q9Y320 296 aa12.18□□□□□ -0.46
MUC4-206ENST00000415455 EPN1Q9Y6I3 576 aaPredicted RBP12.18□□□□□ -0.46
MUC4-206ENST00000415455 CD44P16070 742 aaKnown RBP12.18□□□□□ -0.46
MUC4-206ENST00000415455 KRT83P78385 493 aa12.18□□□□□ -0.46
MUC4-206ENST00000415455 NCAPHQ15003 741 aa12.18□□□□□ -0.46
MUC4-206ENST00000415455 APOBEC3FQ8IUX4 373 aaKnown RBP12.18□□□□□ -0.46
MUC4-206ENST00000415455 ATG4CQ96DT6 458 aa12.18□□□□□ -0.46
MUC4-206ENST00000415455 FEM1BQ9UK73 627 aa12.18□□□□□ -0.46
MUC4-206ENST00000415455 PCDHB13Q9Y5F0 798 aa12.18□□□□□ -0.46
MUC4-206ENST00000415455 ZNF541Q9H0D2 1346 aa12.18□□□□□ -0.46
MUC4-206ENST00000415455 ARHGEF35A5YM69 484 aa12.18□□□□□ -0.46
MUC4-206ENST00000415455 PPP1R11O60927 126 aaPredicted RBP12.18□□□□□ -0.46
MUC4-206ENST00000415455 TACC1O75410 805 aa12.18□□□□□ -0.46
MUC4-206ENST00000415455 TFRCP02786 760 aaKnown RBP12.18□□□□□ -0.46
MUC4-206ENST00000415455 GCFC2P16383 781 aaKnown RBP12.18□□□□□ -0.46
MUC4-206ENST00000415455 OAS2P29728 719 aaKnown RBP12.18□□□□□ -0.46
MUC4-206ENST00000415455 USP14P54578 494 aa12.18□□□□□ -0.46
MUC4-206ENST00000415455 SF3A3Q12874 501 aaKnown RBP eCLIP12.18□□□□□ -0.46
MUC4-206ENST00000415455 SLFN12Q8IYM2 578 aa12.18□□□□□ -0.46
MUC4-206ENST00000415455 PLCD3Q8N3E9 789 aa12.18□□□□□ -0.46
MUC4-206ENST00000415455 MYCT1Q8N699 235 aa12.18□□□□□ -0.46
MUC4-206ENST00000415455 BHMT2Q9H2M3 363 aa12.18□□□□□ -0.46
MUC4-206ENST00000415455 BRWD3Q6RI45 1802 aa12.17□□□□□ -0.46
MUC4-206ENST00000415455 IBSPP21815 317 aaPredicted RBP12.17□□□□□ -0.46
MUC4-206ENST00000415455 FXR1P51114 621 aaKnown RBP eCLIP12.17□□□□□ -0.46
MUC4-206ENST00000415455 NPY5RQ15761 445 aa12.17□□□□□ -0.46
MUC4-206ENST00000415455 MIER3Q7Z3K6 550 aa12.17□□□□□ -0.46
MUC4-206ENST00000415455 FAM83AQ86UY5 434 aa12.17□□□□□ -0.46
MUC4-206ENST00000415455 RMDN3Q96TC7 470 aa12.17□□□□□ -0.46
MUC4-206ENST00000415455 GTPBP4Q9BZE4 634 aaKnown RBP12.17□□□□□ -0.46
MUC4-206ENST00000415455 PANK4Q9NVE7 773 aa12.17□□□□□ -0.46
MUC4-206ENST00000415455 TRIM10Q9UDY6 481 aa12.17□□□□□ -0.46
MUC4-206ENST00000415455 TUBE1Q9UJT0 475 aa12.17□□□□□ -0.46
MUC4-206ENST00000415455 ADM5C9JUS6 153 aa12.17□□□□□ -0.46
MUC4-206ENST00000415455 GCNT3O95395 438 aa12.17□□□□□ -0.46
MUC4-206ENST00000415455 MAGEA1P43355 309 aa12.17□□□□□ -0.46
MUC4-206ENST00000415455 DDX12PQ92771 950 aa12.17□□□□□ -0.46
MUC4-206ENST00000415455 CHP1Q99653 195 aa12.17□□□□□ -0.46
MUC4-206ENST00000415455 NT5C3AQ9H0P0 336 aa12.17□□□□□ -0.46
MUC4-206ENST00000415455 MRPL44Q9H9J2 332 aaKnown RBP12.17□□□□□ -0.46
MUC4-206ENST00000415455 CAPN2P17655 700 aa12.16□□□□□ -0.46
MUC4-206ENST00000415455 TATDN1Q6P1N9 297 aa12.16□□□□□ -0.46
MUC4-206ENST00000415455 ZNF280CQ8ND82 737 aa12.16□□□□□ -0.46
MUC4-206ENST00000415455 RNF146Q9NTX7 359 aa12.16□□□□□ -0.46
MUC4-206ENST00000415455 MYH7P12883 1935 aa12.16□□□□□ -0.46
MUC4-206ENST00000415455 ROBO3Q96MS0 1386 aa12.16□□□□□ -0.46
MUC4-206ENST00000415455 TMEM110-MUSTN1A8MSY1 372 aa12.16□□□□□ -0.46
MUC4-206ENST00000415455 RNF207Q6ZRF8 634 aa12.16□□□□□ -0.46
MUC4-206ENST00000415455 GBP3Q9H0R5 595 aa12.16□□□□□ -0.46
MUC4-206ENST00000415455 NPHP3-ACAD11A0A0J9YXS1 232 aa12.16□□□□□ -0.46
MUC4-206ENST00000415455 PLA2G4BP0C869 781 aa12.16□□□□□ -0.46
MUC4-206ENST00000415455 LLGL1Q15334 1064 aa12.16□□□□□ -0.46
MUC4-206ENST00000415455 IL17AQ16552 155 aa12.16□□□□□ -0.46
MUC4-206ENST00000415455 ZNF658Q5TYW1 1059 aaPredicted RBP12.16□□□□□ -0.46
MUC4-206ENST00000415455 MOB2Q70IA6 237 aa12.16□□□□□ -0.46
MUC4-206ENST00000415455 NLRX1Q86UT6 975 aa12.16□□□□□ -0.46
MUC4-206ENST00000415455 MCF2L2Q86YR7 1114 aa12.16□□□□□ -0.46
MUC4-206ENST00000415455 IFIH1Q9BYX4 1025 aaKnown RBP12.16□□□□□ -0.46
MUC4-206ENST00000415455 HDAC6Q9UBN7 1215 aa12.16□□□□□ -0.46
MUC4-206ENST00000415455 WNK3Q9BYP7 1800 aa12.15□□□□□ -0.46
MUC4-206ENST00000415455 NFIBO00712 420 aa12.15□□□□□ -0.46
MUC4-206ENST00000415455 BMP6P22004 513 aa12.15□□□□□ -0.46
MUC4-206ENST00000415455 SMARCA1P28370 1054 aa12.15□□□□□ -0.46
MUC4-206ENST00000415455 FAM26FQ5R3K3 315 aa12.15□□□□□ -0.46
MUC4-206ENST00000415455 NUDT12Q9BQG2 462 aa12.15□□□□□ -0.46
MUC4-206ENST00000415455 SYT17Q9BSW7 474 aa12.15□□□□□ -0.46
MUC4-206ENST00000415455 CCDC169A6NNP5 214 aa12.15□□□□□ -0.46
MUC4-206ENST00000415455 CTNND1O60716 968 aaKnown RBP12.15□□□□□ -0.46
MUC4-206ENST00000415455 KIF20AO95235 890 aa12.15□□□□□ -0.46
MUC4-206ENST00000415455 AP3B2Q13367 1082 aa12.15□□□□□ -0.46
MUC4-206ENST00000415455 TCP11X2Q5H9J9 407 aa12.15□□□□□ -0.46
MUC4-206ENST00000415455 SEPT14Q6ZU15 432 aa12.15□□□□□ -0.46
MUC4-206ENST00000415455 GMCL1Q96IK5 515 aa12.15□□□□□ -0.46
MUC4-206ENST00000415455 PARD6BQ9BYG5 372 aa12.15□□□□□ -0.46
MUC4-206ENST00000415455 CCDC113Q9H0I3 377 aa12.15□□□□□ -0.46
MUC4-206ENST00000415455 TSPYL1Q9H0U9 437 aa12.15□□□□□ -0.46
MUC4-206ENST00000415455 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.15□□□□□ -0.46
MUC4-206ENST00000415455 SNED1Q8TER0 1413 aa12.15□□□□□ -0.46
MUC4-206ENST00000415455 UTRNP46939 3433 aa12.15□□□□□ -0.46
MUC4-206ENST00000415455 MFAP3LO75121 409 aa12.15□□□□□ -0.46
MUC4-206ENST00000415455 SMC1AQ14683 1233 aaKnown RBP12.15□□□□□ -0.46
MUC4-206ENST00000415455 UTP14CQ5TAP6 766 aaKnown RBP12.15□□□□□ -0.46
MUC4-206ENST00000415455 IQCEQ6IPM2 695 aa12.15□□□□□ -0.46
MUC4-206ENST00000415455 MAATS1Q7Z4T9 603 aa12.15□□□□□ -0.46
MUC4-206ENST00000415455 TAX1BP1Q86VP1 789 aa12.15□□□□□ -0.46
MUC4-206ENST00000415455 BANK1Q8NDB2 785 aa12.15□□□□□ -0.46
MUC4-206ENST00000415455 RABGAP1Q9Y3P9 1069 aa12.15□□□□□ -0.46
MUC4-206ENST00000415455 TTC26A0AVF1 554 aa12.14□□□□□ -0.47
MUC4-206ENST00000415455 IREB2P48200 963 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms