RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 TRPC1P48995 793 aa22.41■■□□□ 1.18
AP1S3-205ENST00000415298 TCP10Q12799 353 aa22.41■■□□□ 1.18
AP1S3-205ENST00000415298 BTG3Q14201 252 aaPredicted RBP22.41■■□□□ 1.18
AP1S3-205ENST00000415298 FERMT3Q86UX7 667 aa22.41■■□□□ 1.18
AP1S3-205ENST00000415298 CCDC83Q8IWF9 413 aa22.41■■□□□ 1.18
AP1S3-205ENST00000415298 SPIRE2Q8WWL2 714 aa22.41■■□□□ 1.18
AP1S3-205ENST00000415298 OPTNQ96CV9 577 aa22.41■■□□□ 1.18
AP1S3-205ENST00000415298 FLT1P17948 1338 aa22.41■■□□□ 1.18
AP1S3-205ENST00000415298 WNT10BO00744 389 aa22.4■■□□□ 1.18
AP1S3-205ENST00000415298 PLCG2P16885 1265 aa22.4■■□□□ 1.18
AP1S3-205ENST00000415298 TBC1D10BQ4KMP7 808 aaPredicted RBP22.4■■□□□ 1.18
AP1S3-205ENST00000415298 LACTB2Q53H82 288 aaPredicted RBP22.4■■□□□ 1.18
AP1S3-205ENST00000415298 LARP1BQ659C4 914 aaKnown RBP22.4■■□□□ 1.18
AP1S3-205ENST00000415298 SNRNP27Q8WVK2 155 aaKnown RBP22.4■■□□□ 1.18
AP1S3-205ENST00000415298 TCEANC2Q96MN5 208 aa22.4■■□□□ 1.18
AP1S3-205ENST00000415298 CCT8L2Q96SF2 557 aa22.4■■□□□ 1.18
AP1S3-205ENST00000415298 E7EWF7 191 aa22.4■■□□□ 1.18
AP1S3-205ENST00000415298 HARSP12081 509 aaKnown RBP22.4■■□□□ 1.18
AP1S3-205ENST00000415298 EPS15P42566 896 aa22.4■■□□□ 1.18
AP1S3-205ENST00000415298 PSMC4P43686 418 aa22.4■■□□□ 1.18
AP1S3-205ENST00000415298 PLCD1P51178 756 aa22.4■■□□□ 1.18
AP1S3-205ENST00000415298 NOA1Q8NC60 698 aaKnown RBP22.4■■□□□ 1.18
AP1S3-205ENST00000415298 DPF2Q92785 391 aa22.4■■□□□ 1.18
AP1S3-205ENST00000415298 OSBPL7Q9BZF2 842 aa22.4■■□□□ 1.18
AP1S3-205ENST00000415298 ASTN2O75129 1339 aaPredicted RBP22.39■■□□□ 1.18
AP1S3-205ENST00000415298 STX10O60499 249 aa22.39■■□□□ 1.18
AP1S3-205ENST00000415298 SLURP2P0DP57 97 aa22.39■■□□□ 1.18
AP1S3-205ENST00000415298 EPB41P11171 864 aaKnown RBP22.39■■□□□ 1.18
AP1S3-205ENST00000415298 XBP1P17861 261 aa22.39■■□□□ 1.18
AP1S3-205ENST00000415298 RPS12P25398 132 aaKnown RBP22.39■■□□□ 1.18
AP1S3-205ENST00000415298 MYCBPAPQ8TBZ2 947 aa22.39■■□□□ 1.18
AP1S3-205ENST00000415298 TMCO1Q9UM00 188 aa22.39■■□□□ 1.18
AP1S3-205ENST00000415298 TIAM2Q8IVF5 1701 aa22.39■■□□□ 1.18
AP1S3-205ENST00000415298 SRRM3A6NNA2 597 aaPredicted RBP22.39■■□□□ 1.17
AP1S3-205ENST00000415298 KIF5CO60282 957 aa22.39■■□□□ 1.17
AP1S3-205ENST00000415298 DIAPH2O60879 1101 aa22.39■■□□□ 1.17
AP1S3-205ENST00000415298 VIMP08670 466 aaKnown RBP22.39■■□□□ 1.17
AP1S3-205ENST00000415298 PPARAQ07869 468 aa22.39■■□□□ 1.17
AP1S3-205ENST00000415298 KARSQ15046 597 aaKnown RBP22.39■■□□□ 1.17
AP1S3-205ENST00000415298 NLRP14Q86W24 1093 aa22.39■■□□□ 1.17
AP1S3-205ENST00000415298 GPCPD1Q9NPB8 672 aa22.39■■□□□ 1.17
AP1S3-205ENST00000415298 KIF5BP33176 963 aa22.38■■□□□ 1.17
AP1S3-205ENST00000415298 ZNF280AP59817 542 aaPredicted RBP22.38■■□□□ 1.17
AP1S3-205ENST00000415298 TOGARAM2Q6ZUX3 1019 aa22.38■■□□□ 1.17
AP1S3-205ENST00000415298 N4BP3O15049 544 aa22.38■■□□□ 1.17
AP1S3-205ENST00000415298 FAM107AO95990 144 aa22.38■■□□□ 1.17
AP1S3-205ENST00000415298 MYBL1P10243 752 aa22.38■■□□□ 1.17
AP1S3-205ENST00000415298 CHST3Q7LGC8 479 aa22.38■■□□□ 1.17
AP1S3-205ENST00000415298 FAM198AQ9UFP1 575 aa22.38■■□□□ 1.17
AP1S3-205ENST00000415298 PDCP20941 246 aa22.37■■□□□ 1.17
AP1S3-205ENST00000415298 USP14P54578 494 aa22.37■■□□□ 1.17
AP1S3-205ENST00000415298 FANCCQ00597 558 aa22.37■■□□□ 1.17
AP1S3-205ENST00000415298 AKAP17AQ02040 695 aaKnown RBP22.37■■□□□ 1.17
AP1S3-205ENST00000415298 LZICQ8WZA0 190 aa22.37■■□□□ 1.17
AP1S3-205ENST00000415298 P3H4Q92791 437 aa22.37■■□□□ 1.17
AP1S3-205ENST00000415298 GPRC5DQ9NZD1 345 aa22.37■■□□□ 1.17
AP1S3-205ENST00000415298 PAIP2BQ9ULR5 123 aaKnown RBP22.37■■□□□ 1.17
AP1S3-205ENST00000415298 ZMYM6O95789 1325 aa22.37■■□□□ 1.17
AP1S3-205ENST00000415298 A0A087WWV3 80 aa22.37■■□□□ 1.17
AP1S3-205ENST00000415298 PTGISQ16647 500 aa22.37■■□□□ 1.17
AP1S3-205ENST00000415298 CCDC155Q8N6L0 562 aa22.37■■□□□ 1.17
AP1S3-205ENST00000415298 DYNLL2Q96FJ2 89 aa22.37■■□□□ 1.17
AP1S3-205ENST00000415298 ZBED3Q96IU2 234 aaPredicted RBP22.37■■□□□ 1.17
AP1S3-205ENST00000415298 FAM167BQ9BTA0 163 aa22.37■■□□□ 1.17
AP1S3-205ENST00000415298 SELENOOQ9BVL4 669 aa22.37■■□□□ 1.17
AP1S3-205ENST00000415298 CTAGE9A4FU28 777 aa22.36■■□□□ 1.17
AP1S3-205ENST00000415298 TCP10L2B9ZVM9 353 aa22.36■■□□□ 1.17
AP1S3-205ENST00000415298 CBFA2T2O43439 604 aa22.36■■□□□ 1.17
AP1S3-205ENST00000415298 CEBPZQ03701 1054 aaKnown RBP22.36■■□□□ 1.17
AP1S3-205ENST00000415298 PUS10Q3MIT2 529 aaKnown RBP22.36■■□□□ 1.17
AP1S3-205ENST00000415298 ZSCAN31Q96LW9 406 aaPredicted RBP22.36■■□□□ 1.17
AP1S3-205ENST00000415298 NEK1Q96PY6 1258 aa22.36■■□□□ 1.17
AP1S3-205ENST00000415298 IWS1Q96ST2 819 aa22.36■■□□□ 1.17
AP1S3-205ENST00000415298 SH2B1Q9NRF2 756 aaPredicted RBP22.36■■□□□ 1.17
AP1S3-205ENST00000415298 ZNF70Q9UC06 446 aaPredicted RBP22.36■■□□□ 1.17
AP1S3-205ENST00000415298 PRDM1O75626 825 aa22.36■■□□□ 1.17
AP1S3-205ENST00000415298 ZBTB8BQ8NAP8 495 aaPredicted RBP22.36■■□□□ 1.17
AP1S3-205ENST00000415298 TRPM4Q8TD43 1214 aa22.36■■□□□ 1.17
AP1S3-205ENST00000415298 DYDC1Q8WWB3 177 aa22.36■■□□□ 1.17
AP1S3-205ENST00000415298 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.36■■□□□ 1.17
AP1S3-205ENST00000415298 NEDD4P46934 1319 aa22.36■■□□□ 1.17
AP1S3-205ENST00000415298 ECM29Q5VYK3 1845 aa22.36■■□□□ 1.17
AP1S3-205ENST00000415298 LARGE1O95461 756 aa22.35■■□□□ 1.17
AP1S3-205ENST00000415298 POLR3DP05423 398 aaPredicted RBP22.35■■□□□ 1.17
AP1S3-205ENST00000415298 ZFXP17010 805 aaPredicted RBP22.35■■□□□ 1.17
AP1S3-205ENST00000415298 LBRQ14739 615 aaKnown RBP22.35■■□□□ 1.17
AP1S3-205ENST00000415298 SPRED3Q2MJR0 410 aa22.35■■□□□ 1.17
AP1S3-205ENST00000415298 C12orf60Q5U649 245 aa22.35■■□□□ 1.17
AP1S3-205ENST00000415298 ANKRD27Q96NW4 1050 aa22.35■■□□□ 1.17
AP1S3-205ENST00000415298 PCDH18Q9HCL0 1135 aa22.35■■□□□ 1.17
AP1S3-205ENST00000415298 TARSL2A2RTX5 802 aaKnown RBP22.35■■□□□ 1.17
AP1S3-205ENST00000415298 PPP1R37O75864 691 aa22.35■■□□□ 1.17
AP1S3-205ENST00000415298 CA8P35219 290 aa22.35■■□□□ 1.17
AP1S3-205ENST00000415298 CBX3Q13185 183 aa22.35■■□□□ 1.17
AP1S3-205ENST00000415298 MTMR14Q8NCE2 650 aa22.35■■□□□ 1.17
AP1S3-205ENST00000415298 LRRC2Q9BYS8 371 aa22.35■■□□□ 1.17
AP1S3-205ENST00000415298 ZSWIM6Q9HCJ5 1215 aa22.35■■□□□ 1.17
AP1S3-205ENST00000415298 SPDYE5A6NIY4 337 aa22.34■■□□□ 1.17
AP1S3-205ENST00000415298 TOP1P11387 765 aaKnown RBP22.34■■□□□ 1.17
AP1S3-205ENST00000415298 HIBCHQ6NVY1 386 aaPredicted RBP22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms