RNA–Protein interactions for RNA: ENST00000412685.6

HCG18-233, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 2,552 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-233ENST00000412685 MMRN2Q9H8L6 949 aa18.26■□□□□ 0.51
HCG18-233ENST00000412685 PLAGL2Q9UPG8 496 aa18.26■□□□□ 0.51
HCG18-233ENST00000412685 COL4A3BPQ9Y5P4 624 aa18.26■□□□□ 0.51
HCG18-233ENST00000412685 FHOD1Q9Y613 1164 aa18.26■□□□□ 0.51
HCG18-233ENST00000412685 ARSHQ5FYA8 562 aa18.26■□□□□ 0.51
HCG18-233ENST00000412685 ACER1Q8TDN7 264 aa18.26■□□□□ 0.51
HCG18-233ENST00000412685 FAM20AQ96MK3 541 aa18.26■□□□□ 0.51
HCG18-233ENST00000412685 ZNF70Q9UC06 446 aaPredicted RBP18.26■□□□□ 0.51
HCG18-233ENST00000412685 PSME4Q14997 1843 aa18.25■□□□□ 0.51
HCG18-233ENST00000412685 FRMD3A2A2Y4 597 aa18.25■□□□□ 0.51
HCG18-233ENST00000412685 PSMD14O00487 310 aa18.25■□□□□ 0.51
HCG18-233ENST00000412685 KRT18P05783 430 aaKnown RBP18.25■□□□□ 0.51
HCG18-233ENST00000412685 RPA1P27694 616 aa18.25■□□□□ 0.51
HCG18-233ENST00000412685 EN1Q05925 392 aaPredicted RBP18.25■□□□□ 0.51
HCG18-233ENST00000412685 DLGAP5Q15398 846 aa18.25■□□□□ 0.51
HCG18-233ENST00000412685 KIAA1755Q5JYT7 1200 aa18.25■□□□□ 0.51
HCG18-233ENST00000412685 FAM151AQ8WW52 585 aa18.25■□□□□ 0.51
HCG18-233ENST00000412685 JAKMIP2Q96AA8 810 aa18.25■□□□□ 0.51
HCG18-233ENST00000412685 PARD6BQ9BYG5 372 aa18.25■□□□□ 0.51
HCG18-233ENST00000412685 ZHX1Q9UKY1 873 aaPredicted RBP18.25■□□□□ 0.51
HCG18-233ENST00000412685 PITPNM2Q9BZ72 1349 aa18.25■□□□□ 0.51
HCG18-233ENST00000412685 PIK3CDO00329 1044 aa18.25■□□□□ 0.51
HCG18-233ENST00000412685 KRT86O43790 486 aa18.25■□□□□ 0.51
HCG18-233ENST00000412685 TFRCP02786 760 aaKnown RBP18.25■□□□□ 0.51
HCG18-233ENST00000412685 SPATA31C1P0DKV0 1188 aa18.25■□□□□ 0.51
HCG18-233ENST00000412685 AMPD2Q01433 879 aa18.25■□□□□ 0.51
HCG18-233ENST00000412685 WHAMMP3Q1A5X7 153 aa18.25■□□□□ 0.51
HCG18-233ENST00000412685 NELFCDQ8IXH7 590 aa18.25■□□□□ 0.51
HCG18-233ENST00000412685 CCDC42Q96M95 316 aa18.25■□□□□ 0.51
HCG18-233ENST00000412685 GMLQ99445 158 aa18.25■□□□□ 0.51
HCG18-233ENST00000412685 TMX2Q9Y320 296 aa18.25■□□□□ 0.51
HCG18-233ENST00000412685 MSH4O15457 936 aa18.24■□□□□ 0.51
HCG18-233ENST00000412685 VIL1P09327 827 aaKnown RBP18.24■□□□□ 0.51
HCG18-233ENST00000412685 PNMA6AP0CW24 399 aaPredicted RBP18.24■□□□□ 0.51
HCG18-233ENST00000412685 GRIPAP1Q4V328 841 aa18.24■□□□□ 0.51
HCG18-233ENST00000412685 TTLL6Q8N841 843 aa18.24■□□□□ 0.51
HCG18-233ENST00000412685 SCFD1Q8WVM8 642 aa18.24■□□□□ 0.51
HCG18-233ENST00000412685 CEP63Q96MT8 703 aa18.24■□□□□ 0.51
HCG18-233ENST00000412685 CAMKK2Q96RR4 588 aa18.24■□□□□ 0.51
HCG18-233ENST00000412685 TANGO6Q9C0B7 1094 aa18.24■□□□□ 0.51
HCG18-233ENST00000412685 LACRTQ9GZZ8 138 aa18.24■□□□□ 0.51
HCG18-233ENST00000412685 HDAC9Q9UKV0 1011 aa18.24■□□□□ 0.51
HCG18-233ENST00000412685 MYO6Q9UM54 1294 aa18.24■□□□□ 0.51
HCG18-233ENST00000412685 RCCD1A6NED2 376 aa18.24■□□□□ 0.51
HCG18-233ENST00000412685 MEIS1O00470 390 aa18.24■□□□□ 0.51
HCG18-233ENST00000412685 PSMC6P62333 389 aa18.24■□□□□ 0.51
HCG18-233ENST00000412685 CCDC40Q4G0X9 1142 aa18.24■□□□□ 0.51
HCG18-233ENST00000412685 RTKN2Q8IZC4 609 aa18.24■□□□□ 0.51
HCG18-233ENST00000412685 LARGE2Q8N3Y3 721 aa18.24■□□□□ 0.51
HCG18-233ENST00000412685 OGFOD1Q8N543 542 aa18.24■□□□□ 0.51
HCG18-233ENST00000412685 EHBP1Q8NDI1 1231 aa18.24■□□□□ 0.51
HCG18-233ENST00000412685 CYP2W1Q8TAV3 490 aa18.24■□□□□ 0.51
HCG18-233ENST00000412685 ZHX3Q9H4I2 956 aa18.24■□□□□ 0.51
HCG18-233ENST00000412685 GOPCQ9HD26 462 aa18.24■□□□□ 0.51
HCG18-233ENST00000412685 EMILIN3Q9NT22 766 aa18.24■□□□□ 0.51
HCG18-233ENST00000412685 ZBTB21Q9ULJ3 1066 aa18.24■□□□□ 0.51
HCG18-233ENST00000412685 DNM3Q9UQ16 869 aa18.24■□□□□ 0.51
HCG18-233ENST00000412685 KIF20AO95235 890 aa18.23■□□□□ 0.51
HCG18-233ENST00000412685 PLEKP08567 350 aaPredicted RBP18.23■□□□□ 0.51
HCG18-233ENST00000412685 CYP3A4P08684 503 aa18.23■□□□□ 0.51
HCG18-233ENST00000412685 CYP27A1Q02318 531 aa18.23■□□□□ 0.51
HCG18-233ENST00000412685 PABPC4Q13310 644 aaKnown RBP eCLIP18.23■□□□□ 0.511e-8■■■■□ 22.8
HCG18-233ENST00000412685 FAM83BQ5T0W9 1011 aa18.23■□□□□ 0.51
HCG18-233ENST00000412685 KCTD10Q9H3F6 313 aa18.23■□□□□ 0.51
HCG18-233ENST00000412685 VAV3Q9UKW4 847 aa18.23■□□□□ 0.51
HCG18-233ENST00000412685 SMCHD1A6NHR9 2005 aa18.23■□□□□ 0.51
HCG18-233ENST00000412685 CNTNAP1P78357 1384 aa18.23■□□□□ 0.51
HCG18-233ENST00000412685 SEC31AO94979 1220 aaKnown RBP18.23■□□□□ 0.51
HCG18-233ENST00000412685 ZNF76P36508 570 aa18.23■□□□□ 0.51
HCG18-233ENST00000412685 TRAF1Q13077 416 aa18.23■□□□□ 0.51
HCG18-233ENST00000412685 CC2D1AQ6P1N0 951 aaPredicted RBP18.23■□□□□ 0.51
HCG18-233ENST00000412685 CCDC155Q8N6L0 562 aa18.23■□□□□ 0.51
HCG18-233ENST00000412685 PSMD1Q99460 953 aa18.23■□□□□ 0.51
HCG18-233ENST00000412685 ZNF277Q9NRM2 450 aaPredicted RBP18.23■□□□□ 0.51
HCG18-233ENST00000412685 ARHGAP20Q9P2F6 1191 aa18.23■□□□□ 0.51
HCG18-233ENST00000412685 STK24Q9Y6E0 443 aa18.23■□□□□ 0.51
HCG18-233ENST00000412685 GNA14O95837 355 aa18.22■□□□□ 0.51
HCG18-233ENST00000412685 SPA17Q15506 151 aa18.22■□□□□ 0.51
HCG18-233ENST00000412685 SPDYE2Q495Y8 402 aa18.22■□□□□ 0.51
HCG18-233ENST00000412685 SYT2Q8N9I0 419 aaPredicted RBP18.22■□□□□ 0.51
HCG18-233ENST00000412685 NEK11Q8NG66 645 aa18.22■□□□□ 0.51
HCG18-233ENST00000412685 ZBTB12Q9Y330 459 aaPredicted RBP18.22■□□□□ 0.51
HCG18-233ENST00000412685 ZNF263O14978 683 aa18.22■□□□□ 0.51
HCG18-233ENST00000412685 VAV2P52735 878 aa18.22■□□□□ 0.51
HCG18-233ENST00000412685 TUBB4BP68371 445 aa18.22■□□□□ 0.51
HCG18-233ENST00000412685 GIT2Q14161 759 aa18.22■□□□□ 0.51
HCG18-233ENST00000412685 RRAGAQ7L523 313 aa18.22■□□□□ 0.51
HCG18-233ENST00000412685 SMCR8Q8TEV9 937 aaPredicted RBP18.22■□□□□ 0.51
HCG18-233ENST00000412685 BAP1Q92560 729 aa18.22■□□□□ 0.51
HCG18-233ENST00000412685 PDGFDQ9GZP0 370 aaPredicted RBP18.22■□□□□ 0.51
HCG18-233ENST00000412685 CTAGE15A4D2H0 777 aa18.21■□□□□ 0.51
HCG18-233ENST00000412685 LRRC53A6NM62 1247 aa18.21■□□□□ 0.51
HCG18-233ENST00000412685 ENC1O14682 589 aa18.21■□□□□ 0.51
HCG18-233ENST00000412685 CTAGE8P0CG41 777 aa18.21■□□□□ 0.51
HCG18-233ENST00000412685 CYP4A11Q02928 519 aa18.21■□□□□ 0.51
HCG18-233ENST00000412685 TRAPPC11Q7Z392 1133 aa18.21■□□□□ 0.51
HCG18-233ENST00000412685 KRT26Q7Z3Y9 468 aa18.21■□□□□ 0.51
HCG18-233ENST00000412685 CTAGE6Q86UF2 777 aa18.21■□□□□ 0.51
HCG18-233ENST00000412685 CTAGE4Q8IX94 777 aa18.21■□□□□ 0.51
HCG18-233ENST00000412685 REEP2Q9BRK0 252 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms