RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 UTYO14607 1347 aa6.54□□□□□ -1.36
LINC00342-201ENST00000412393 ASTN2O75129 1339 aaPredicted RBP6.54□□□□□ -1.36
LINC00342-201ENST00000412393 WDR33Q9C0J8 1336 aaKnown RBP6.54□□□□□ -1.36
LINC00342-201ENST00000412393 SNAP23O00161 211 aa6.54□□□□□ -1.36
LINC00342-201ENST00000412393 PLIN1O60240 522 aa6.54□□□□□ -1.36
LINC00342-201ENST00000412393 NUAK1O60285 661 aa6.54□□□□□ -1.36
LINC00342-201ENST00000412393 TAF5LO75529 589 aa6.54□□□□□ -1.36
LINC00342-201ENST00000412393 CT47B1P0C2W7 299 aaPredicted RBP6.54□□□□□ -1.36
LINC00342-201ENST00000412393 NBPF7P0C2Y1 421 aaPredicted RBP6.54□□□□□ -1.36
LINC00342-201ENST00000412393 XRCC5P13010 732 aaKnown RBP6.54□□□□□ -1.36
LINC00342-201ENST00000412393 HOXA5P20719 270 aa6.54□□□□□ -1.36
LINC00342-201ENST00000412393 KLRK1P26718 216 aa6.54□□□□□ -1.36
LINC00342-201ENST00000412393 DACT2Q5SW24 774 aa6.54□□□□□ -1.36
LINC00342-201ENST00000412393 STRIP1Q5VSL9 837 aa6.54□□□□□ -1.36
LINC00342-201ENST00000412393 TTLL5Q6EMB2 1281 aa6.54□□□□□ -1.36
LINC00342-201ENST00000412393 CYP4F22Q6NT55 531 aa6.54□□□□□ -1.36
LINC00342-201ENST00000412393 DLK2Q6UY11 383 aa6.54□□□□□ -1.36
LINC00342-201ENST00000412393 LDHAL6AQ6ZMR3 332 aa6.54□□□□□ -1.36
LINC00342-201ENST00000412393 SAPCD2Q86UD0 394 aa6.54□□□□□ -1.36
LINC00342-201ENST00000412393 TRMT2AQ8IZ69 625 aaKnown RBP6.54□□□□□ -1.36
LINC00342-201ENST00000412393 KCNB2Q92953 911 aa6.54□□□□□ -1.36
LINC00342-201ENST00000412393 KAZALD1Q96I82 304 aa6.54□□□□□ -1.36
LINC00342-201ENST00000412393 MXD3Q9BW11 206 aa6.54□□□□□ -1.36
LINC00342-201ENST00000412393 EMILIN2Q9BXX0 1053 aa6.54□□□□□ -1.36
LINC00342-201ENST00000412393 NPHS2Q9NP85 383 aa6.54□□□□□ -1.36
LINC00342-201ENST00000412393 MYOZ2Q9NPC6 264 aa6.54□□□□□ -1.36
LINC00342-201ENST00000412393 GGA3Q9NZ52 723 aa6.54□□□□□ -1.36
LINC00342-201ENST00000412393 SMG5Q9UPR3 1016 aaKnown RBP6.54□□□□□ -1.36
LINC00342-201ENST00000412393 MYO3BQ8WXR4 1341 aa6.53□□□□□ -1.36
LINC00342-201ENST00000412393 ADM5C9JUS6 153 aa6.53□□□□□ -1.36
LINC00342-201ENST00000412393 FOXN1O15353 648 aa6.53□□□□□ -1.36
LINC00342-201ENST00000412393 LINC00310P59036 64 aa6.53□□□□□ -1.36
LINC00342-201ENST00000412393 MAP2K1Q02750 393 aaPredicted RBP6.53□□□□□ -1.36
LINC00342-201ENST00000412393 FAAP100Q0VG06 881 aa6.53□□□□□ -1.36
LINC00342-201ENST00000412393 RABL6Q3YEC7 729 aaPredicted RBP6.53□□□□□ -1.36
LINC00342-201ENST00000412393 C15orf52Q6ZUT6 534 aaKnown RBP6.53□□□□□ -1.36
LINC00342-201ENST00000412393 ZNF804AQ7Z570 1209 aa6.53□□□□□ -1.36
LINC00342-201ENST00000412393 C2orf69Q8N8R5 385 aa6.53□□□□□ -1.36
LINC00342-201ENST00000412393 BICC1Q9H694 974 aaKnown RBP6.53□□□□□ -1.36
LINC00342-201ENST00000412393 GBA2Q9HCG7 927 aaPredicted RBP6.53□□□□□ -1.36
LINC00342-201ENST00000412393 CD209Q9NNX6 404 aa6.53□□□□□ -1.36
LINC00342-201ENST00000412393 PARD6AQ9NPB6 346 aa6.53□□□□□ -1.36
LINC00342-201ENST00000412393 CASP8AP2Q9UKL3 1982 aa6.53□□□□□ -1.36
LINC00342-201ENST00000412393 ARAP2Q8WZ64 1704 aa6.53□□□□□ -1.36
LINC00342-201ENST00000412393 IRS2Q9Y4H2 1338 aa6.52□□□□□ -1.37
LINC00342-201ENST00000412393 PCNTO95613 3336 aa6.52□□□□□ -1.37
LINC00342-201ENST00000412393 FANCGO15287 622 aa6.52□□□□□ -1.37
LINC00342-201ENST00000412393 CTCFP49711 727 aaPredicted RBP6.52□□□□□ -1.37
LINC00342-201ENST00000412393 MMP14P50281 582 aa6.52□□□□□ -1.37
LINC00342-201ENST00000412393 HUNKP57058 714 aa6.52□□□□□ -1.37
LINC00342-201ENST00000412393 IRX6P78412 446 aaPredicted RBP6.52□□□□□ -1.37
LINC00342-201ENST00000412393 UBE4AQ14139 1066 aa6.52□□□□□ -1.37
LINC00342-201ENST00000412393 NBPF9Q3BBW0 867 aa6.52□□□□□ -1.37
LINC00342-201ENST00000412393 THAP5Q7Z6K1 395 aa6.52□□□□□ -1.37
LINC00342-201ENST00000412393 KIAA0825Q8IV33 1275 aa6.52□□□□□ -1.37
LINC00342-201ENST00000412393 ANKRD44Q8N8A2 993 aa6.52□□□□□ -1.37
LINC00342-201ENST00000412393 ABHD4Q8TB40 342 aa6.52□□□□□ -1.37
LINC00342-201ENST00000412393 CDCA5Q96FF9 252 aa6.52□□□□□ -1.37
LINC00342-201ENST00000412393 HHIPL1Q96JK4 782 aa6.52□□□□□ -1.37
LINC00342-201ENST00000412393 C20orf173Q96LM9 149 aa6.52□□□□□ -1.37
LINC00342-201ENST00000412393 ALPK1Q96QP1 1244 aa6.52□□□□□ -1.37
LINC00342-201ENST00000412393 PUS3Q9BZE2 481 aaKnown RBP6.52□□□□□ -1.37
LINC00342-201ENST00000412393 USP44Q9H0E7 712 aa6.52□□□□□ -1.37
LINC00342-201ENST00000412393 SEMA3GQ9NS98 782 aa6.52□□□□□ -1.37
LINC00342-201ENST00000412393 HDAC9Q9UKV0 1011 aa6.52□□□□□ -1.37
LINC00342-201ENST00000412393 BRPF3Q9ULD4 1205 aa6.52□□□□□ -1.37
LINC00342-201ENST00000412393 PAPPA2Q9BXP8 1791 aa6.52□□□□□ -1.37
LINC00342-201ENST00000412393 FAM155AB1AL88 458 aaPredicted RBP6.51□□□□□ -1.37
LINC00342-201ENST00000412393 ETV2O00321 342 aaPredicted RBP6.51□□□□□ -1.37
LINC00342-201ENST00000412393 WNT10BO00744 389 aa6.51□□□□□ -1.37
LINC00342-201ENST00000412393 SASH1O94885 1247 aa6.51□□□□□ -1.37
LINC00342-201ENST00000412393 EOMESO95936 686 aa6.51□□□□□ -1.37
LINC00342-201ENST00000412393 IL1R1P14778 569 aa6.51□□□□□ -1.37
LINC00342-201ENST00000412393 MAP2K2P36507 400 aa6.51□□□□□ -1.37
LINC00342-201ENST00000412393 LBX1P52954 281 aa6.51□□□□□ -1.37
LINC00342-201ENST00000412393 KRTAP5-3Q6L8H2 238 aa6.51□□□□□ -1.37
LINC00342-201ENST00000412393 KCNN1Q92952 543 aa6.51□□□□□ -1.37
LINC00342-201ENST00000412393 CITED4Q96RK1 184 aa6.51□□□□□ -1.37
LINC00342-201ENST00000412393 API5Q9BZZ5 524 aaKnown RBP6.51□□□□□ -1.37
LINC00342-201ENST00000412393 NOB1Q9ULX3 412 aaKnown RBP6.51□□□□□ -1.37
LINC00342-201ENST00000412393 RIPOR2Q9Y4F9 1068 aa6.51□□□□□ -1.37
LINC00342-201ENST00000412393 MROH5Q6ZUA9 1318 aa6.5□□□□□ -1.37
LINC00342-201ENST00000412393 F8W031 263 aaPredicted RBP6.5□□□□□ -1.37
LINC00342-201ENST00000412393 UBTFL1P0CB47 393 aaPredicted RBP6.5□□□□□ -1.37
LINC00342-201ENST00000412393 HSPA8P11142 646 aaKnown RBP6.5□□□□□ -1.37
LINC00342-201ENST00000412393 ARNTP27540 789 aa6.5□□□□□ -1.37
LINC00342-201ENST00000412393 HIBADHP31937 336 aaKnown RBP6.5□□□□□ -1.37
LINC00342-201ENST00000412393 GYG1P46976 350 aa6.5□□□□□ -1.37
LINC00342-201ENST00000412393 ZNF157P51786 506 aaPredicted RBP6.5□□□□□ -1.37
LINC00342-201ENST00000412393 RARSP54136 660 aaKnown RBP6.5□□□□□ -1.37
LINC00342-201ENST00000412393 RRP1P56182 461 aaKnown RBP6.5□□□□□ -1.37
LINC00342-201ENST00000412393 FKBP1AP62942 108 aaKnown RBP6.5□□□□□ -1.37
LINC00342-201ENST00000412393 NOGQ13253 232 aa6.5□□□□□ -1.37
LINC00342-201ENST00000412393 DLGAP5Q15398 846 aa6.5□□□□□ -1.37
LINC00342-201ENST00000412393 LRRC24Q50LG9 513 aa6.5□□□□□ -1.37
LINC00342-201ENST00000412393 METTL24Q5JXM2 366 aa6.5□□□□□ -1.37
LINC00342-201ENST00000412393 SCARA3Q6AZY7 606 aa6.5□□□□□ -1.37
LINC00342-201ENST00000412393 RGMBQ6NW40 437 aa6.5□□□□□ -1.37
LINC00342-201ENST00000412393 APOBEC3FQ8IUX4 373 aaKnown RBP6.5□□□□□ -1.37
LINC00342-201ENST00000412393 SULF2Q8IWU5 870 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms