RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 PPARGP37231 505 aaPredicted RBP9.05□□□□□ -0.96
SPTLC3-201ENST00000399002 EHHADHQ08426 723 aa9.05□□□□□ -0.96
SPTLC3-201ENST00000399002 MYO1EQ12965 1108 aa9.05□□□□□ -0.96
SPTLC3-201ENST00000399002 RBBP5Q15291 538 aaKnown RBP9.05□□□□□ -0.96
SPTLC3-201ENST00000399002 LRRC24Q50LG9 513 aa9.05□□□□□ -0.96
SPTLC3-201ENST00000399002 NME8Q8N427 588 aa9.05□□□□□ -0.96
SPTLC3-201ENST00000399002 MB21D1Q8N884 522 aa9.05□□□□□ -0.96
SPTLC3-201ENST00000399002 NEK9Q8TD19 979 aa9.05□□□□□ -0.96
SPTLC3-201ENST00000399002 SDR42E1Q8WUS8 393 aa9.05□□□□□ -0.96
SPTLC3-201ENST00000399002 TCP11Q8WWU5 503 aa9.05□□□□□ -0.96
SPTLC3-201ENST00000399002 ORAI2Q96SN7 254 aa9.05□□□□□ -0.96
SPTLC3-201ENST00000399002 GCOM2Q9BZD3 368 aaPredicted RBP9.05□□□□□ -0.96
SPTLC3-201ENST00000399002 SNX25Q9H3E2 840 aa9.05□□□□□ -0.96
SPTLC3-201ENST00000399002 CEP72Q9P209 647 aa9.05□□□□□ -0.96
SPTLC3-201ENST00000399002 SEPT9Q9UHD8 586 aaPredicted RBP9.05□□□□□ -0.96
SPTLC3-201ENST00000399002 IFNB1P01574 187 aa9.05□□□□□ -0.96
SPTLC3-201ENST00000399002 MYBL1P10243 752 aa9.05□□□□□ -0.96
SPTLC3-201ENST00000399002 ARL4AP40617 200 aa9.05□□□□□ -0.96
SPTLC3-201ENST00000399002 GYG1P46976 350 aa9.05□□□□□ -0.96
SPTLC3-201ENST00000399002 PSMD6Q15008 389 aa9.05□□□□□ -0.96
SPTLC3-201ENST00000399002 CC2D2BQ6DHV5 1058 aa9.05□□□□□ -0.96
SPTLC3-201ENST00000399002 SMCR8Q8TEV9 937 aaPredicted RBP9.05□□□□□ -0.96
SPTLC3-201ENST00000399002 STAMQ92783 540 aa9.05□□□□□ -0.96
SPTLC3-201ENST00000399002 SLAIN2Q9P270 581 aa9.05□□□□□ -0.96
SPTLC3-201ENST00000399002 SYNGAP1Q96PV0 1343 aa9.04□□□□□ -0.96
SPTLC3-201ENST00000399002 SERPINB6P35237 376 aa9.04□□□□□ -0.96
SPTLC3-201ENST00000399002 RDH13Q8NBN7 331 aa9.04□□□□□ -0.96
SPTLC3-201ENST00000399002 DCPSQ96C86 337 aaKnown RBP9.04□□□□□ -0.96
SPTLC3-201ENST00000399002 KIFC3Q9BVG8 833 aa9.04□□□□□ -0.96
SPTLC3-201ENST00000399002 DBNLQ9UJU6 430 aaKnown RBP9.04□□□□□ -0.96
SPTLC3-201ENST00000399002 PYCARDQ9ULZ3 195 aa9.04□□□□□ -0.96
SPTLC3-201ENST00000399002 PCDHA5Q9Y5H7 936 aa9.04□□□□□ -0.96
SPTLC3-201ENST00000399002 MAP3K7O43318 606 aa9.04□□□□□ -0.96
SPTLC3-201ENST00000399002 GGPS1O95749 300 aa9.04□□□□□ -0.96
SPTLC3-201ENST00000399002 RPS6KC1Q96S38 1066 aa9.04□□□□□ -0.96
SPTLC3-201ENST00000399002 CDC42BPAQ5VT25 1732 aa9.04□□□□□ -0.96
SPTLC3-201ENST00000399002 DR1Q01658 176 aa9.04□□□□□ -0.96
SPTLC3-201ENST00000399002 DNAJC24Q6P3W2 148 aa9.04□□□□□ -0.96
SPTLC3-201ENST00000399002 GREM2Q9H772 168 aa9.04□□□□□ -0.96
SPTLC3-201ENST00000399002 PARVGQ9HBI0 331 aa9.04□□□□□ -0.96
SPTLC3-201ENST00000399002 GCNT4Q9P109 453 aa9.04□□□□□ -0.96
SPTLC3-201ENST00000399002 RRP15Q9Y3B9 282 aaKnown RBP9.04□□□□□ -0.96
SPTLC3-201ENST00000399002 PYGBP11216 843 aa9.04□□□□□ -0.96
SPTLC3-201ENST00000399002 NFKBIAP25963 317 aa9.04□□□□□ -0.96
SPTLC3-201ENST00000399002 IGBP1P78318 339 aa9.04□□□□□ -0.96
SPTLC3-201ENST00000399002 ITKQ08881 620 aa9.04□□□□□ -0.96
SPTLC3-201ENST00000399002 PODNQ7Z5L7 613 aa9.04□□□□□ -0.96
SPTLC3-201ENST00000399002 TTC39CQ8N584 583 aa9.04□□□□□ -0.96
SPTLC3-201ENST00000399002 TTC13Q8NBP0 860 aa9.04□□□□□ -0.96
SPTLC3-201ENST00000399002 SLC7A3Q8WY07 619 aa9.04□□□□□ -0.96
SPTLC3-201ENST00000399002 HDAC11Q96DB2 347 aa9.04□□□□□ -0.96
SPTLC3-201ENST00000399002 ABCC3O15438 1527 aa9.04□□□□□ -0.96
SPTLC3-201ENST00000399002 GPC4O75487 556 aa9.04□□□□□ -0.96
SPTLC3-201ENST00000399002 NDUFA10O95299 355 aa9.04□□□□□ -0.96
SPTLC3-201ENST00000399002 DLATP10515 647 aaKnown RBP9.04□□□□□ -0.96
SPTLC3-201ENST00000399002 ATP1A2P50993 1020 aa9.04□□□□□ -0.96
SPTLC3-201ENST00000399002 IRX5P78411 483 aaPredicted RBP9.04□□□□□ -0.96
SPTLC3-201ENST00000399002 TNFAIP2Q03169 654 aa9.04□□□□□ -0.96
SPTLC3-201ENST00000399002 C11orf57Q6ZUT1 292 aaPredicted RBP9.04□□□□□ -0.96
SPTLC3-201ENST00000399002 CENPUQ71F23 418 aa9.04□□□□□ -0.96
SPTLC3-201ENST00000399002 LRRIQ4A6NIV6 560 aa9.03□□□□□ -0.96
SPTLC3-201ENST00000399002 HNRNPDLO14979 420 aaKnown RBP9.03□□□□□ -0.96
SPTLC3-201ENST00000399002 MFAP3LO75121 409 aa9.03□□□□□ -0.96
SPTLC3-201ENST00000399002 BAG2O95816 211 aa9.03□□□□□ -0.96
SPTLC3-201ENST00000399002 PAMP19021 973 aa9.03□□□□□ -0.96
SPTLC3-201ENST00000399002 CRKLP46109 303 aaKnown RBP9.03□□□□□ -0.96
SPTLC3-201ENST00000399002 BAG6P46379 1132 aa9.03□□□□□ -0.96
SPTLC3-201ENST00000399002 STAT2P52630 851 aa9.03□□□□□ -0.96
SPTLC3-201ENST00000399002 THOC5Q13769 683 aaKnown RBP9.03□□□□□ -0.96
SPTLC3-201ENST00000399002 MESDQ14696 234 aa9.03□□□□□ -0.96
SPTLC3-201ENST00000399002 EPB41L5Q9HCM4 733 aa9.03□□□□□ -0.96
SPTLC3-201ENST00000399002 hCG_1642624A0A1W2PR95 340 aa9.03□□□□□ -0.96
SPTLC3-201ENST00000399002 ESRRGP62508 458 aa9.03□□□□□ -0.96
SPTLC3-201ENST00000399002 PDE1BQ01064 536 aa9.03□□□□□ -0.96
SPTLC3-201ENST00000399002 FAM98CQ17RN3 349 aaKnown RBP9.03□□□□□ -0.96
SPTLC3-201ENST00000399002 TTBK2Q6IQ55 1244 aa9.03□□□□□ -0.96
SPTLC3-201ENST00000399002 RBM41Q96IZ5 413 aaKnown RBP9.03□□□□□ -0.96
SPTLC3-201ENST00000399002 ZMYND12Q9H0C1 365 aa9.03□□□□□ -0.96
SPTLC3-201ENST00000399002 NDUFB9Q9Y6M9 179 aa9.03□□□□□ -0.96
SPTLC3-201ENST00000399002 PXDNLA1KZ92 1463 aa9.03□□□□□ -0.96
SPTLC3-201ENST00000399002 QRICH2Q9H0J4 1663 aa9.03□□□□□ -0.96
SPTLC3-201ENST00000399002 RNF17Q9BXT8 1623 aaKnown RBP9.03□□□□□ -0.96
SPTLC3-201ENST00000399002 MAPK13O15264 365 aa9.03□□□□□ -0.96
SPTLC3-201ENST00000399002 MT-ND3P03897 115 aa9.03□□□□□ -0.96
SPTLC3-201ENST00000399002 CYP21A2P08686 494 aa9.03□□□□□ -0.96
SPTLC3-201ENST00000399002 GCKP35557 465 aa9.03□□□□□ -0.96
SPTLC3-201ENST00000399002 KCTD2Q14681 263 aa9.03□□□□□ -0.96
SPTLC3-201ENST00000399002 ARHGEF25Q86VW2 580 aa9.03□□□□□ -0.96
SPTLC3-201ENST00000399002 SLC38A10Q9HBR0 1119 aa9.03□□□□□ -0.96
SPTLC3-201ENST00000399002 ARHGEF40Q8TER5 1519 aa9.03□□□□□ -0.96
SPTLC3-201ENST00000399002 GLI2P10070 1586 aa9.03□□□□□ -0.96
SPTLC3-201ENST00000399002 PHKA1P46020 1223 aa9.03□□□□□ -0.96
SPTLC3-201ENST00000399002 KYAT1Q16773 422 aa9.03□□□□□ -0.96
SPTLC3-201ENST00000399002 ARL13BQ3SXY8 428 aa9.03□□□□□ -0.96
SPTLC3-201ENST00000399002 SPOUT1Q5T280 376 aaKnown RBP9.03□□□□□ -0.96
SPTLC3-201ENST00000399002 TEDDM1Q5T9Z0 273 aa9.03□□□□□ -0.96
SPTLC3-201ENST00000399002 KLC3Q6P597 504 aa9.03□□□□□ -0.96
SPTLC3-201ENST00000399002 EP400NLQ6ZTU2 488 aa9.03□□□□□ -0.96
SPTLC3-201ENST00000399002 UNC13DQ70J99 1090 aa9.03□□□□□ -0.96
SPTLC3-201ENST00000399002 TBCKQ8TEA7 893 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms