RNA–Protein interactions for RNA: ENST00000398146.3

RGPD2-201, Transcript of RANBP2-like and GRIP domain containing 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD2, Length 6,931 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD2-201ENST00000398146 SELENONQ9NZV5 590 aa12.18□□□□□ -0.46
RGPD2-201ENST00000398146 MCF2LO15068 1137 aa12.17□□□□□ -0.46
RGPD2-201ENST00000398146 ARHGAP6O43182 974 aa12.17□□□□□ -0.46
RGPD2-201ENST00000398146 SMAD1Q15797 465 aaKnown RBP12.17□□□□□ -0.46
RGPD2-201ENST00000398146 KRT71Q3SY84 523 aa12.17□□□□□ -0.46
RGPD2-201ENST00000398146 LRRC31Q6UY01 552 aa12.17□□□□□ -0.46
RGPD2-201ENST00000398146 HDXQ7Z353 690 aa12.17□□□□□ -0.46
RGPD2-201ENST00000398146 KRT222Q8N1A0 295 aa12.17□□□□□ -0.46
RGPD2-201ENST00000398146 TRIML1Q8N9V2 468 aa12.17□□□□□ -0.46
RGPD2-201ENST00000398146 MAP3K19Q56UN5 1328 aa12.17□□□□□ -0.46
RGPD2-201ENST00000398146 C2CD2LO14523 706 aa12.17□□□□□ -0.46
RGPD2-201ENST00000398146 CUTAO60888 179 aa12.17□□□□□ -0.46
RGPD2-201ENST00000398146 HSPD1P10809 573 aaKnown RBP12.17□□□□□ -0.46
RGPD2-201ENST00000398146 SSTR3P32745 418 aaPredicted RBP12.17□□□□□ -0.46
RGPD2-201ENST00000398146 STXBP2Q15833 593 aa12.17□□□□□ -0.46
RGPD2-201ENST00000398146 CFAP221Q4G0U5 840 aa12.17□□□□□ -0.46
RGPD2-201ENST00000398146 KRT40Q6A162 431 aa12.17□□□□□ -0.46
RGPD2-201ENST00000398146 RAB17Q9H0T7 212 aa12.17□□□□□ -0.46
RGPD2-201ENST00000398146 ACCSQ96QU6 501 aa12.17□□□□□ -0.46
RGPD2-201ENST00000398146 ZNF212Q9UDV6 495 aa12.17□□□□□ -0.46
RGPD2-201ENST00000398146 ARIH2O95376 493 aa12.17□□□□□ -0.46
RGPD2-201ENST00000398146 HMBSP08397 361 aa12.17□□□□□ -0.46
RGPD2-201ENST00000398146 TRIM45Q9H8W5 580 aaPredicted RBP12.17□□□□□ -0.46
RGPD2-201ENST00000398146 TOM1L1O75674 476 aa12.17□□□□□ -0.46
RGPD2-201ENST00000398146 CHEK2O96017 543 aa12.17□□□□□ -0.46
RGPD2-201ENST00000398146 COPB2P35606 906 aa12.17□□□□□ -0.46
RGPD2-201ENST00000398146 NME3Q13232 169 aa12.17□□□□□ -0.46
RGPD2-201ENST00000398146 PDCD2Q16342 344 aaPredicted RBP12.17□□□□□ -0.46
RGPD2-201ENST00000398146 TSNAXIP1Q2TAA8 658 aa12.17□□□□□ -0.46
RGPD2-201ENST00000398146 ZNF394Q53GI3 561 aa12.17□□□□□ -0.46
RGPD2-201ENST00000398146 MEI1Q5TIA1 1274 aa12.17□□□□□ -0.46
RGPD2-201ENST00000398146 EEF2KMTQ96G04 330 aa12.17□□□□□ -0.46
RGPD2-201ENST00000398146 OR52Z1P0C646 297 aa12.16□□□□□ -0.46
RGPD2-201ENST00000398146 GRIK1P39086 918 aa12.16□□□□□ -0.46
RGPD2-201ENST00000398146 LIG3P49916 1009 aa12.16□□□□□ -0.46
RGPD2-201ENST00000398146 CLNS1AP54105 237 aaKnown RBP12.16□□□□□ -0.46
RGPD2-201ENST00000398146 C11orf96Q7Z7L8 435 aa12.16□□□□□ -0.46
RGPD2-201ENST00000398146 CCDC124Q96CT7 223 aaKnown RBP12.16□□□□□ -0.46
RGPD2-201ENST00000398146 SERTAD1Q9UHV2 236 aa12.16□□□□□ -0.46
RGPD2-201ENST00000398146 SART1O43290 800 aaKnown RBP12.16□□□□□ -0.46
RGPD2-201ENST00000398146 HUS1O60921 280 aa12.16□□□□□ -0.46
RGPD2-201ENST00000398146 CCDC38Q502W7 563 aa12.16□□□□□ -0.46
RGPD2-201ENST00000398146 RNF10Q8N5U6 811 aaKnown RBP12.16□□□□□ -0.46
RGPD2-201ENST00000398146 CFAP61Q8NHU2 1237 aa12.16□□□□□ -0.46
RGPD2-201ENST00000398146 MAPK4P31152 587 aa12.16□□□□□ -0.46
RGPD2-201ENST00000398146 RHPN2Q8IUC4 686 aa12.16□□□□□ -0.46
RGPD2-201ENST00000398146 SLC26A7Q8TE54 656 aa12.16□□□□□ -0.46
RGPD2-201ENST00000398146 CCDC138Q96M89 665 aa12.16□□□□□ -0.46
RGPD2-201ENST00000398146 SP110Q9HB58 689 aa12.16□□□□□ -0.46
RGPD2-201ENST00000398146 SCAF11Q99590 1463 aaKnown RBP12.16□□□□□ -0.46
RGPD2-201ENST00000398146 ZNF263O14978 683 aa12.16□□□□□ -0.46
RGPD2-201ENST00000398146 MECOMQ03112 1051 aa12.16□□□□□ -0.46
RGPD2-201ENST00000398146 RBBP7Q16576 425 aa12.16□□□□□ -0.46
RGPD2-201ENST00000398146 SYTL3Q4VX76 610 aa12.16□□□□□ -0.46
RGPD2-201ENST00000398146 TRIM48Q8IWZ4 208 aa12.16□□□□□ -0.46
RGPD2-201ENST00000398146 ULK4Q96C45 1275 aa12.16□□□□□ -0.46
RGPD2-201ENST00000398146 CEP19Q96LK0 163 aa12.16□□□□□ -0.46
RGPD2-201ENST00000398146 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.16□□□□□ -0.46
RGPD2-201ENST00000398146 ZFYVE28Q9HCC9 887 aa12.16□□□□□ -0.46
RGPD2-201ENST00000398146 KDM5BQ9UGL1 1544 aa12.16□□□□□ -0.46
RGPD2-201ENST00000398146 OCRLQ01968 901 aa12.16□□□□□ -0.46
RGPD2-201ENST00000398146 DNAJC24Q6P3W2 148 aa12.16□□□□□ -0.46
RGPD2-201ENST00000398146 PCGF5Q86SE9 256 aa12.16□□□□□ -0.46
RGPD2-201ENST00000398146 CDHR1Q96JP9 859 aa12.16□□□□□ -0.46
RGPD2-201ENST00000398146 CYP2B6P20813 491 aa12.16□□□□□ -0.46
RGPD2-201ENST00000398146 HIF1AQ16665 826 aa12.16□□□□□ -0.46
RGPD2-201ENST00000398146 TRIM68Q6AZZ1 485 aa12.16□□□□□ -0.46
RGPD2-201ENST00000398146 MCTP2Q6DN12 878 aa12.16□□□□□ -0.46
RGPD2-201ENST00000398146 ZNF496Q96IT1 587 aaPredicted RBP12.16□□□□□ -0.46
RGPD2-201ENST00000398146 ENTPD7Q9NQZ7 604 aa12.16□□□□□ -0.46
RGPD2-201ENST00000398146 BABAM1Q9NWV8 329 aa12.16□□□□□ -0.46
RGPD2-201ENST00000398146 TADA2AO75478 443 aa12.15□□□□□ -0.46
RGPD2-201ENST00000398146 MAP3K21Q5TCX8 1036 aa12.15□□□□□ -0.46
RGPD2-201ENST00000398146 KLC3Q6P597 504 aa12.15□□□□□ -0.46
RGPD2-201ENST00000398146 AFF2P51816 1311 aa12.15□□□□□ -0.46
RGPD2-201ENST00000398146 NDUFAB1O14561 156 aa12.15□□□□□ -0.46
RGPD2-201ENST00000398146 KDELC2Q7Z4H8 507 aa12.15□□□□□ -0.46
RGPD2-201ENST00000398146 IFNL3Q8IZI9 196 aa12.15□□□□□ -0.46
RGPD2-201ENST00000398146 TEX12Q9BXU0 123 aa12.15□□□□□ -0.46
RGPD2-201ENST00000398146 SOS1Q07889 1333 aaPredicted RBP12.15□□□□□ -0.46
RGPD2-201ENST00000398146 EEF1B2P24534 225 aaKnown RBP12.15□□□□□ -0.46
RGPD2-201ENST00000398146 EVCP57679 992 aa12.15□□□□□ -0.46
RGPD2-201ENST00000398146 DYNLL1P63167 89 aaKnown RBP12.15□□□□□ -0.46
RGPD2-201ENST00000398146 PPP6R3Q5H9R7 873 aaPredicted RBP12.15□□□□□ -0.46
RGPD2-201ENST00000398146 ALKBH2Q6NS38 261 aa12.15□□□□□ -0.46
RGPD2-201ENST00000398146 SYNE4Q8N205 404 aa12.15□□□□□ -0.46
RGPD2-201ENST00000398146 ZFP42Q96MM3 310 aa12.15□□□□□ -0.46
RGPD2-201ENST00000398146 FCER1AP12319 257 aa12.15□□□□□ -0.46
RGPD2-201ENST00000398146 EPB42P16452 691 aa12.15□□□□□ -0.46
RGPD2-201ENST00000398146 MUM1Q2TAK8 710 aa12.15□□□□□ -0.46
RGPD2-201ENST00000398146 IRAK1BP1Q5VVH5 260 aa12.15□□□□□ -0.46
RGPD2-201ENST00000398146 SNRNP48Q6IEG0 339 aaKnown RBP12.15□□□□□ -0.46
RGPD2-201ENST00000398146 OR6J1Q8NGC5 347 aa12.15□□□□□ -0.46
RGPD2-201ENST00000398146 BPIFB4P59827 614 aa12.15□□□□□ -0.47
RGPD2-201ENST00000398146 CUL1Q13616 776 aa12.15□□□□□ -0.47
RGPD2-201ENST00000398146 NOLC1Q14978 699 aaKnown RBP eCLIP12.15□□□□□ -0.47
RGPD2-201ENST00000398146 SLMAPQ14BN4 828 aa12.15□□□□□ -0.47
RGPD2-201ENST00000398146 DNAJC5BQ9UF47 199 aa12.15□□□□□ -0.47
RGPD2-201ENST00000398146 UBA6A0AVT1 1052 aaPredicted RBP12.14□□□□□ -0.47
RGPD2-201ENST00000398146 MYO1FO00160 1098 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms