RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 NCK2O43639 380 aa7.76□□□□□ -1.17
SMCO1-201ENST00000397537 TLL1O43897 1013 aa7.76□□□□□ -1.17
SMCO1-201ENST00000397537 H2AFYO75367 372 aaKnown RBP7.76□□□□□ -1.17
SMCO1-201ENST00000397537 TPM2P07951 284 aa7.76□□□□□ -1.17
SMCO1-201ENST00000397537 VEGFAP15692 232 aaPredicted RBP7.76□□□□□ -1.17
SMCO1-201ENST00000397537 STAT1P42224 750 aa7.76□□□□□ -1.17
SMCO1-201ENST00000397537 MAN2A2P49641 1150 aa7.76□□□□□ -1.17
SMCO1-201ENST00000397537 ZNF157P51786 506 aaPredicted RBP7.76□□□□□ -1.17
SMCO1-201ENST00000397537 LRRC32Q14392 662 aa7.76□□□□□ -1.17
SMCO1-201ENST00000397537 SMC1AQ14683 1233 aaKnown RBP7.76□□□□□ -1.17
SMCO1-201ENST00000397537 PTPN14Q15678 1187 aa7.76□□□□□ -1.17
SMCO1-201ENST00000397537 SLC27A3Q5K4L6 730 aa7.76□□□□□ -1.17
SMCO1-201ENST00000397537 ANKRD45Q5TZF3 282 aa7.76□□□□□ -1.17
SMCO1-201ENST00000397537 FAM205BPQ63HN1 556 aa7.76□□□□□ -1.17
SMCO1-201ENST00000397537 WAPLQ7Z5K2 1190 aa7.76□□□□□ -1.17
SMCO1-201ENST00000397537 NLRP13Q86W25 1043 aa7.76□□□□□ -1.17
SMCO1-201ENST00000397537 HEATR4Q86WZ0 1026 aa7.76□□□□□ -1.17
SMCO1-201ENST00000397537 ZNF227Q86WZ6 799 aa7.76□□□□□ -1.17
SMCO1-201ENST00000397537 KIF18BQ86Y91 864 aa7.76□□□□□ -1.17
SMCO1-201ENST00000397537 OR8H1Q8NGG4 311 aa7.76□□□□□ -1.17
SMCO1-201ENST00000397537 GRIN3AQ8TCU5 1115 aa7.76□□□□□ -1.17
SMCO1-201ENST00000397537 ASB12Q8WXK4 309 aa7.76□□□□□ -1.17
SMCO1-201ENST00000397537 NT5C1BQ96P26 610 aa7.76□□□□□ -1.17
SMCO1-201ENST00000397537 ASB2Q96Q27 587 aa7.76□□□□□ -1.17
SMCO1-201ENST00000397537 GTPBP4Q9BZE4 634 aaKnown RBP7.76□□□□□ -1.17
SMCO1-201ENST00000397537 CERS4Q9HA82 394 aa7.76□□□□□ -1.17
SMCO1-201ENST00000397537 XPO7Q9UIA9 1087 aaKnown RBP7.76□□□□□ -1.17
SMCO1-201ENST00000397537 CYP8B1Q9UNU6 501 aa7.76□□□□□ -1.17
SMCO1-201ENST00000397537 INVSQ9Y283 1065 aa7.76□□□□□ -1.17
SMCO1-201ENST00000397537 SUPT6HQ7KZ85 1726 aaKnown RBP7.76□□□□□ -1.17
SMCO1-201ENST00000397537 SETBP1Q9Y6X0 1596 aa7.76□□□□□ -1.17
SMCO1-201ENST00000397537 ZNF142P52746 1687 aaPredicted RBP7.76□□□□□ -1.17
SMCO1-201ENST00000397537 DNAJA2O60884 412 aa7.75□□□□□ -1.17
SMCO1-201ENST00000397537 AKR1B1P15121 316 aa7.75□□□□□ -1.17
SMCO1-201ENST00000397537 KCNA6P17658 529 aa7.75□□□□□ -1.17
SMCO1-201ENST00000397537 MUTP22033 750 aa7.75□□□□□ -1.17
SMCO1-201ENST00000397537 CLN3Q13286 438 aa7.75□□□□□ -1.17
SMCO1-201ENST00000397537 BLMHQ13867 455 aa7.75□□□□□ -1.17
SMCO1-201ENST00000397537 E2F5Q15329 346 aa7.75□□□□□ -1.17
SMCO1-201ENST00000397537 FKBP15Q5T1M5 1219 aa7.75□□□□□ -1.17
SMCO1-201ENST00000397537 LILRA6Q6PI73 481 aa7.75□□□□□ -1.17
SMCO1-201ENST00000397537 DPP9Q86TI2 863 aa7.75□□□□□ -1.17
SMCO1-201ENST00000397537 COLGALT2Q8IYK4 626 aa7.75□□□□□ -1.17
SMCO1-201ENST00000397537 HPS3Q969F9 1004 aa7.75□□□□□ -1.17
SMCO1-201ENST00000397537 FERMT2Q96AC1 680 aa7.75□□□□□ -1.17
SMCO1-201ENST00000397537 IWS1Q96ST2 819 aa7.75□□□□□ -1.17
SMCO1-201ENST00000397537 CARD10Q9BWT7 1032 aa7.75□□□□□ -1.17
SMCO1-201ENST00000397537 DMRT3Q9NQL9 472 aa7.75□□□□□ -1.17
SMCO1-201ENST00000397537 LRP2BPQ9P2M1 347 aa7.75□□□□□ -1.17
SMCO1-201ENST00000397537 SEL1LQ9UBV2 794 aa7.75□□□□□ -1.17
SMCO1-201ENST00000397537 TBK1Q9UHD2 729 aa7.75□□□□□ -1.17
SMCO1-201ENST00000397537 VWDEQ8N2E2 1590 aa7.75□□□□□ -1.17
SMCO1-201ENST00000397537 PRR36Q9H6K5 1346 aa7.75□□□□□ -1.17
SMCO1-201ENST00000397537 SCAPERQ9BY12 1400 aa7.75□□□□□ -1.17
SMCO1-201ENST00000397537 CNTLNQ9NXG0 1405 aa7.75□□□□□ -1.17
SMCO1-201ENST00000397537 LRRC7Q96NW7 1537 aa7.75□□□□□ -1.17
SMCO1-201ENST00000397537 GOLGA3Q08378 1498 aa7.75□□□□□ -1.17
SMCO1-201ENST00000397537 KLHL33A6NCF5 533 aa7.75□□□□□ -1.17
SMCO1-201ENST00000397537 GOLGA8CPA6NN73 597 aa7.75□□□□□ -1.17
SMCO1-201ENST00000397537 ULK1O75385 1050 aa7.75□□□□□ -1.17
SMCO1-201ENST00000397537 TRPA1O75762 1119 aa7.75□□□□□ -1.17
SMCO1-201ENST00000397537 POLBP06746 335 aa7.75□□□□□ -1.17
SMCO1-201ENST00000397537 GRM5P41594 1212 aa7.75□□□□□ -1.17
SMCO1-201ENST00000397537 LSSP48449 732 aa7.75□□□□□ -1.17
SMCO1-201ENST00000397537 TUBP50607 506 aa7.75□□□□□ -1.17
SMCO1-201ENST00000397537 ATXN1P54253 815 aaKnown RBP7.75□□□□□ -1.17
SMCO1-201ENST00000397537 DCAF7P61962 342 aa7.75□□□□□ -1.17
SMCO1-201ENST00000397537 RGL3Q3MIN7 710 aa7.75□□□□□ -1.17
SMCO1-201ENST00000397537 MFSD4BQ5TF39 518 aa7.75□□□□□ -1.17
SMCO1-201ENST00000397537 KRT78Q8N1N4 520 aa7.75□□□□□ -1.17
SMCO1-201ENST00000397537 KDF1Q8NAX2 398 aaPredicted RBP7.75□□□□□ -1.17
SMCO1-201ENST00000397537 LRRN4CLQ8ND94 238 aa7.75□□□□□ -1.17
SMCO1-201ENST00000397537 STK35Q8TDR2 534 aa7.75□□□□□ -1.17
SMCO1-201ENST00000397537 RADILQ96JH8 1075 aa7.75□□□□□ -1.17
SMCO1-201ENST00000397537 MAGEB10Q96LZ2 347 aaPredicted RBP7.75□□□□□ -1.17
SMCO1-201ENST00000397537 ZNF830Q96NB3 372 aaPredicted RBP7.75□□□□□ -1.17
SMCO1-201ENST00000397537 STK31Q9BXU1 1019 aa7.75□□□□□ -1.17
SMCO1-201ENST00000397537 TSPY26PQ9H489 355 aa7.75□□□□□ -1.17
SMCO1-201ENST00000397537 SAMD15Q9P1V8 674 aa7.75□□□□□ -1.17
SMCO1-201ENST00000397537 AGLP35573 1532 aa7.75□□□□□ -1.17
SMCO1-201ENST00000397537 FAM227AF5H4B4 570 aa7.74□□□□□ -1.17
SMCO1-201ENST00000397537 CBX4O00257 560 aa7.74□□□□□ -1.17
SMCO1-201ENST00000397537 TNFRSF10CO14798 259 aa7.74□□□□□ -1.17
SMCO1-201ENST00000397537 TUSC2O75896 110 aa7.74□□□□□ -1.17
SMCO1-201ENST00000397537 GLRX3O76003 335 aaKnown RBP7.74□□□□□ -1.17
SMCO1-201ENST00000397537 EGFRP00533 1210 aa7.74□□□□□ -1.17
SMCO1-201ENST00000397537 ZBTB48P10074 688 aaPredicted RBP7.74□□□□□ -1.17
SMCO1-201ENST00000397537 ATF7P17544 494 aaPredicted RBP7.74□□□□□ -1.17
SMCO1-201ENST00000397537 CNTFP26441 200 aa7.74□□□□□ -1.17
SMCO1-201ENST00000397537 CDK8P49336 464 aa7.74□□□□□ -1.17
SMCO1-201ENST00000397537 MRE11P49959 708 aa7.74□□□□□ -1.17
SMCO1-201ENST00000397537 ZNF143P52747 638 aaPredicted RBP7.74□□□□□ -1.17
SMCO1-201ENST00000397537 ICA1Q05084 483 aa7.74□□□□□ -1.17
SMCO1-201ENST00000397537 PSMD6Q15008 389 aa7.74□□□□□ -1.17
SMCO1-201ENST00000397537 PPP1R26Q5T8A7 1209 aaPredicted RBP7.74□□□□□ -1.17
SMCO1-201ENST00000397537 UNC5DQ6UXZ4 953 aa7.74□□□□□ -1.17
SMCO1-201ENST00000397537 MCM10Q7L590 875 aa7.74□□□□□ -1.17
SMCO1-201ENST00000397537 NLRC3Q7RTR2 1065 aa7.74□□□□□ -1.17
SMCO1-201ENST00000397537 NCAPG2Q86XI2 1143 aa7.74□□□□□ -1.17
SMCO1-201ENST00000397537 GALNT13Q8IUC8 556 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms