RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 TBC1D23Q9NUY8 699 aa11.11□□□□□ -0.63
COL4A4-201ENST00000396625 PHF8Q9UPP1 1060 aa11.11□□□□□ -0.63
COL4A4-201ENST00000396625 POLGP54098 1239 aaPredicted RBP11.11□□□□□ -0.63
COL4A4-201ENST00000396625 DZIP3Q86Y13 1208 aaKnown RBP11.11□□□□□ -0.63
COL4A4-201ENST00000396625 CPXCR1Q8N123 301 aa11.11□□□□□ -0.63
COL4A4-201ENST00000396625 ALKBH8Q96BT7 664 aaKnown RBP11.11□□□□□ -0.63
COL4A4-201ENST00000396625 LMBRD1Q9NUN5 540 aa11.11□□□□□ -0.63
COL4A4-201ENST00000396625 RTEL1Q9NZ71 1219 aa11.11□□□□□ -0.63
COL4A4-201ENST00000396625 LMCD1Q9NZU5 365 aa11.11□□□□□ -0.63
COL4A4-201ENST00000396625 TOPBP1Q92547 1522 aa11.11□□□□□ -0.63
COL4A4-201ENST00000396625 H7C1D1 291 aa11.11□□□□□ -0.63
COL4A4-201ENST00000396625 ACSBG1Q96GR2 724 aa11.11□□□□□ -0.63
COL4A4-201ENST00000396625 FOXO3O43524 673 aa11.11□□□□□ -0.63
COL4A4-201ENST00000396625 SORBS3O60504 671 aa11.11□□□□□ -0.63
COL4A4-201ENST00000396625 UFL1O94874 794 aa11.11□□□□□ -0.63
COL4A4-201ENST00000396625 SPARCL1Q14515 664 aa11.11□□□□□ -0.63
COL4A4-201ENST00000396625 TPTE2Q6XPS3 522 aa11.11□□□□□ -0.63
COL4A4-201ENST00000396625 NEK9Q8TD19 979 aa11.11□□□□□ -0.63
COL4A4-201ENST00000396625 ADNPQ9H2P0 1102 aa11.11□□□□□ -0.63
COL4A4-201ENST00000396625 DCTPP1Q9H773 170 aa11.11□□□□□ -0.63
COL4A4-201ENST00000396625 ADA2Q9NZK5 511 aa11.11□□□□□ -0.63
COL4A4-201ENST00000396625 STOML1Q9UBI4 398 aa11.11□□□□□ -0.63
COL4A4-201ENST00000396625 PRG3Q9Y2Y8 225 aaPredicted RBP11.11□□□□□ -0.63
COL4A4-201ENST00000396625 RNF103-CHMP3A0A140T963 221 aa11.11□□□□□ -0.63
COL4A4-201ENST00000396625 H2AFZP0C0S5 128 aa11.11□□□□□ -0.63
COL4A4-201ENST00000396625 IMPDH2P12268 514 aa11.11□□□□□ -0.63
COL4A4-201ENST00000396625 PAMP19021 973 aa11.11□□□□□ -0.63
COL4A4-201ENST00000396625 NSUN2Q08J23 767 aaKnown RBP eCLIP11.11□□□□□ -0.63
COL4A4-201ENST00000396625 H2AFVQ71UI9 128 aa11.11□□□□□ -0.63
COL4A4-201ENST00000396625 ANO5Q75V66 913 aa11.11□□□□□ -0.63
COL4A4-201ENST00000396625 TECP42680 631 aa11.11□□□□□ -0.63
COL4A4-201ENST00000396625 PTK2BQ14289 1009 aa11.11□□□□□ -0.63
COL4A4-201ENST00000396625 AARS2Q5JTZ9 985 aaKnown RBP11.11□□□□□ -0.63
COL4A4-201ENST00000396625 ARMC2Q8NEN0 867 aa11.11□□□□□ -0.63
COL4A4-201ENST00000396625 PPIP5K1Q6PFW1 1433 aa11.1□□□□□ -0.63
COL4A4-201ENST00000396625 CA4P22748 312 aa11.1□□□□□ -0.63
COL4A4-201ENST00000396625 PTK2Q05397 1052 aa11.1□□□□□ -0.63
COL4A4-201ENST00000396625 BEND6Q5SZJ8 279 aaPredicted RBP11.1□□□□□ -0.63
COL4A4-201ENST00000396625 SLC35F6Q8N357 371 aa11.1□□□□□ -0.63
COL4A4-201ENST00000396625 TTC30BQ8N4P2 665 aa11.1□□□□□ -0.63
COL4A4-201ENST00000396625 NUP160Q12769 1436 aa11.1□□□□□ -0.63
COL4A4-201ENST00000396625 ESRRBO95718 433 aa11.1□□□□□ -0.63
COL4A4-201ENST00000396625 AFPP02771 609 aaKnown RBP11.1□□□□□ -0.63
COL4A4-201ENST00000396625 KITP10721 976 aa11.1□□□□□ -0.63
COL4A4-201ENST00000396625 INPP5FQ9Y2H2 1132 aa11.1□□□□□ -0.63
COL4A4-201ENST00000396625 MAST3O60307 1309 aa11.1□□□□□ -0.63
COL4A4-201ENST00000396625 TLR3O15455 904 aaKnown RBP11.1□□□□□ -0.63
COL4A4-201ENST00000396625 TRIP13Q15645 432 aaPredicted RBP11.1□□□□□ -0.63
COL4A4-201ENST00000396625 ASCC2Q9H1I8 757 aaPredicted RBP11.1□□□□□ -0.63
COL4A4-201ENST00000396625 CPSF3Q9UKF6 684 aaKnown RBP11.1□□□□□ -0.63
COL4A4-201ENST00000396625 CAB39Q9Y376 341 aaPredicted RBP11.1□□□□□ -0.63
COL4A4-201ENST00000396625 PARD3Q8TEW0 1356 aa11.1□□□□□ -0.63
COL4A4-201ENST00000396625 EIF4G3O43432 1585 aaKnown RBP11.1□□□□□ -0.63
COL4A4-201ENST00000396625 SEC24BO95487 1268 aa11.1□□□□□ -0.63
COL4A4-201ENST00000396625 RAB14P61106 215 aa11.1□□□□□ -0.63
COL4A4-201ENST00000396625 TBL3Q12788 808 aaKnown RBP11.1□□□□□ -0.63
COL4A4-201ENST00000396625 MRPS26Q9BYN8 205 aaKnown RBP11.1□□□□□ -0.63
COL4A4-201ENST00000396625 EDEM3Q9BZQ6 932 aa11.1□□□□□ -0.63
COL4A4-201ENST00000396625 TESPA1A2RU30 521 aaPredicted RBP11.1□□□□□ -0.63
COL4A4-201ENST00000396625 WDR64B1ANS9 1081 aa11.1□□□□□ -0.63
COL4A4-201ENST00000396625 PPARGP37231 505 aaPredicted RBP11.1□□□□□ -0.63
COL4A4-201ENST00000396625 ADALQ6DHV7 355 aa11.1□□□□□ -0.63
COL4A4-201ENST00000396625 KRT27Q7Z3Y8 459 aa11.1□□□□□ -0.63
COL4A4-201ENST00000396625 SLC17A8Q8NDX2 589 aa11.1□□□□□ -0.63
COL4A4-201ENST00000396625 TRIM45Q9H8W5 580 aaPredicted RBP11.1□□□□□ -0.63
COL4A4-201ENST00000396625 CCDC78A2IDD5 438 aa11.1□□□□□ -0.63
COL4A4-201ENST00000396625 MFAP3P55082 362 aa11.1□□□□□ -0.63
COL4A4-201ENST00000396625 ADAM9Q13443 819 aa11.1□□□□□ -0.63
COL4A4-201ENST00000396625 ASZ1Q8WWH4 475 aa11.1□□□□□ -0.63
COL4A4-201ENST00000396625 CCDC127Q96BQ5 260 aa11.1□□□□□ -0.63
COL4A4-201ENST00000396625 CALN1Q9BXU9 219 aa11.1□□□□□ -0.63
COL4A4-201ENST00000396625 NSMFQ6X4W1 530 aa11.1□□□□□ -0.63
COL4A4-201ENST00000396625 PYROXD1Q8WU10 500 aa11.1□□□□□ -0.63
COL4A4-201ENST00000396625 CNOT6LQ96LI5 555 aaKnown RBP11.1□□□□□ -0.63
COL4A4-201ENST00000396625 PITPNM3Q9BZ71 974 aa11.1□□□□□ -0.63
COL4A4-201ENST00000396625 SOS2Q07890 1332 aaPredicted RBP11.09□□□□□ -0.63
COL4A4-201ENST00000396625 GOLGA8FQ08AF8 430 aa11.09□□□□□ -0.63
COL4A4-201ENST00000396625 GOLGA8DPQ0D2H9 430 aa11.09□□□□□ -0.63
COL4A4-201ENST00000396625 CENPUQ71F23 418 aa11.09□□□□□ -0.63
COL4A4-201ENST00000396625 EPM2AIP1Q7L775 607 aaPredicted RBP11.09□□□□□ -0.63
COL4A4-201ENST00000396625 SERTAD1Q9UHV2 236 aa11.09□□□□□ -0.63
COL4A4-201ENST00000396625 ATP8B3O60423 1300 aa11.09□□□□□ -0.63
COL4A4-201ENST00000396625 LRRIQ4A6NIV6 560 aa11.09□□□□□ -0.63
COL4A4-201ENST00000396625 IPO5O00410 1097 aaKnown RBP11.09□□□□□ -0.63
COL4A4-201ENST00000396625 DIAPH2O60879 1101 aa11.09□□□□□ -0.63
COL4A4-201ENST00000396625 CASP14P31944 242 aa11.09□□□□□ -0.63
COL4A4-201ENST00000396625 AP1B1Q10567 949 aa11.09□□□□□ -0.63
COL4A4-201ENST00000396625 NUGGCQ68CJ6 796 aa11.09□□□□□ -0.63
COL4A4-201ENST00000396625 BTNL9Q6UXG8 535 aa11.09□□□□□ -0.63
COL4A4-201ENST00000396625 BTBD6Q96KE9 485 aa11.09□□□□□ -0.63
COL4A4-201ENST00000396625 SLC39A2Q9NP94 309 aa11.09□□□□□ -0.63
COL4A4-201ENST00000396625 PLAAQ9Y263 795 aa11.09□□□□□ -0.63
COL4A4-201ENST00000396625 LRRN2O75325 713 aa11.09□□□□□ -0.63
COL4A4-201ENST00000396625 ANP32DO95626 131 aa11.09□□□□□ -0.63
COL4A4-201ENST00000396625 BTN2A2Q8WVV5 523 aa11.09□□□□□ -0.63
COL4A4-201ENST00000396625 PBKQ96KB5 322 aa11.09□□□□□ -0.63
COL4A4-201ENST00000396625 ZFYVE1Q9HBF4 777 aa11.09□□□□□ -0.63
COL4A4-201ENST00000396625 FANCLQ9NW38 375 aa11.09□□□□□ -0.63
COL4A4-201ENST00000396625 DYTNA2CJ06 578 aa11.09□□□□□ -0.63
COL4A4-201ENST00000396625 SNX2O60749 519 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms