RNA–Protein interactions for RNA: ENST00000394817.6

SIL1-202, Transcript of SIL1 nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIL1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-202ENST00000394817 FAM86B2P0C5J1 330 aa20.65■□□□□ 0.9
SIL1-202ENST00000394817 SLC12A3P55017 1021 aa20.65■□□□□ 0.9
SIL1-202ENST00000394817 TRAF1Q13077 416 aa20.65■□□□□ 0.9
SIL1-202ENST00000394817 LRRC41Q15345 812 aa20.65■□□□□ 0.9
SIL1-202ENST00000394817 NBPF9Q3BBW0 867 aa20.65■□□□□ 0.9
SIL1-202ENST00000394817 ZNF662Q6ZS27 426 aa20.65■□□□□ 0.9
SIL1-202ENST00000394817 RSRC2Q7L4I2 434 aaKnown RBP20.65■□□□□ 0.9
SIL1-202ENST00000394817 GOPCQ9HD26 462 aa20.65■□□□□ 0.9
SIL1-202ENST00000394817 ZNHIT6Q9NWK9 470 aaKnown RBP20.65■□□□□ 0.9
SIL1-202ENST00000394817 ZBTB21Q9ULJ3 1066 aa20.65■□□□□ 0.9
SIL1-202ENST00000394817 PCDHA2Q9Y5H9 948 aa20.65■□□□□ 0.9
SIL1-202ENST00000394817 STK24Q9Y6E0 443 aa20.65■□□□□ 0.9
SIL1-202ENST00000394817 FKBP1CQ5VVH2 108 aa20.65■□□□□ 0.9
SIL1-202ENST00000394817 CCDC170Q8IYT3 715 aa20.65■□□□□ 0.9
SIL1-202ENST00000394817 MTMR14Q8NCE2 650 aa20.65■□□□□ 0.9
SIL1-202ENST00000394817 ERMNQ8TAM6 284 aa20.65■□□□□ 0.9
SIL1-202ENST00000394817 ZBED3Q96IU2 234 aaPredicted RBP20.65■□□□□ 0.9
SIL1-202ENST00000394817 PCMTD1Q96MG8 357 aaPredicted RBP20.65■□□□□ 0.9
SIL1-202ENST00000394817 UIMC1Q96RL1 719 aa20.65■□□□□ 0.9
SIL1-202ENST00000394817 CDC23Q9UJX2 597 aa20.65■□□□□ 0.9
SIL1-202ENST00000394817 POTEFA5A3E0 1075 aa20.64■□□□□ 0.89
SIL1-202ENST00000394817 SPDYE4A6NLX3 237 aa20.64■□□□□ 0.89
SIL1-202ENST00000394817 POTEIP0CG38 1075 aa20.64■□□□□ 0.89
SIL1-202ENST00000394817 TAL1P17542 331 aaPredicted RBP20.64■□□□□ 0.89
SIL1-202ENST00000394817 RPA1P27694 616 aa20.64■□□□□ 0.89
SIL1-202ENST00000394817 CYLC1P35663 651 aaPredicted RBP20.64■□□□□ 0.89
SIL1-202ENST00000394817 KIAA1755Q5JYT7 1200 aa20.64■□□□□ 0.89
SIL1-202ENST00000394817 POTEGQ6S5H5 508 aa20.64■□□□□ 0.89
SIL1-202ENST00000394817 POTEEQ6S8J3 1075 aa20.64■□□□□ 0.89
SIL1-202ENST00000394817 CCDC84Q86UT8 332 aaPredicted RBP20.64■□□□□ 0.89
SIL1-202ENST00000394817 NAPGQ99747 312 aaPredicted RBP20.64■□□□□ 0.89
SIL1-202ENST00000394817 TMEM39BQ9GZU3 492 aa20.64■□□□□ 0.89
SIL1-202ENST00000394817 HAUS4Q9H6D7 363 aa20.64■□□□□ 0.89
SIL1-202ENST00000394817 SCAF8Q9UPN6 1271 aaKnown RBP20.64■□□□□ 0.89
SIL1-202ENST00000394817 WNT10BO00744 389 aa20.63■□□□□ 0.89
SIL1-202ENST00000394817 EGFRP00533 1210 aa20.63■□□□□ 0.89
SIL1-202ENST00000394817 HNRNPH3P31942 346 aaKnown RBP20.63■□□□□ 0.89
SIL1-202ENST00000394817 CLCN6P51797 869 aa20.63■□□□□ 0.89
SIL1-202ENST00000394817 HERVK_113P62684 666 aa20.63■□□□□ 0.89
SIL1-202ENST00000394817 KRT83P78385 493 aa20.63■□□□□ 0.89
SIL1-202ENST00000394817 CBX1P83916 185 aa20.63■□□□□ 0.89
SIL1-202ENST00000394817 FKBP3Q00688 224 aaKnown RBP20.63■□□□□ 0.89
SIL1-202ENST00000394817 CATSPER3Q86XQ3 398 aa20.63■□□□□ 0.89
SIL1-202ENST00000394817 ACER1Q8TDN7 264 aa20.63■□□□□ 0.89
SIL1-202ENST00000394817 MYOZ2Q9NPC6 264 aa20.63■□□□□ 0.89
SIL1-202ENST00000394817 ZNF446Q9NWS9 450 aa20.63■□□□□ 0.89
SIL1-202ENST00000394817 TBC1D12O60347 775 aa20.63■□□□□ 0.89
SIL1-202ENST00000394817 HOXA13P31271 388 aaPredicted RBP20.63■□□□□ 0.89
SIL1-202ENST00000394817 TNIP1Q15025 636 aa20.63■□□□□ 0.89
SIL1-202ENST00000394817 KIF4BQ2VIQ3 1234 aa20.63■□□□□ 0.89
SIL1-202ENST00000394817 NCAPH2Q6IBW4 605 aa20.63■□□□□ 0.89
SIL1-202ENST00000394817 GPR161Q8N6U8 529 aaKnown RBP20.63■□□□□ 0.89
SIL1-202ENST00000394817 GOLGA1Q92805 767 aa20.63■□□□□ 0.89
SIL1-202ENST00000394817 CEP63Q96MT8 703 aa20.63■□□□□ 0.89
SIL1-202ENST00000394817 FGFBP2Q9BYJ0 223 aa20.63■□□□□ 0.89
SIL1-202ENST00000394817 ARGLU1Q9NWB6 273 aaPredicted RBP20.63■□□□□ 0.89
SIL1-202ENST00000394817 VAV3Q9UKW4 847 aa20.63■□□□□ 0.89
SIL1-202ENST00000394817 LTBP3Q9NS15 1303 aa20.62■□□□□ 0.89
SIL1-202ENST00000394817 EIF3CLB5ME19 914 aaKnown RBP20.62■□□□□ 0.89
SIL1-202ENST00000394817 MSH4O15457 936 aa20.62■□□□□ 0.89
SIL1-202ENST00000394817 KIF20AO95235 890 aa20.62■□□□□ 0.89
SIL1-202ENST00000394817 SPATA31C1P0DKV0 1188 aa20.62■□□□□ 0.89
SIL1-202ENST00000394817 ARSHQ5FYA8 562 aa20.62■□□□□ 0.89
SIL1-202ENST00000394817 FAM83BQ5T0W9 1011 aa20.62■□□□□ 0.89
SIL1-202ENST00000394817 SRGAP1Q7Z6B7 1085 aa20.62■□□□□ 0.89
SIL1-202ENST00000394817 RABGGTAQ92696 567 aa20.62■□□□□ 0.89
SIL1-202ENST00000394817 EIF3CQ99613 913 aaKnown RBP20.62■□□□□ 0.89
SIL1-202ENST00000394817 NHEJ1Q9H9Q4 299 aaPredicted RBP20.62■□□□□ 0.89
SIL1-202ENST00000394817 COL4A3BPQ9Y5P4 624 aa20.62■□□□□ 0.89
SIL1-202ENST00000394817 NPHP3-ACAD11A0A0J9YXS1 232 aa20.61■□□□□ 0.89
SIL1-202ENST00000394817 CEP112Q8N8E3 955 aa20.61■□□□□ 0.89
SIL1-202ENST00000394817 RANBP17Q9H2T7 1088 aaKnown RBP20.61■□□□□ 0.89
SIL1-202ENST00000394817 PLAGL2Q9UPG8 496 aa20.61■□□□□ 0.89
SIL1-202ENST00000394817 IGLV3-22A0A075B6J6 115 aa20.61■□□□□ 0.89
SIL1-202ENST00000394817 PLA2G6O60733 806 aa20.61■□□□□ 0.89
SIL1-202ENST00000394817 MARSP56192 900 aaKnown RBP20.61■□□□□ 0.89
SIL1-202ENST00000394817 HERC4Q5GLZ8 1057 aaPredicted RBP20.61■□□□□ 0.89
SIL1-202ENST00000394817 FAM83AQ86UY5 434 aa20.61■□□□□ 0.89
SIL1-202ENST00000394817 LOXHD1Q8IVV2 1947 aa20.61■□□□□ 0.89
SIL1-202ENST00000394817 ZC3H3Q8IXZ2 948 aaKnown RBP20.61■□□□□ 0.89
SIL1-202ENST00000394817 SYT2Q8N9I0 419 aaPredicted RBP20.61■□□□□ 0.89
SIL1-202ENST00000394817 SCFD1Q8WVM8 642 aa20.61■□□□□ 0.89
SIL1-202ENST00000394817 KCTD10Q9H3F6 313 aa20.61■□□□□ 0.89
SIL1-202ENST00000394817 FAM53CQ9NYF3 392 aa20.61■□□□□ 0.89
SIL1-202ENST00000394817 DNM3Q9UQ16 869 aa20.61■□□□□ 0.89
SIL1-202ENST00000394817 TEX35Q5T0J7 233 aa20.6■□□□□ 0.89
SIL1-202ENST00000394817 PPP4R3CPQ6ZMV5 832 aa20.6■□□□□ 0.89
SIL1-202ENST00000394817 KCTD17Q8N5Z5 321 aa20.6■□□□□ 0.89
SIL1-202ENST00000394817 CHURC1Q8WUH1 139 aa20.6■□□□□ 0.89
SIL1-202ENST00000394817 VCPKMTQ9H867 229 aa20.6■□□□□ 0.89
SIL1-202ENST00000394817 TBC1D7Q9P0N9 293 aa20.6■□□□□ 0.89
SIL1-202ENST00000394817 TRIM10Q9UDY6 481 aa20.6■□□□□ 0.89
SIL1-202ENST00000394817 GJA3Q9Y6H8 435 aa20.6■□□□□ 0.89
SIL1-202ENST00000394817 TRAF5O00463 557 aa20.59■□□□□ 0.89
SIL1-202ENST00000394817 EPHB6O15197 1021 aa20.59■□□□□ 0.89
SIL1-202ENST00000394817 IPO7O95373 1038 aaKnown RBP20.59■□□□□ 0.89
SIL1-202ENST00000394817 GNA14O95837 355 aa20.59■□□□□ 0.89
SIL1-202ENST00000394817 KRT18P05783 430 aaKnown RBP20.59■□□□□ 0.89
SIL1-202ENST00000394817 GMPSP49915 693 aaPredicted RBP20.59■□□□□ 0.89
SIL1-202ENST00000394817 CHMP4BP1P59074 171 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms