RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 ALS2CLQ60I27 953 aa19.82■□□□□ 0.76
ERCC2-201ENST00000391941 PHLPP1O60346 1717 aa19.81■□□□□ 0.76
ERCC2-201ENST00000391941 CEP104O60308 925 aa19.81■□□□□ 0.76
ERCC2-201ENST00000391941 KIAA0754O94854 1291 aa19.81■□□□□ 0.76
ERCC2-201ENST00000391941 SF3B3Q15393 1217 aaKnown RBP19.81■□□□□ 0.76
ERCC2-201ENST00000391941 UNC13DQ70J99 1090 aa19.81■□□□□ 0.76
ERCC2-201ENST00000391941 EYA3Q99504 573 aa19.81■□□□□ 0.76
ERCC2-201ENST00000391941 CELF4Q9BZC1 486 aaKnown RBP19.81■□□□□ 0.76
ERCC2-201ENST00000391941 SLC9C1Q4G0N8 1177 aa19.81■□□□□ 0.76
ERCC2-201ENST00000391941 SLC16A2P36021 539 aa19.81■□□□□ 0.76
ERCC2-201ENST00000391941 PPP1R2P41236 205 aa19.81■□□□□ 0.76
ERCC2-201ENST00000391941 FNTAP49354 379 aa19.81■□□□□ 0.76
ERCC2-201ENST00000391941 SKOR1P84550 965 aa19.81■□□□□ 0.76
ERCC2-201ENST00000391941 PTGISQ16647 500 aa19.81■□□□□ 0.76
ERCC2-201ENST00000391941 GJB7Q6PEY0 223 aa19.81■□□□□ 0.76
ERCC2-201ENST00000391941 CCDC84Q86UT8 332 aaPredicted RBP19.81■□□□□ 0.76
ERCC2-201ENST00000391941 MYCBPAPQ8TBZ2 947 aa19.81■□□□□ 0.76
ERCC2-201ENST00000391941 RUBCNQ92622 972 aa19.81■□□□□ 0.76
ERCC2-201ENST00000391941 ANKS1AQ92625 1134 aa19.81■□□□□ 0.76
ERCC2-201ENST00000391941 C6orf50Q9HD87 102 aa19.81■□□□□ 0.76
ERCC2-201ENST00000391941 ANKIB1Q9P2G1 1089 aa19.81■□□□□ 0.76
ERCC2-201ENST00000391941 PPP1R37O75864 691 aa19.8■□□□□ 0.76
ERCC2-201ENST00000391941 EPB41P11171 864 aaKnown RBP19.8■□□□□ 0.76
ERCC2-201ENST00000391941 SLC9A1P19634 815 aa19.8■□□□□ 0.76
ERCC2-201ENST00000391941 KLHL30Q0D2K2 578 aa19.8■□□□□ 0.76
ERCC2-201ENST00000391941 COASYQ13057 564 aa19.8■□□□□ 0.76
ERCC2-201ENST00000391941 KRT25Q7Z3Z0 450 aa19.8■□□□□ 0.76
ERCC2-201ENST00000391941 NLRP14Q86W24 1093 aa19.8■□□□□ 0.76
ERCC2-201ENST00000391941 IQCDQ96DY2 449 aa19.8■□□□□ 0.76
ERCC2-201ENST00000391941 INPP4AQ96PE3 977 aaPredicted RBP19.8■□□□□ 0.76
ERCC2-201ENST00000391941 SEC63Q9UGP8 760 aaKnown RBP19.8■□□□□ 0.76
ERCC2-201ENST00000391941 MEFVO15553 781 aaPredicted RBP19.8■□□□□ 0.76
ERCC2-201ENST00000391941 STAT3P40763 770 aa19.8■□□□□ 0.76
ERCC2-201ENST00000391941 PAK2Q13177 524 aa19.8■□□□□ 0.76
ERCC2-201ENST00000391941 NFIXQ14938 502 aa19.8■□□□□ 0.76
ERCC2-201ENST00000391941 UAP1Q16222 522 aaPredicted RBP19.8■□□□□ 0.76
ERCC2-201ENST00000391941 RREB1Q92766 1687 aa19.8■□□□□ 0.76
ERCC2-201ENST00000391941 EP400Q96L91 3159 aa19.79■□□□□ 0.76
ERCC2-201ENST00000391941 TMCO5BA8MYB1 307 aa19.79■□□□□ 0.76
ERCC2-201ENST00000391941 PJA2O43164 708 aa19.79■□□□□ 0.76
ERCC2-201ENST00000391941 LDHBP07195 334 aaKnown RBP19.79■□□□□ 0.76
ERCC2-201ENST00000391941 HSD17B3P37058 310 aa19.79■□□□□ 0.76
ERCC2-201ENST00000391941 PTK2Q05397 1052 aa19.79■□□□□ 0.76
ERCC2-201ENST00000391941 SF3B2Q13435 895 aaKnown RBP19.79■□□□□ 0.76
ERCC2-201ENST00000391941 RAD54LQ92698 747 aa19.79■□□□□ 0.76
ERCC2-201ENST00000391941 EPN3Q9H201 632 aa19.79■□□□□ 0.76
ERCC2-201ENST00000391941 DPH5Q9H2P9 285 aa19.79■□□□□ 0.76
ERCC2-201ENST00000391941 BCS1LQ9Y276 419 aa19.79■□□□□ 0.76
ERCC2-201ENST00000391941 SCN7AQ01118 1682 aa19.79■□□□□ 0.76
ERCC2-201ENST00000391941 TAL1P17542 331 aaPredicted RBP19.79■□□□□ 0.76
ERCC2-201ENST00000391941 CASP5P51878 434 aa19.79■□□□□ 0.76
ERCC2-201ENST00000391941 MKRN4PQ13434 485 aaPredicted RBP19.79■□□□□ 0.76
ERCC2-201ENST00000391941 AMIGO3Q86WK7 504 aa19.79■□□□□ 0.76
ERCC2-201ENST00000391941 MARCH10Q8NA82 808 aaPredicted RBP19.79■□□□□ 0.76
ERCC2-201ENST00000391941 MDM1Q8TC05 714 aa19.79■□□□□ 0.76
ERCC2-201ENST00000391941 UBLCP1Q8WVY7 318 aaPredicted RBP19.79■□□□□ 0.76
ERCC2-201ENST00000391941 ATP6V1G3Q96LB4 118 aa19.79■□□□□ 0.76
ERCC2-201ENST00000391941 MTMR9Q96QG7 549 aa19.79■□□□□ 0.76
ERCC2-201ENST00000391941 CNOT8Q9UFF9 292 aaKnown RBP19.79■□□□□ 0.76
ERCC2-201ENST00000391941 AMACRQ9UHK6 382 aa19.79■□□□□ 0.76
ERCC2-201ENST00000391941 AJAP1Q9UKB5 411 aaPredicted RBP19.79■□□□□ 0.76
ERCC2-201ENST00000391941 CASZ1Q86V15 1759 aa19.79■□□□□ 0.76
ERCC2-201ENST00000391941 MARCH6O60337 910 aa19.78■□□□□ 0.76
ERCC2-201ENST00000391941 NAB2Q15742 525 aa19.78■□□□□ 0.76
ERCC2-201ENST00000391941 COBLL1Q53SF7 1204 aa19.78■□□□□ 0.76
ERCC2-201ENST00000391941 SLC30A10Q6XR72 485 aa19.78■□□□□ 0.76
ERCC2-201ENST00000391941 MYOCDQ8IZQ8 938 aa19.78■□□□□ 0.76
ERCC2-201ENST00000391941 GUF1Q8N442 669 aaKnown RBP19.78■□□□□ 0.76
ERCC2-201ENST00000391941 ZNF652Q9Y2D9 606 aa19.78■□□□□ 0.76
ERCC2-201ENST00000391941 COL4A3BPQ9Y5P4 624 aa19.78■□□□□ 0.76
ERCC2-201ENST00000391941 KIAA1551Q9HCM1 1747 aa19.78■□□□□ 0.76
ERCC2-201ENST00000391941 ECM2O94769 699 aaPredicted RBP19.78■□□□□ 0.76
ERCC2-201ENST00000391941 ECHS1P30084 290 aa19.78■□□□□ 0.76
ERCC2-201ENST00000391941 MDH1P40925 334 aaKnown RBP19.78■□□□□ 0.76
ERCC2-201ENST00000391941 CDK8P49336 464 aa19.78■□□□□ 0.76
ERCC2-201ENST00000391941 ITGB3BPQ13352 177 aaPredicted RBP19.78■□□□□ 0.76
ERCC2-201ENST00000391941 ODF2Q5BJF6 829 aa19.78■□□□□ 0.76
ERCC2-201ENST00000391941 MEI1Q5TIA1 1274 aa19.78■□□□□ 0.76
ERCC2-201ENST00000391941 TTBK2Q6IQ55 1244 aa19.78■□□□□ 0.76
ERCC2-201ENST00000391941 KDM7AQ6ZMT4 941 aa19.78■□□□□ 0.76
ERCC2-201ENST00000391941 LINC00116Q8NCU8 138 aa19.78■□□□□ 0.76
ERCC2-201ENST00000391941 PANK4Q9NVE7 773 aa19.78■□□□□ 0.76
ERCC2-201ENST00000391941 SMIM23A6NLE4 172 aa19.77■□□□□ 0.76
ERCC2-201ENST00000391941 MEIS1O00470 390 aa19.77■□□□□ 0.76
ERCC2-201ENST00000391941 NR2E1Q9Y466 385 aa19.77■□□□□ 0.76
ERCC2-201ENST00000391941 ATP6V0A2Q9Y487 856 aa19.77■□□□□ 0.76
ERCC2-201ENST00000391941 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.77■□□□□ 0.76
ERCC2-201ENST00000391941 XIRP1Q702N8 1843 aaKnown RBP19.77■□□□□ 0.76
ERCC2-201ENST00000391941 POTEB3A0JP26 581 aa19.77■□□□□ 0.76
ERCC2-201ENST00000391941 POTECB2RU33 542 aa19.77■□□□□ 0.76
ERCC2-201ENST00000391941 DAPK3O43293 454 aa19.77■□□□□ 0.76
ERCC2-201ENST00000391941 TNFRSF8P28908 595 aa19.77■□□□□ 0.76
ERCC2-201ENST00000391941 UBAP2Q5T6F2 1119 aaKnown RBP19.77■□□□□ 0.76
ERCC2-201ENST00000391941 POTEBQ6S5H4 581 aa19.77■□□□□ 0.76
ERCC2-201ENST00000391941 SUGP1Q8IWZ8 645 aaKnown RBP19.77■□□□□ 0.76
ERCC2-201ENST00000391941 USP38Q8NB14 1042 aa19.77■□□□□ 0.76
ERCC2-201ENST00000391941 KIAA1024Q9UPX6 916 aa19.77■□□□□ 0.76
ERCC2-201ENST00000391941 LAMB1P07942 1786 aa19.77■□□□□ 0.76
ERCC2-201ENST00000391941 MYH1P12882 1939 aa19.77■□□□□ 0.76
ERCC2-201ENST00000391941 PICALMQ13492 652 aa19.77■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms