RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 SSH3Q8TE77 659 aa17.43■□□□□ 0.38
SHANK1-204ENST00000391814 TTC1Q99614 292 aa17.43■□□□□ 0.38
SHANK1-204ENST00000391814 RIOK1Q9BRS2 568 aaKnown RBP17.43■□□□□ 0.38
SHANK1-204ENST00000391814 ARHGEF10LQ9HCE6 1279 aa17.43■□□□□ 0.38
SHANK1-204ENST00000391814 RAPGEF6Q8TEU7 1601 aa17.43■□□□□ 0.38
SHANK1-204ENST00000391814 IQANK1A0A1B0GTG1 560 aa17.43■□□□□ 0.38
SHANK1-204ENST00000391814 PDE8AO60658 829 aa17.43■□□□□ 0.38
SHANK1-204ENST00000391814 TMOD1P28289 359 aa17.43■□□□□ 0.38
SHANK1-204ENST00000391814 EPN3Q9H201 632 aa17.43■□□□□ 0.38
SHANK1-204ENST00000391814 NDE1Q9NXR1 346 aa17.43■□□□□ 0.38
SHANK1-204ENST00000391814 GCNT4Q9P109 453 aa17.43■□□□□ 0.38
SHANK1-204ENST00000391814 TNKSO95271 1327 aa17.43■□□□□ 0.38
SHANK1-204ENST00000391814 GCC2Q8IWJ2 1684 aa17.43■□□□□ 0.38
SHANK1-204ENST00000391814 ESYT3A0FGR9 886 aa17.43■□□□□ 0.38
SHANK1-204ENST00000391814 ACTN1P12814 892 aa17.43■□□□□ 0.38
SHANK1-204ENST00000391814 DARS2Q6PI48 645 aaKnown RBP17.43■□□□□ 0.38
SHANK1-204ENST00000391814 EAF2Q96CJ1 260 aaPredicted RBP17.43■□□□□ 0.38
SHANK1-204ENST00000391814 LRRC37BQ96QE4 947 aa17.43■□□□□ 0.38
SHANK1-204ENST00000391814 CD248Q9HCU0 757 aa17.43■□□□□ 0.38
SHANK1-204ENST00000391814 RASA4BC9J798 803 aa17.43■□□□□ 0.38
SHANK1-204ENST00000391814 RASA4O43374 803 aa17.43■□□□□ 0.38
SHANK1-204ENST00000391814 CCDC159P0C7I6 412 aa17.43■□□□□ 0.38
SHANK1-204ENST00000391814 ZSCAN20P17040 1043 aaPredicted RBP17.43■□□□□ 0.38
SHANK1-204ENST00000391814 SCP2P22307 547 aa17.43■□□□□ 0.38
SHANK1-204ENST00000391814 TSTA3Q13630 321 aaPredicted RBP17.43■□□□□ 0.38
SHANK1-204ENST00000391814 C4orf50Q6ZRC1 276 aa17.43■□□□□ 0.38
SHANK1-204ENST00000391814 TEX9Q8N6V9 391 aa17.43■□□□□ 0.38
SHANK1-204ENST00000391814 RAPGEF5Q92565 580 aa17.43■□□□□ 0.38
SHANK1-204ENST00000391814 MEFVO15553 781 aaPredicted RBP17.43■□□□□ 0.38
SHANK1-204ENST00000391814 FAM178BQ8IXR5 827 aa17.43■□□□□ 0.38
SHANK1-204ENST00000391814 CHMP6Q96FZ7 201 aa17.43■□□□□ 0.38
SHANK1-204ENST00000391814 DCTN4Q9UJW0 460 aa17.43■□□□□ 0.38
SHANK1-204ENST00000391814 SNX24Q9Y343 169 aa17.43■□□□□ 0.38
SHANK1-204ENST00000391814 CLIC2O15247 247 aa17.42■□□□□ 0.38
SHANK1-204ENST00000391814 TTI1O43156 1089 aa17.42■□□□□ 0.38
SHANK1-204ENST00000391814 YARSP54577 528 aaKnown RBP17.42■□□□□ 0.38
SHANK1-204ENST00000391814 CSRNP1Q96S65 589 aa17.42■□□□□ 0.38
SHANK1-204ENST00000391814 SAYSD1Q9NPB0 183 aa17.42■□□□□ 0.38
SHANK1-204ENST00000391814 COL4A3BPQ9Y5P4 624 aa17.42■□□□□ 0.38
SHANK1-204ENST00000391814 ABCC2Q92887 1545 aa17.42■□□□□ 0.38
SHANK1-204ENST00000391814 HAUS5O94927 633 aa17.42■□□□□ 0.38
SHANK1-204ENST00000391814 PRPSAP1Q14558 356 aa17.42■□□□□ 0.38
SHANK1-204ENST00000391814 TMTC4Q5T4D3 741 aa17.42■□□□□ 0.38
SHANK1-204ENST00000391814 MAGEF1Q9HAY2 307 aa17.42■□□□□ 0.38
SHANK1-204ENST00000391814 TLR7Q9NYK1 1049 aaKnown RBP17.42■□□□□ 0.38
SHANK1-204ENST00000391814 KIAA1024Q9UPX6 916 aa17.42■□□□□ 0.38
SHANK1-204ENST00000391814 NCKAP5LQ9HCH0 1330 aa17.42■□□□□ 0.38
SHANK1-204ENST00000391814 USP14P54578 494 aa17.42■□□□□ 0.38
SHANK1-204ENST00000391814 NBPF20Q3BBV1 942 aa17.42■□□□□ 0.38
SHANK1-204ENST00000391814 ZNF408Q9H9D4 720 aa17.42■□□□□ 0.38
SHANK1-204ENST00000391814 ARPP21Q9UBL0 812 aaPredicted RBP17.42■□□□□ 0.38
SHANK1-204ENST00000391814 GFPT1Q06210 699 aaPredicted RBP17.42■□□□□ 0.38
SHANK1-204ENST00000391814 ZNF790Q6PG37 636 aa17.42■□□□□ 0.38
SHANK1-204ENST00000391814 RASGRP4Q8TDF6 673 aa17.42■□□□□ 0.38
SHANK1-204ENST00000391814 LARP4BQ92615 738 aaKnown RBP17.42■□□□□ 0.38
SHANK1-204ENST00000391814 PDLIM2Q96JY6 352 aa17.42■□□□□ 0.38
SHANK1-204ENST00000391814 PALM3A6NDB9 673 aaPredicted RBP17.42■□□□□ 0.38
SHANK1-204ENST00000391814 A6NJR5 290 aa17.42■□□□□ 0.38
SHANK1-204ENST00000391814 MMS19Q96T76 1030 aa17.42■□□□□ 0.38
SHANK1-204ENST00000391814 PSTPIP2Q9H939 334 aa17.42■□□□□ 0.38
SHANK1-204ENST00000391814 ABCA10Q8WWZ4 1543 aa17.41■□□□□ 0.38
SHANK1-204ENST00000391814 NOP56O00567 594 aaKnown RBP17.41■□□□□ 0.38
SHANK1-204ENST00000391814 DDAH1O94760 285 aa17.41■□□□□ 0.38
SHANK1-204ENST00000391814 TMPRSS15P98073 1019 aa17.41■□□□□ 0.38
SHANK1-204ENST00000391814 CCDC124Q96CT7 223 aaKnown RBP17.41■□□□□ 0.38
SHANK1-204ENST00000391814 ARHGAP10A1A4S6 786 aa17.41■□□□□ 0.38
SHANK1-204ENST00000391814 S100BP04271 92 aaPredicted RBP17.41■□□□□ 0.38
SHANK1-204ENST00000391814 PSMC2P35998 433 aaKnown RBP17.41■□□□□ 0.38
SHANK1-204ENST00000391814 GNL1P36915 607 aaPredicted RBP17.41■□□□□ 0.38
SHANK1-204ENST00000391814 PMS1P54277 932 aaKnown RBP17.41■□□□□ 0.38
SHANK1-204ENST00000391814 ATG3Q9NT62 314 aa17.41■□□□□ 0.38
SHANK1-204ENST00000391814 ATP8A2Q9NTI2 1148 aa17.41■□□□□ 0.38
SHANK1-204ENST00000391814 TSC22D4Q9Y3Q8 395 aa17.41■□□□□ 0.38
SHANK1-204ENST00000391814 NEURL1BA8MQ27 555 aa17.41■□□□□ 0.38
SHANK1-204ENST00000391814 UBE2TQ9NPD8 197 aaPredicted RBP17.41■□□□□ 0.38
SHANK1-204ENST00000391814 DBNLQ9UJU6 430 aaKnown RBP17.41■□□□□ 0.38
SHANK1-204ENST00000391814 MCF2LO15068 1137 aa17.41■□□□□ 0.38
SHANK1-204ENST00000391814 CTIFO43310 598 aaKnown RBP17.41■□□□□ 0.38
SHANK1-204ENST00000391814 TTLL7Q6ZT98 887 aa17.41■□□□□ 0.38
SHANK1-204ENST00000391814 DEPTORQ8TB45 409 aa17.41■□□□□ 0.38
SHANK1-204ENST00000391814 SATB2Q9UPW6 733 aa17.41■□□□□ 0.38
SHANK1-204ENST00000391814 DRP2Q13474 957 aa17.41■□□□□ 0.38
SHANK1-204ENST00000391814 PYROXD1Q8WU10 500 aa17.41■□□□□ 0.38
SHANK1-204ENST00000391814 OSBPL9Q96SU4 736 aa17.41■□□□□ 0.38
SHANK1-204ENST00000391814 UPF3AQ9H1J1 476 aaKnown RBP17.41■□□□□ 0.38
SHANK1-204ENST00000391814 MROH5Q6ZUA9 1318 aa17.4■□□□□ 0.38
SHANK1-204ENST00000391814 PAIP2BQ9ULR5 123 aaKnown RBP17.4■□□□□ 0.38
SHANK1-204ENST00000391814 NOD1Q9Y239 953 aa17.4■□□□□ 0.38
SHANK1-204ENST00000391814 SYCE1LA8MT33 242 aa17.4■□□□□ 0.38
SHANK1-204ENST00000391814 HNRNPH1P31943 449 aaKnown RBP17.4■□□□□ 0.38
SHANK1-204ENST00000391814 SPOPLQ6IQ16 392 aa17.4■□□□□ 0.38
SHANK1-204ENST00000391814 LONP2Q86WA8 852 aa17.4■□□□□ 0.38
SHANK1-204ENST00000391814 KIFC3Q9BVG8 833 aa17.4■□□□□ 0.38
SHANK1-204ENST00000391814 USP44Q9H0E7 712 aa17.4■□□□□ 0.38
SHANK1-204ENST00000391814 MMP1P03956 469 aa17.4■□□□□ 0.38
SHANK1-204ENST00000391814 ATP1A1P05023 1023 aaKnown RBP17.4■□□□□ 0.38
SHANK1-204ENST00000391814 VSNL1P62760 191 aa17.4■□□□□ 0.38
SHANK1-204ENST00000391814 RESP18Q5W5W9 173 aa17.4■□□□□ 0.38
SHANK1-204ENST00000391814 DCAF5Q96JK2 942 aa17.4■□□□□ 0.38
SHANK1-204ENST00000391814 KIF9Q9HAQ2 790 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms