RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 CELF3Q5SZQ8 465 aaKnown RBP11.27□□□□□ -0.61
IFT88-203ENST00000389373 MYSM1Q5VVJ2 828 aa11.27□□□□□ -0.61
IFT88-203ENST00000389373 PPP2R3CQ969Q6 453 aa11.27□□□□□ -0.61
IFT88-203ENST00000389373 ZKSCAN3Q9BRR0 538 aa11.27□□□□□ -0.61
IFT88-203ENST00000389373 IRF2BPLQ9H1B7 796 aa11.27□□□□□ -0.61
IFT88-203ENST00000389373 RNF39Q9H2S5 420 aa11.27□□□□□ -0.61
IFT88-203ENST00000389373 RNPEPQ9H4A4 650 aa11.27□□□□□ -0.61
IFT88-203ENST00000389373 PXMP2Q9NR77 195 aa11.27□□□□□ -0.61
IFT88-203ENST00000389373 TCP11L1Q9NUJ3 509 aa11.27□□□□□ -0.61
IFT88-203ENST00000389373 ANAPC4Q9UJX5 808 aa11.27□□□□□ -0.61
IFT88-203ENST00000389373 MRPL11Q9Y3B7 192 aaKnown RBP11.27□□□□□ -0.61
IFT88-203ENST00000389373 MICAL3Q7RTP6 2002 aa11.26□□□□□ -0.61
IFT88-203ENST00000389373 WDFY4Q6ZS81 3184 aa11.26□□□□□ -0.61
IFT88-203ENST00000389373 LOC730098B7Z3J9 87 aa11.26□□□□□ -0.61
IFT88-203ENST00000389373 H3BRB1 525 aa11.26□□□□□ -0.61
IFT88-203ENST00000389373 KDM4AO75164 1064 aa11.26□□□□□ -0.61
IFT88-203ENST00000389373 HSPD1P10809 573 aaKnown RBP11.26□□□□□ -0.61
IFT88-203ENST00000389373 HAND2P61296 217 aa11.26□□□□□ -0.61
IFT88-203ENST00000389373 SIGLEC14Q08ET2 396 aa11.26□□□□□ -0.61
IFT88-203ENST00000389373 GPATCH4Q5T3I0 446 aaKnown RBP11.26□□□□□ -0.61
IFT88-203ENST00000389373 ADGRD2Q7Z7M1 963 aa11.26□□□□□ -0.61
IFT88-203ENST00000389373 ADGRF4Q8IZF3 695 aa11.26□□□□□ -0.61
IFT88-203ENST00000389373 MIER1Q8N108 512 aa11.26□□□□□ -0.61
IFT88-203ENST00000389373 APBB2Q92870 758 aa11.26□□□□□ -0.61
IFT88-203ENST00000389373 MSLNLQ96KJ4 702 aa11.26□□□□□ -0.61
IFT88-203ENST00000389373 TTC14Q96N46 770 aa11.26□□□□□ -0.61
IFT88-203ENST00000389373 C16orf70Q9BSU1 422 aa11.26□□□□□ -0.61
IFT88-203ENST00000389373 TUT1Q9H6E5 874 aaKnown RBP11.26□□□□□ -0.61
IFT88-203ENST00000389373 SETD4Q9NVD3 440 aa11.26□□□□□ -0.61
IFT88-203ENST00000389373 ADGRA3Q8IWK6 1321 aa11.26□□□□□ -0.61
IFT88-203ENST00000389373 EYA4O95677 639 aa11.25□□□□□ -0.61
IFT88-203ENST00000389373 MMP1P03956 469 aa11.25□□□□□ -0.61
IFT88-203ENST00000389373 SNHG28P0DPA3 235 aa11.25□□□□□ -0.61
IFT88-203ENST00000389373 GHRP10912 638 aa11.25□□□□□ -0.61
IFT88-203ENST00000389373 NRIP1P48552 1158 aa11.25□□□□□ -0.61
IFT88-203ENST00000389373 SP2Q02086 613 aa11.25□□□□□ -0.61
IFT88-203ENST00000389373 QRICH1Q2TAL8 776 aa11.25□□□□□ -0.61
IFT88-203ENST00000389373 ASCL5Q7RTU5 278 aa11.25□□□□□ -0.61
IFT88-203ENST00000389373 ZBTB33Q86T24 672 aa11.25□□□□□ -0.61
IFT88-203ENST00000389373 CLEC1BQ9P126 229 aa11.25□□□□□ -0.61
IFT88-203ENST00000389373 BARX2Q9UMQ3 279 aaPredicted RBP11.25□□□□□ -0.61
IFT88-203ENST00000389373 PLAGL2Q9UPG8 496 aa11.25□□□□□ -0.61
IFT88-203ENST00000389373 USP15Q9Y4E8 981 aaPredicted RBP11.25□□□□□ -0.61
IFT88-203ENST00000389373 SUPT16HQ9Y5B9 1047 aaKnown RBP11.25□□□□□ -0.61
IFT88-203ENST00000389373 TECTAO75443 2155 aa11.25□□□□□ -0.61
IFT88-203ENST00000389373 ZNF318Q5VUA4 2279 aa11.25□□□□□ -0.61
IFT88-203ENST00000389373 NOP56O00567 594 aaKnown RBP11.24□□□□□ -0.61
IFT88-203ENST00000389373 ENPP3O14638 875 aa11.24□□□□□ -0.61
IFT88-203ENST00000389373 PPFIA3O75145 1194 aa11.24□□□□□ -0.61
IFT88-203ENST00000389373 RGS20O76081 388 aa11.24□□□□□ -0.61
IFT88-203ENST00000389373 FGAP02671 866 aa11.24□□□□□ -0.61
IFT88-203ENST00000389373 LGALS2P05162 132 aa11.24□□□□□ -0.61
IFT88-203ENST00000389373 FGRP09769 529 aa11.24□□□□□ -0.61
IFT88-203ENST00000389373 LINC00271P0C7V0 271 aa11.24□□□□□ -0.61
IFT88-203ENST00000389373 GNAT1P11488 350 aa11.24□□□□□ -0.61
IFT88-203ENST00000389373 HOXD8P13378 290 aaPredicted RBP11.24□□□□□ -0.61
IFT88-203ENST00000389373 IBSPP21815 317 aaPredicted RBP11.24□□□□□ -0.61
IFT88-203ENST00000389373 DNAJB1P25685 340 aa11.24□□□□□ -0.61
IFT88-203ENST00000389373 ARHGAP4P98171 946 aa11.24□□□□□ -0.61
IFT88-203ENST00000389373 PAN2Q504Q3 1202 aaKnown RBP11.24□□□□□ -0.61
IFT88-203ENST00000389373 UTP14CQ5TAP6 766 aaKnown RBP11.24□□□□□ -0.61
IFT88-203ENST00000389373 KCNV1Q6PIU1 500 aa11.24□□□□□ -0.61
IFT88-203ENST00000389373 MFSD6Q6ZSS7 791 aa11.24□□□□□ -0.61
IFT88-203ENST00000389373 MICAL1Q8TDZ2 1067 aa11.24□□□□□ -0.61
IFT88-203ENST00000389373 GPKOWQ92917 476 aaPredicted RBP eCLIP11.24□□□□□ -0.61
IFT88-203ENST00000389373 PDCD2LQ9BRP1 358 aa11.24□□□□□ -0.61
IFT88-203ENST00000389373 PHF7Q9BWX1 381 aaPredicted RBP11.24□□□□□ -0.61
IFT88-203ENST00000389373 BCAS3Q9H6U6 928 aa11.24□□□□□ -0.61
IFT88-203ENST00000389373 NLRC5Q86WI3 1866 aa11.23□□□□□ -0.61
IFT88-203ENST00000389373 PER2O15055 1255 aa11.23□□□□□ -0.61
IFT88-203ENST00000389373 CAND2O75155 1236 aa11.23□□□□□ -0.61
IFT88-203ENST00000389373 PDGFBP01127 241 aaPredicted RBP11.23□□□□□ -0.61
IFT88-203ENST00000389373 ITGB1P05556 798 aa11.23□□□□□ -0.61
IFT88-203ENST00000389373 UBA1P22314 1058 aaKnown RBP11.23□□□□□ -0.61
IFT88-203ENST00000389373 SP100P23497 879 aaPredicted RBP11.23□□□□□ -0.61
IFT88-203ENST00000389373 CAMK1Q14012 370 aa11.23□□□□□ -0.61
IFT88-203ENST00000389373 CBX2Q14781 532 aaPredicted RBP11.23□□□□□ -0.61
IFT88-203ENST00000389373 ALX1Q15699 326 aa11.23□□□□□ -0.61
IFT88-203ENST00000389373 EFHBQ8N7U6 833 aa11.23□□□□□ -0.61
IFT88-203ENST00000389373 SMRP1Q8NCR6 262 aa11.23□□□□□ -0.61
IFT88-203ENST00000389373 PI4K2BQ8TCG2 481 aa11.23□□□□□ -0.61
IFT88-203ENST00000389373 SPPL3Q8TCT6 385 aa11.23□□□□□ -0.61
IFT88-203ENST00000389373 OTUD7AQ8TE49 926 aaPredicted RBP11.23□□□□□ -0.61
IFT88-203ENST00000389373 POF1BQ8WVV4 589 aa11.23□□□□□ -0.61
IFT88-203ENST00000389373 CLP1Q92989 425 aaKnown RBP11.23□□□□□ -0.61
IFT88-203ENST00000389373 ASIC4Q96FT7 647 aa11.23□□□□□ -0.61
IFT88-203ENST00000389373 PLVAPQ9BX97 442 aa11.23□□□□□ -0.61
IFT88-203ENST00000389373 MAF1Q9H063 256 aa11.23□□□□□ -0.61
IFT88-203ENST00000389373 DCTPP1Q9H773 170 aa11.23□□□□□ -0.61
IFT88-203ENST00000389373 KAT14Q9H8E8 782 aa11.23□□□□□ -0.61
IFT88-203ENST00000389373 TRPC6Q9Y210 931 aa11.23□□□□□ -0.61
IFT88-203ENST00000389373 PCDHGC5Q9Y5F6 944 aa11.23□□□□□ -0.61
IFT88-203ENST00000389373 TTC41PQ6P2S7 1318 aa11.23□□□□□ -0.61
IFT88-203ENST00000389373 CCDC171Q6TFL3 1326 aa11.23□□□□□ -0.61
IFT88-203ENST00000389373 MYH7BA7E2Y1 1941 aa11.22□□□□□ -0.61
IFT88-203ENST00000389373 CHRNA1P02708 482 aa11.22□□□□□ -0.61
IFT88-203ENST00000389373 HOXA13P31271 388 aaPredicted RBP11.22□□□□□ -0.61
IFT88-203ENST00000389373 SP4Q02446 784 aa11.22□□□□□ -0.61
IFT88-203ENST00000389373 COASYQ13057 564 aa11.22□□□□□ -0.61
IFT88-203ENST00000389373 PGM5Q15124 567 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms