RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 GCFC2P16383 781 aaKnown RBP21.28■■□□□ 1
SSU72-203ENST00000378725 LETM2Q2VYF4 491 aa21.28■■□□□ 1
SSU72-203ENST00000378725 HSDL1Q3SXM5 330 aa21.28■■□□□ 1
SSU72-203ENST00000378725 BRDTQ58F21 947 aaPredicted RBP21.28■■□□□ 1
SSU72-203ENST00000378725 NOSTRINQ8IVI9 506 aa21.28■■□□□ 1
SSU72-203ENST00000378725 SPATA33Q96N06 139 aa21.28■■□□□ 1
SSU72-203ENST00000378725 DHX15O43143 795 aaKnown RBP21.27■■□□□ 1
SSU72-203ENST00000378725 PPFIA4O75335 1185 aa21.27■■□□□ 1
SSU72-203ENST00000378725 MMP3P08254 477 aa21.27■■□□□ 1
SSU72-203ENST00000378725 ITGB3BPQ13352 177 aaPredicted RBP21.27■■□□□ 1
SSU72-203ENST00000378725 SENP6Q9GZR1 1112 aaPredicted RBP21.27■■□□□ 1
SSU72-203ENST00000378725 POLR3EQ9NVU0 708 aa21.27■■□□□ 1
SSU72-203ENST00000378725 BRCA2P51587 3418 aa21.26■□□□□ 0.99
SSU72-203ENST00000378725 MYH7BA7E2Y1 1941 aa21.26■□□□□ 0.99
SSU72-203ENST00000378725 A0A1W2PQ45 241 aaPredicted RBP21.26■□□□□ 0.99
SSU72-203ENST00000378725 A0A1W2PQY0 241 aa21.26■□□□□ 0.99
SSU72-203ENST00000378725 IPO5O00410 1097 aaKnown RBP21.26■□□□□ 0.99
SSU72-203ENST00000378725 MSH4O15457 936 aa21.26■□□□□ 0.99
SSU72-203ENST00000378725 CABYRO75952 493 aa21.26■□□□□ 0.99
SSU72-203ENST00000378725 PURAQ00577 322 aaKnown RBP21.26■□□□□ 0.99
SSU72-203ENST00000378725 GNL2Q13823 731 aaKnown RBP21.26■□□□□ 0.99
SSU72-203ENST00000378725 DGKDQ16760 1214 aa21.26■□□□□ 0.99
SSU72-203ENST00000378725 GPR20Q99678 358 aa21.26■□□□□ 0.99
SSU72-203ENST00000378725 ZNF577Q9BSK1 485 aa21.26■□□□□ 0.99
SSU72-203ENST00000378725 PKD2L1Q9P0L9 805 aa21.26■□□□□ 0.99
SSU72-203ENST00000378725 DDX25Q9UHL0 483 aaKnown RBP21.26■□□□□ 0.99
SSU72-203ENST00000378725 SORBS3O60504 671 aa21.25■□□□□ 0.99
SSU72-203ENST00000378725 CCNT1O60563 726 aaKnown RBP21.25■□□□□ 0.99
SSU72-203ENST00000378725 SYT1P21579 422 aa21.25■□□□□ 0.99
SSU72-203ENST00000378725 CXCL17Q6UXB2 119 aa21.25■□□□□ 0.99
SSU72-203ENST00000378725 FERMT2Q96AC1 680 aa21.25■□□□□ 0.99
SSU72-203ENST00000378725 SDF4Q9BRK5 362 aa21.25■□□□□ 0.99
SSU72-203ENST00000378725 TBC1D22BQ9NU19 505 aa21.25■□□□□ 0.99
SSU72-203ENST00000378725 TELO2Q9Y4R8 837 aa21.25■□□□□ 0.99
SSU72-203ENST00000378725 ELP1O95163 1332 aa21.25■□□□□ 0.99
SSU72-203ENST00000378725 SLC37A4O43826 429 aa21.24■□□□□ 0.99
SSU72-203ENST00000378725 HSP90AA1P07900 732 aaKnown RBP21.24■□□□□ 0.99
SSU72-203ENST00000378725 MYL3P08590 195 aa21.24■□□□□ 0.99
SSU72-203ENST00000378725 TRAPPC10P48553 1259 aa21.24■□□□□ 0.99
SSU72-203ENST00000378725 MCTP1Q6DN14 999 aa21.24■□□□□ 0.99
SSU72-203ENST00000378725 SLC39A5Q6ZMH5 540 aa21.24■□□□□ 0.99
SSU72-203ENST00000378725 ETNPPLQ8TBG4 499 aa21.24■□□□□ 0.99
SSU72-203ENST00000378725 SLC5A5Q92911 643 aa21.24■□□□□ 0.99
SSU72-203ENST00000378725 GLT1D1Q96MS3 346 aa21.24■□□□□ 0.99
SSU72-203ENST00000378725 RIT2Q99578 217 aa21.24■□□□□ 0.99
SSU72-203ENST00000378725 JPH1Q9HDC5 661 aaPredicted RBP21.24■□□□□ 0.99
SSU72-203ENST00000378725 KCNMB3Q9NPA1 279 aa21.24■□□□□ 0.99
SSU72-203ENST00000378725 SLC9A2Q9UBY0 812 aa21.24■□□□□ 0.99
SSU72-203ENST00000378725 WNT7AO00755 349 aa21.23■□□□□ 0.99
SSU72-203ENST00000378725 TBX3O15119 743 aa21.23■□□□□ 0.99
SSU72-203ENST00000378725 ATG7O95352 703 aa21.23■□□□□ 0.99
SSU72-203ENST00000378725 BECN1Q14457 450 aa21.23■□□□□ 0.99
SSU72-203ENST00000378725 C1orf53Q5VUE5 145 aa21.23■□□□□ 0.99
SSU72-203ENST00000378725 SEPT1Q8WYJ6 367 aa21.23■□□□□ 0.99
SSU72-203ENST00000378725 MTG1Q9BT17 334 aaPredicted RBP21.23■□□□□ 0.99
SSU72-203ENST00000378725 GSTTP1A0A1W2PQM5 241 aa21.22■□□□□ 0.99
SSU72-203ENST00000378725 NOP56O00567 594 aaKnown RBP21.22■□□□□ 0.99
SSU72-203ENST00000378725 PDIA4P13667 645 aaKnown RBP21.22■□□□□ 0.99
SSU72-203ENST00000378725 TOB1P50616 345 aaPredicted RBP21.22■□□□□ 0.99
SSU72-203ENST00000378725 SNX17Q15036 470 aa21.22■□□□□ 0.99
SSU72-203ENST00000378725 KAT2BQ92831 832 aa21.22■□□□□ 0.99
SSU72-203ENST00000378725 FAM20AQ96MK3 541 aa21.22■□□□□ 0.99
SSU72-203ENST00000378725 UIMC1Q96RL1 719 aa21.22■□□□□ 0.99
SSU72-203ENST00000378725 C16orf70Q9BSU1 422 aa21.22■□□□□ 0.99
SSU72-203ENST00000378725 STARD7Q9NQZ5 370 aa21.22■□□□□ 0.99
SSU72-203ENST00000378725 PSMD10O75832 226 aa21.21■□□□□ 0.99
SSU72-203ENST00000378725 CCNE2O96020 404 aa21.21■□□□□ 0.99
SSU72-203ENST00000378725 ORC2Q13416 577 aaPredicted RBP21.21■□□□□ 0.99
SSU72-203ENST00000378725 SLC43A3Q8NBI5 491 aa21.21■□□□□ 0.99
SSU72-203ENST00000378725 HAS1Q92839 578 aa21.21■□□□□ 0.99
SSU72-203ENST00000378725 SEZ6LQ9BYH1 1024 aa21.21■□□□□ 0.99
SSU72-203ENST00000378725 NOL7Q9UMY1 257 aaKnown RBP21.21■□□□□ 0.99
SSU72-203ENST00000378725 MTMR6Q9Y217 621 aa21.21■□□□□ 0.99
SSU72-203ENST00000378725 GRIN2DO15399 1336 aa21.21■□□□□ 0.99
SSU72-203ENST00000378725 VPS37CA5D8V6 355 aaPredicted RBP21.2■□□□□ 0.98
SSU72-203ENST00000378725 STX6O43752 255 aa21.2■□□□□ 0.98
SSU72-203ENST00000378725 CDK7P50613 346 aa21.2■□□□□ 0.98
SSU72-203ENST00000378725 ACTR2P61160 394 aa21.2■□□□□ 0.98
SSU72-203ENST00000378725 SP4Q02446 784 aa21.2■□□□□ 0.98
SSU72-203ENST00000378725 LRRC26Q2I0M4 334 aa21.2■□□□□ 0.98
SSU72-203ENST00000378725 ZNF746Q6NUN9 644 aaPredicted RBP21.2■□□□□ 0.98
SSU72-203ENST00000378725 B3GNT9Q6UX72 402 aa21.2■□□□□ 0.98
SSU72-203ENST00000378725 POTEDQ86YR6 584 aa21.2■□□□□ 0.98
SSU72-203ENST00000378725 SPRYD3Q8NCJ5 442 aa21.2■□□□□ 0.98
SSU72-203ENST00000378725 VTI1AQ96AJ9 217 aa21.2■□□□□ 0.98
SSU72-203ENST00000378725 HTATIP2Q9BUP3 242 aa21.2■□□□□ 0.98
SSU72-203ENST00000378725 A0A0U1RQG5 324 aaPredicted RBP21.19■□□□□ 0.98
SSU72-203ENST00000378725 DDX39AO00148 427 aaKnown RBP21.19■□□□□ 0.98
SSU72-203ENST00000378725 HAS3O00219 553 aa21.19■□□□□ 0.98
SSU72-203ENST00000378725 GAS7O60861 476 aa21.19■□□□□ 0.98
SSU72-203ENST00000378725 F2P00734 622 aa21.19■□□□□ 0.98
SSU72-203ENST00000378725 LGALS2P05162 132 aa21.19■□□□□ 0.98
SSU72-203ENST00000378725 ATP2B1P20020 1258 aa21.19■□□□□ 0.98
SSU72-203ENST00000378725 TCF7P36402 384 aaPredicted RBP21.19■□□□□ 0.98
SSU72-203ENST00000378725 ATN1P54259 1190 aaPredicted RBP21.19■□□□□ 0.98
SSU72-203ENST00000378725 KRT76Q01546 638 aa21.19■□□□□ 0.98
SSU72-203ENST00000378725 ITGA7Q13683 1181 aa21.19■□□□□ 0.98
SSU72-203ENST00000378725 RILPL1Q5EBL4 403 aa21.19■□□□□ 0.98
SSU72-203ENST00000378725 TTC38Q5R3I4 469 aa21.19■□□□□ 0.98
SSU72-203ENST00000378725 LRCH2Q5VUJ6 765 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms