RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 C2orf54Q08AI8 447 aa12.28□□□□□ -0.44
RPGR-203ENST00000378505 GRM1Q13255 1194 aa12.28□□□□□ -0.44
RPGR-203ENST00000378505 CCDC125Q86Z20 511 aa12.28□□□□□ -0.44
RPGR-203ENST00000378505 LMNTD2Q8IXW0 634 aa12.28□□□□□ -0.44
RPGR-203ENST00000378505 CCDC13Q8IYE1 715 aa12.28□□□□□ -0.44
RPGR-203ENST00000378505 PROM2Q8N271 834 aa12.28□□□□□ -0.44
RPGR-203ENST00000378505 SLC7A3Q8WY07 619 aa12.28□□□□□ -0.44
RPGR-203ENST00000378505 QTRT2Q9H974 415 aaKnown RBP12.28□□□□□ -0.44
RPGR-203ENST00000378505 CD209Q9NNX6 404 aa12.28□□□□□ -0.44
RPGR-203ENST00000378505 ZNF609O15014 1411 aa12.28□□□□□ -0.44
RPGR-203ENST00000378505 STAM2O75886 525 aa12.28□□□□□ -0.44
RPGR-203ENST00000378505 TOGARAM2Q6ZUX3 1019 aa12.28□□□□□ -0.44
RPGR-203ENST00000378505 TMEM179Q6ZVK1 233 aa12.28□□□□□ -0.44
RPGR-203ENST00000378505 DHX40Q8IX18 779 aaKnown RBP12.28□□□□□ -0.44
RPGR-203ENST00000378505 MXD3Q9BW11 206 aa12.28□□□□□ -0.44
RPGR-203ENST00000378505 MXI1P50539 228 aa12.28□□□□□ -0.44
RPGR-203ENST00000378505 SARNPP82979 210 aaKnown RBP12.28□□□□□ -0.44
RPGR-203ENST00000378505 SDCCAG8Q86SQ7 713 aaPredicted RBP12.28□□□□□ -0.44
RPGR-203ENST00000378505 CDHR1Q96JP9 859 aa12.28□□□□□ -0.44
RPGR-203ENST00000378505 ABCB6Q9NP58 842 aa12.28□□□□□ -0.44
RPGR-203ENST00000378505 HESX1Q9UBX0 185 aa12.28□□□□□ -0.44
RPGR-203ENST00000378505 COL15A1P39059 1388 aa12.28□□□□□ -0.44
RPGR-203ENST00000378505 NPR1P16066 1061 aa12.27□□□□□ -0.44
RPGR-203ENST00000378505 GRM4Q14833 912 aa12.27□□□□□ -0.44
RPGR-203ENST00000378505 FAM160B2Q86V87 743 aa12.27□□□□□ -0.44
RPGR-203ENST00000378505 ZNF408Q9H9D4 720 aa12.27□□□□□ -0.44
RPGR-203ENST00000378505 KMT5AQ9NQR1 393 aa12.27□□□□□ -0.44
RPGR-203ENST00000378505 MYO3AQ8NEV4 1616 aa12.27□□□□□ -0.44
RPGR-203ENST00000378505 ZBTB5O15062 677 aa12.27□□□□□ -0.44
RPGR-203ENST00000378505 NMT2O60551 498 aa12.27□□□□□ -0.44
RPGR-203ENST00000378505 PIK3CAP42336 1068 aa12.27□□□□□ -0.44
RPGR-203ENST00000378505 SMC1BQ8NDV3 1235 aa12.27□□□□□ -0.44
RPGR-203ENST00000378505 HAUS1Q96CS2 278 aa12.27□□□□□ -0.44
RPGR-203ENST00000378505 BCS1LQ9Y276 419 aa12.27□□□□□ -0.44
RPGR-203ENST00000378505 TRIM49BA6NDI0 452 aa12.27□□□□□ -0.45
RPGR-203ENST00000378505 USP17L5A8MUK1 530 aa12.27□□□□□ -0.45
RPGR-203ENST00000378505 LIG3P49916 1009 aa12.27□□□□□ -0.45
RPGR-203ENST00000378505 IQCB1Q15051 598 aa12.27□□□□□ -0.45
RPGR-203ENST00000378505 TSNAXIP1Q2TAA8 658 aa12.27□□□□□ -0.45
RPGR-203ENST00000378505 FAM160B1Q5W0V3 765 aa12.27□□□□□ -0.45
RPGR-203ENST00000378505 ALS2CLQ60I27 953 aa12.27□□□□□ -0.45
RPGR-203ENST00000378505 EMBQ6PCB8 327 aa12.27□□□□□ -0.45
RPGR-203ENST00000378505 SLC44A5Q8NCS7 719 aa12.27□□□□□ -0.45
RPGR-203ENST00000378505 CEP170P1Q96L14 293 aa12.27□□□□□ -0.45
RPGR-203ENST00000378505 INTS9Q9NV88 658 aaKnown RBP12.27□□□□□ -0.45
RPGR-203ENST00000378505 ANKFY1Q9P2R3 1169 aa12.27□□□□□ -0.45
RPGR-203ENST00000378505 ADGRG1Q9Y653 693 aa12.27□□□□□ -0.45
RPGR-203ENST00000378505 PPRC1Q5VV67 1664 aaKnown RBP12.27□□□□□ -0.45
RPGR-203ENST00000378505 ANO9A1A5B4 782 aa12.27□□□□□ -0.45
RPGR-203ENST00000378505 PRR29P0C7W0 189 aa12.27□□□□□ -0.45
RPGR-203ENST00000378505 MAPK4P31152 587 aa12.27□□□□□ -0.45
RPGR-203ENST00000378505 ATP2C1P98194 919 aaPredicted RBP12.27□□□□□ -0.45
RPGR-203ENST00000378505 KRT81Q14533 505 aa12.27□□□□□ -0.45
RPGR-203ENST00000378505 WHAMMQ8TF30 809 aa12.27□□□□□ -0.45
RPGR-203ENST00000378505 FAM84BQ96KN1 310 aaPredicted RBP12.27□□□□□ -0.45
RPGR-203ENST00000378505 GPR101Q96P66 508 aaPredicted RBP12.27□□□□□ -0.45
RPGR-203ENST00000378505 USP14P54578 494 aa12.26□□□□□ -0.45
RPGR-203ENST00000378505 PLTPP55058 493 aa12.26□□□□□ -0.45
RPGR-203ENST00000378505 ALCAMQ13740 583 aa12.26□□□□□ -0.45
RPGR-203ENST00000378505 PPP1R2P3Q6NXS1 205 aa12.26□□□□□ -0.45
RPGR-203ENST00000378505 SCYL2Q6P3W7 929 aa12.26□□□□□ -0.45
RPGR-203ENST00000378505 HACE1Q8IYU2 909 aa12.26□□□□□ -0.45
RPGR-203ENST00000378505 CPVLQ9H3G5 476 aa12.26□□□□□ -0.45
RPGR-203ENST00000378505 PCIF1Q9H4Z3 704 aa12.26□□□□□ -0.45
RPGR-203ENST00000378505 BARHL2Q9NY43 387 aa12.26□□□□□ -0.45
RPGR-203ENST00000378505 SEPT9Q9UHD8 586 aaPredicted RBP12.26□□□□□ -0.45
RPGR-203ENST00000378505 UTYO14607 1347 aa12.26□□□□□ -0.45
RPGR-203ENST00000378505 MRPS9P82933 396 aaKnown RBP12.26□□□□□ -0.45
RPGR-203ENST00000378505 PPP2R5DQ14738 602 aa12.26□□□□□ -0.45
RPGR-203ENST00000378505 GEN1Q17RS7 908 aa12.26□□□□□ -0.45
RPGR-203ENST00000378505 POTEMA6NI47 508 aa12.26□□□□□ -0.45
RPGR-203ENST00000378505 ABCD1P33897 745 aa12.26□□□□□ -0.45
RPGR-203ENST00000378505 TXNRD1Q16881 649 aa12.26□□□□□ -0.45
RPGR-203ENST00000378505 DCAF4Q8WV16 495 aa12.26□□□□□ -0.45
RPGR-203ENST00000378505 TBC1D31Q96DN5 1066 aa12.26□□□□□ -0.45
RPGR-203ENST00000378505 UBE2TQ9NPD8 197 aaPredicted RBP12.26□□□□□ -0.45
RPGR-203ENST00000378505 ATP8A1Q9Y2Q0 1164 aa12.26□□□□□ -0.45
RPGR-203ENST00000378505 PCDHB4Q9Y5E5 795 aa12.26□□□□□ -0.45
RPGR-203ENST00000378505 TEX33O43247 280 aa12.26□□□□□ -0.45
RPGR-203ENST00000378505 TMOD1P28289 359 aa12.26□□□□□ -0.45
RPGR-203ENST00000378505 DHX9Q08211 1270 aaKnown RBP12.26□□□□□ -0.45
RPGR-203ENST00000378505 CEP95Q96GE4 821 aa12.26□□□□□ -0.45
RPGR-203ENST00000378505 MMS19Q96T76 1030 aa12.26□□□□□ -0.45
RPGR-203ENST00000378505 JPH2Q9BR39 696 aaPredicted RBP12.26□□□□□ -0.45
RPGR-203ENST00000378505 SORBS3O60504 671 aa12.25□□□□□ -0.45
RPGR-203ENST00000378505 CA8P35219 290 aa12.25□□□□□ -0.45
RPGR-203ENST00000378505 CCDC117Q8IWD4 279 aaPredicted RBP12.25□□□□□ -0.45
RPGR-203ENST00000378505 AFAP1L2Q8N4X5 818 aa12.25□□□□□ -0.45
RPGR-203ENST00000378505 ODF2LQ9ULJ1 636 aa12.25□□□□□ -0.45
RPGR-203ENST00000378505 CSF1RP07333 972 aa12.25□□□□□ -0.45
RPGR-203ENST00000378505 BSPRYQ5W0U4 402 aa12.25□□□□□ -0.45
RPGR-203ENST00000378505 PPP1R18Q6NYC8 613 aa12.25□□□□□ -0.45
RPGR-203ENST00000378505 METTL16Q86W50 562 aaKnown RBP12.25□□□□□ -0.45
RPGR-203ENST00000378505 NEDD1Q8NHV4 660 aa12.25□□□□□ -0.45
RPGR-203ENST00000378505 IGDCC4Q8TDY8 1250 aa12.25□□□□□ -0.45
RPGR-203ENST00000378505 ZNF512BQ96KM6 892 aaPredicted RBP12.25□□□□□ -0.45
RPGR-203ENST00000378505 IL25Q9H293 177 aa12.25□□□□□ -0.45
RPGR-203ENST00000378505 CEP72Q9P209 647 aa12.25□□□□□ -0.45
RPGR-203ENST00000378505 FBXO2Q9UK22 296 aaPredicted RBP12.25□□□□□ -0.45
RPGR-203ENST00000378505 CPS1P31327 1500 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms