RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 NCBP1Q09161 790 aaKnown RBP9.11□□□□□ -0.95
UBR4-202ENST00000375224 RRP1BQ14684 758 aaKnown RBP9.11□□□□□ -0.95
UBR4-202ENST00000375224 ZKSCAN8Q15776 578 aaPredicted RBP9.11□□□□□ -0.95
UBR4-202ENST00000375224 CIAPIN1Q6FI81 312 aa9.11□□□□□ -0.95
UBR4-202ENST00000375224 TOGARAM2Q6ZUX3 1019 aa9.11□□□□□ -0.95
UBR4-202ENST00000375224 OR8K1Q8NGG5 319 aa9.11□□□□□ -0.95
UBR4-202ENST00000375224 NUDT12Q9BQG2 462 aa9.11□□□□□ -0.95
UBR4-202ENST00000375224 VCPKMTQ9H867 229 aa9.11□□□□□ -0.95
UBR4-202ENST00000375224 FEM1BQ9UK73 627 aa9.11□□□□□ -0.95
UBR4-202ENST00000375224 ASNSP08243 561 aa9.1□□□□□ -0.95
UBR4-202ENST00000375224 JAG1P78504 1218 aa9.1□□□□□ -0.95
UBR4-202ENST00000375224 TBC1D8BQ0IIM8 1120 aa9.1□□□□□ -0.95
UBR4-202ENST00000375224 PRR16Q569H4 304 aa9.1□□□□□ -0.95
UBR4-202ENST00000375224 MYOCDQ8IZQ8 938 aa9.1□□□□□ -0.95
UBR4-202ENST00000375224 OTUD6BQ8N6M0 293 aa9.1□□□□□ -0.95
UBR4-202ENST00000375224 ZNF397Q8NF99 534 aaPredicted RBP9.1□□□□□ -0.95
UBR4-202ENST00000375224 NOC4LQ9BVI4 516 aaKnown RBP9.1□□□□□ -0.95
UBR4-202ENST00000375224 CAPN11Q9UMQ6 739 aa9.1□□□□□ -0.95
UBR4-202ENST00000375224 KIAA1024Q9UPX6 916 aa9.1□□□□□ -0.95
UBR4-202ENST00000375224 ADGRG1Q9Y653 693 aa9.1□□□□□ -0.95
UBR4-202ENST00000375224 PITPNM2Q9BZ72 1349 aa9.1□□□□□ -0.95
UBR4-202ENST00000375224 SOWAHDA6NJG2 315 aa9.1□□□□□ -0.95
UBR4-202ENST00000375224 PLA2G4BP0C869 781 aa9.1□□□□□ -0.95
UBR4-202ENST00000375224 CAP2P40123 477 aa9.1□□□□□ -0.95
UBR4-202ENST00000375224 MAP3K10Q02779 954 aa9.1□□□□□ -0.95
UBR4-202ENST00000375224 EHHADHQ08426 723 aa9.1□□□□□ -0.95
UBR4-202ENST00000375224 TNFAIP1Q13829 316 aa9.1□□□□□ -0.95
UBR4-202ENST00000375224 DALRD3Q5D0E6 543 aaKnown RBP9.1□□□□□ -0.95
UBR4-202ENST00000375224 ETNPPLQ8TBG4 499 aa9.1□□□□□ -0.95
UBR4-202ENST00000375224 ZBED3Q96IU2 234 aaPredicted RBP9.1□□□□□ -0.95
UBR4-202ENST00000375224 RANBP17Q9H2T7 1088 aaKnown RBP9.1□□□□□ -0.95
UBR4-202ENST00000375224 PRDM16Q9HAZ2 1276 aa9.1□□□□□ -0.95
UBR4-202ENST00000375224 PANK4Q9NVE7 773 aa9.1□□□□□ -0.95
UBR4-202ENST00000375224 ZNHIT6Q9NWK9 470 aaKnown RBP9.1□□□□□ -0.95
UBR4-202ENST00000375224 GCOM1H8Y6P7 765 aaPredicted RBP9.1□□□□□ -0.95
UBR4-202ENST00000375224 POLR2MP0CAP2 368 aa9.1□□□□□ -0.95
UBR4-202ENST00000375224 POLD1P28340 1107 aa9.1□□□□□ -0.95
UBR4-202ENST00000375224 GNG11P61952 73 aa9.1□□□□□ -0.95
UBR4-202ENST00000375224 FIGNQ5HY92 759 aa9.1□□□□□ -0.95
UBR4-202ENST00000375224 FAM26FQ5R3K3 315 aa9.1□□□□□ -0.95
UBR4-202ENST00000375224 SPICE1Q8N0Z3 855 aa9.1□□□□□ -0.95
UBR4-202ENST00000375224 DNAJC19Q96DA6 116 aa9.1□□□□□ -0.95
UBR4-202ENST00000375224 SEMA6BQ9H3T3 888 aa9.1□□□□□ -0.95
UBR4-202ENST00000375224 DNM3Q9UQ16 869 aa9.1□□□□□ -0.95
UBR4-202ENST00000375224 RABGAP1Q9Y3P9 1069 aa9.1□□□□□ -0.95
UBR4-202ENST00000375224 KIF5CO60282 957 aa9.09□□□□□ -0.95
UBR4-202ENST00000375224 SSBP05455 408 aaKnown RBP eCLIP9.09□□□□□ -0.95
UBR4-202ENST00000375224 KRT18P05783 430 aaKnown RBP9.09□□□□□ -0.95
UBR4-202ENST00000375224 RPS12P25398 132 aaKnown RBP9.09□□□□□ -0.95
UBR4-202ENST00000375224 RPA1P27694 616 aa9.09□□□□□ -0.95
UBR4-202ENST00000375224 ECE1P42892 770 aa9.09□□□□□ -0.95
UBR4-202ENST00000375224 CXCL9Q07325 125 aa9.09□□□□□ -0.95
UBR4-202ENST00000375224 COASYQ13057 564 aa9.09□□□□□ -0.95
UBR4-202ENST00000375224 TUBB2AQ13885 445 aa9.09□□□□□ -0.95
UBR4-202ENST00000375224 BMS1Q14692 1282 aaKnown RBP9.09□□□□□ -0.95
UBR4-202ENST00000375224 FAM83BQ5T0W9 1011 aa9.09□□□□□ -0.95
UBR4-202ENST00000375224 RAD9BQ6WBX8 426 aa9.09□□□□□ -0.95
UBR4-202ENST00000375224 KCNK18Q7Z418 384 aa9.09□□□□□ -0.95
UBR4-202ENST00000375224 ACER1Q8TDN7 264 aa9.09□□□□□ -0.95
UBR4-202ENST00000375224 ERGIC2Q96RQ1 377 aa9.09□□□□□ -0.95
UBR4-202ENST00000375224 TUBB2BQ9BVA1 445 aa9.09□□□□□ -0.95
UBR4-202ENST00000375224 PDGFDQ9GZP0 370 aaPredicted RBP9.09□□□□□ -0.95
UBR4-202ENST00000375224 TAOK3Q9H2K8 898 aa9.09□□□□□ -0.95
UBR4-202ENST00000375224 ZNF215Q9UL58 517 aaPredicted RBP9.09□□□□□ -0.95
UBR4-202ENST00000375224 GNA14O95837 355 aa9.09□□□□□ -0.95
UBR4-202ENST00000375224 SNAP25P60880 206 aa9.09□□□□□ -0.95
UBR4-202ENST00000375224 ECM1Q16610 540 aa9.09□□□□□ -0.95
UBR4-202ENST00000375224 MAN2A1Q16706 1144 aa9.09□□□□□ -0.95
UBR4-202ENST00000375224 CCDC84Q86UT8 332 aaPredicted RBP9.09□□□□□ -0.95
UBR4-202ENST00000375224 GPBP1Q86WP2 473 aa9.09□□□□□ -0.95
UBR4-202ENST00000375224 DNAJC7Q99615 494 aa9.09□□□□□ -0.95
UBR4-202ENST00000375224 MYO1AQ9UBC5 1043 aa9.09□□□□□ -0.95
UBR4-202ENST00000375224 A0A1W2PQJ5 194 aa9.08□□□□□ -0.96
UBR4-202ENST00000375224 B4DLN1 442 aa9.08□□□□□ -0.96
UBR4-202ENST00000375224 URI1O94763 535 aaPredicted RBP9.08□□□□□ -0.96
UBR4-202ENST00000375224 TRIM21P19474 475 aaKnown RBP9.08□□□□□ -0.96
UBR4-202ENST00000375224 DEFB132Q7Z7B7 95 aa9.08□□□□□ -0.96
UBR4-202ENST00000375224 PCMTD1Q96MG8 357 aaPredicted RBP9.08□□□□□ -0.96
UBR4-202ENST00000375224 POLR3CQ9BUI4 534 aaPredicted RBP9.08□□□□□ -0.96
UBR4-202ENST00000375224 TMEM39BQ9GZU3 492 aa9.08□□□□□ -0.96
UBR4-202ENST00000375224 MYOZ2Q9NPC6 264 aa9.08□□□□□ -0.96
UBR4-202ENST00000375224 TTC26A0AVF1 554 aa9.08□□□□□ -0.96
UBR4-202ENST00000375224 POTEB3A0JP26 581 aa9.08□□□□□ -0.96
UBR4-202ENST00000375224 POTECB2RU33 542 aa9.08□□□□□ -0.96
UBR4-202ENST00000375224 E9PMD0 336 aa9.08□□□□□ -0.96
UBR4-202ENST00000375224 KIF3CO14782 793 aa9.08□□□□□ -0.96
UBR4-202ENST00000375224 ZBED6P86452 979 aa9.08□□□□□ -0.96
UBR4-202ENST00000375224 FKBP3Q00688 224 aaKnown RBP9.08□□□□□ -0.96
UBR4-202ENST00000375224 VWA3BQ502W6 1294 aa9.08□□□□□ -0.96
UBR4-202ENST00000375224 ARHGAP29Q52LW3 1261 aa9.08□□□□□ -0.96
UBR4-202ENST00000375224 MUM1L1Q5H9M0 696 aa9.08□□□□□ -0.96
UBR4-202ENST00000375224 NCAPH2Q6IBW4 605 aa9.08□□□□□ -0.96
UBR4-202ENST00000375224 POTEBQ6S5H4 581 aa9.08□□□□□ -0.96
UBR4-202ENST00000375224 PPP4R3CPQ6ZMV5 832 aa9.08□□□□□ -0.96
UBR4-202ENST00000375224 KIFC2Q96AC6 838 aa9.08□□□□□ -0.96
UBR4-202ENST00000375224 CEP63Q96MT8 703 aa9.08□□□□□ -0.96
UBR4-202ENST00000375224 DESI2Q9BSY9 194 aa9.08□□□□□ -0.96
UBR4-202ENST00000375224 PNMA2Q9UL42 364 aa9.08□□□□□ -0.96
UBR4-202ENST00000375224 WNT10BO00744 389 aa9.08□□□□□ -0.96
UBR4-202ENST00000375224 MUTP22033 750 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms