RNA–Protein interactions for RNA: ENST00000374043.6

PACSIN1-202, Transcript of protein kinase C and casein kinase substrate in neurons 1, humanhuman

TSL 1 (best) BASIC

Gene PACSIN1, Length 4,229 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1-202ENST00000374043 RIC8AQ9NPQ8 531 aa12.99□□□□□ -0.33
PACSIN1-202ENST00000374043 PCDHA13Q9Y5I0 950 aa12.99□□□□□ -0.33
PACSIN1-202ENST00000374043 GFPT2O94808 682 aa12.98□□□□□ -0.33
PACSIN1-202ENST00000374043 TTLL6Q8N841 843 aa12.98□□□□□ -0.33
PACSIN1-202ENST00000374043 TSGA10Q9BZW7 698 aa12.98□□□□□ -0.33
PACSIN1-202ENST00000374043 HYOU1Q9Y4L1 999 aa12.98□□□□□ -0.33
PACSIN1-202ENST00000374043 RNF225M0QZC1 329 aaPredicted RBP12.98□□□□□ -0.33
PACSIN1-202ENST00000374043 GCFC2P16383 781 aaKnown RBP12.98□□□□□ -0.33
PACSIN1-202ENST00000374043 MCM3P25205 808 aa12.98□□□□□ -0.33
PACSIN1-202ENST00000374043 WHAMMP3Q1A5X7 153 aa12.98□□□□□ -0.33
PACSIN1-202ENST00000374043 XKR9Q5GH70 373 aa12.98□□□□□ -0.33
PACSIN1-202ENST00000374043 CERKQ8TCT0 537 aa12.98□□□□□ -0.33
PACSIN1-202ENST00000374043 HOOK2Q96ED9 719 aa12.98□□□□□ -0.33
PACSIN1-202ENST00000374043 DYDC2Q96IM9 177 aa12.98□□□□□ -0.33
PACSIN1-202ENST00000374043 HSD3B7Q9H2F3 369 aa12.98□□□□□ -0.33
PACSIN1-202ENST00000374043 ABCB11O95342 1321 aa12.98□□□□□ -0.33
PACSIN1-202ENST00000374043 TRAF1Q13077 416 aa12.98□□□□□ -0.33
PACSIN1-202ENST00000374043 BIRC3Q13489 604 aa12.98□□□□□ -0.33
PACSIN1-202ENST00000374043 SUPT20HQ8NEM7 779 aa12.98□□□□□ -0.33
PACSIN1-202ENST00000374043 SH2D4AQ9H788 454 aa12.98□□□□□ -0.33
PACSIN1-202ENST00000374043 MAGEF1Q9HAY2 307 aa12.98□□□□□ -0.33
PACSIN1-202ENST00000374043 RAVER2Q9HCJ3 691 aaKnown RBP12.98□□□□□ -0.33
PACSIN1-202ENST00000374043 MRFAP1Q9Y605 127 aa12.98□□□□□ -0.33
PACSIN1-202ENST00000374043 HSF2BPO75031 334 aa12.97□□□□□ -0.33
PACSIN1-202ENST00000374043 DLATP10515 647 aaKnown RBP12.97□□□□□ -0.33
PACSIN1-202ENST00000374043 TRIM58Q8NG06 486 aa12.97□□□□□ -0.33
PACSIN1-202ENST00000374043 GOLPH3Q9H4A6 298 aa12.97□□□□□ -0.33
PACSIN1-202ENST00000374043 PICK1Q9NRD5 415 aa12.97□□□□□ -0.33
PACSIN1-202ENST00000374043 MRPL11Q9Y3B7 192 aaKnown RBP12.97□□□□□ -0.33
PACSIN1-202ENST00000374043 NMT1P30419 496 aaKnown RBP12.97□□□□□ -0.33
PACSIN1-202ENST00000374043 SHMT1P34896 483 aa12.97□□□□□ -0.33
PACSIN1-202ENST00000374043 VAV2P52735 878 aa12.97□□□□□ -0.33
PACSIN1-202ENST00000374043 NFRKBQ6P4R8 1299 aa12.97□□□□□ -0.33
PACSIN1-202ENST00000374043 EEPD1Q7L9B9 569 aa12.97□□□□□ -0.33
PACSIN1-202ENST00000374043 DEFB132Q7Z7B7 95 aa12.97□□□□□ -0.33
PACSIN1-202ENST00000374043 NOA1Q8NC60 698 aaKnown RBP12.97□□□□□ -0.33
PACSIN1-202ENST00000374043 MED15Q96RN5 788 aa12.97□□□□□ -0.33
PACSIN1-202ENST00000374043 EHD2Q9NZN4 543 aa12.97□□□□□ -0.33
PACSIN1-202ENST00000374043 ERLIN2O94905 339 aa12.97□□□□□ -0.33
PACSIN1-202ENST00000374043 HPDP32754 393 aaPredicted RBP12.97□□□□□ -0.33
PACSIN1-202ENST00000374043 E2F4Q16254 413 aa12.97□□□□□ -0.33
PACSIN1-202ENST00000374043 NAALADL2Q58DX5 795 aa12.97□□□□□ -0.33
PACSIN1-202ENST00000374043 CCDC25Q86WR0 208 aa12.97□□□□□ -0.33
PACSIN1-202ENST00000374043 ATRNO75882 1429 aa12.97□□□□□ -0.33
PACSIN1-202ENST00000374043 RSPH10B2B2RC85 870 aa12.96□□□□□ -0.33
PACSIN1-202ENST00000374043 ATP2C2O75185 946 aa12.96□□□□□ -0.33
PACSIN1-202ENST00000374043 RSPH10BP0C881 870 aa12.96□□□□□ -0.33
PACSIN1-202ENST00000374043 IL1R1P14778 569 aa12.96□□□□□ -0.33
PACSIN1-202ENST00000374043 KCNH2Q12809 1159 aa12.96□□□□□ -0.33
PACSIN1-202ENST00000374043 RPS6KA1Q15418 735 aa12.96□□□□□ -0.33
PACSIN1-202ENST00000374043 NPY5RQ15761 445 aa12.96□□□□□ -0.33
PACSIN1-202ENST00000374043 PEX26Q7Z412 305 aa12.96□□□□□ -0.33
PACSIN1-202ENST00000374043 SCN11AQ9UI33 1791 aa12.96□□□□□ -0.33
PACSIN1-202ENST00000374043 COL1A1P02452 1464 aaPredicted RBP12.96□□□□□ -0.33
PACSIN1-202ENST00000374043 FOSP01100 380 aaPredicted RBP12.96□□□□□ -0.33
PACSIN1-202ENST00000374043 MYL1P05976 194 aa12.96□□□□□ -0.33
PACSIN1-202ENST00000374043 TRIM49P0CI25 452 aa12.96□□□□□ -0.33
PACSIN1-202ENST00000374043 TRIM49CP0CI26 452 aa12.96□□□□□ -0.33
PACSIN1-202ENST00000374043 CDKAL1Q5VV42 579 aa12.96□□□□□ -0.33
PACSIN1-202ENST00000374043 TRIM65Q6PJ69 517 aa12.96□□□□□ -0.33
PACSIN1-202ENST00000374043 DAAM2Q86T65 1068 aa12.96□□□□□ -0.33
PACSIN1-202ENST00000374043 LACRTQ9GZZ8 138 aa12.96□□□□□ -0.33
PACSIN1-202ENST00000374043 SEMA6BQ9H3T3 888 aa12.96□□□□□ -0.33
PACSIN1-202ENST00000374043 GCNT4Q9P109 453 aa12.96□□□□□ -0.33
PACSIN1-202ENST00000374043 CTTNBP2NLQ9P2B4 639 aa12.96□□□□□ -0.33
PACSIN1-202ENST00000374043 ESYT3A0FGR9 886 aa12.96□□□□□ -0.34
PACSIN1-202ENST00000374043 MYCNP04198 464 aaPredicted RBP12.96□□□□□ -0.34
PACSIN1-202ENST00000374043 POLD1P28340 1107 aa12.96□□□□□ -0.34
PACSIN1-202ENST00000374043 PRPHP41219 470 aa12.96□□□□□ -0.34
PACSIN1-202ENST00000374043 KCNB1Q14721 858 aa12.96□□□□□ -0.34
PACSIN1-202ENST00000374043 EZH2Q15910 746 aaKnown RBP12.96□□□□□ -0.34
PACSIN1-202ENST00000374043 ARHGEF16Q5VV41 709 aa12.96□□□□□ -0.34
PACSIN1-202ENST00000374043 KCTD16Q68DU8 428 aa12.96□□□□□ -0.34
PACSIN1-202ENST00000374043 CC2D1AQ6P1N0 951 aaPredicted RBP12.96□□□□□ -0.34
PACSIN1-202ENST00000374043 GBP6Q6ZN66 633 aa12.96□□□□□ -0.34
PACSIN1-202ENST00000374043 FAM186BQ8IYM0 893 aa12.96□□□□□ -0.34
PACSIN1-202ENST00000374043 PPM1KQ8N3J5 372 aa12.96□□□□□ -0.34
PACSIN1-202ENST00000374043 KBTBD4Q9NVX7 518 aa12.96□□□□□ -0.34
PACSIN1-202ENST00000374043 ZC2HC1CQ53FD0 456 aaPredicted RBP12.96□□□□□ -0.34
PACSIN1-202ENST00000374043 APOBEC3HQ6NTF7 200 aaKnown RBP12.96□□□□□ -0.34
PACSIN1-202ENST00000374043 SELENOOQ9BVL4 669 aa12.96□□□□□ -0.34
PACSIN1-202ENST00000374043 FAN1Q9Y2M0 1017 aa12.96□□□□□ -0.34
PACSIN1-202ENST00000374043 SPATA31A6Q5VVP1 1343 aa12.95□□□□□ -0.34
PACSIN1-202ENST00000374043 ARFGEF2Q9Y6D5 1785 aa12.95□□□□□ -0.34
PACSIN1-202ENST00000374043 STAT1P42224 750 aa12.95□□□□□ -0.34
PACSIN1-202ENST00000374043 PSMC6P62333 389 aa12.95□□□□□ -0.34
PACSIN1-202ENST00000374043 GUCY2DQ02846 1103 aa12.95□□□□□ -0.34
PACSIN1-202ENST00000374043 TTI2Q6NXR4 508 aa12.95□□□□□ -0.34
PACSIN1-202ENST00000374043 UHMK1Q8TAS1 419 aaKnown RBP12.95□□□□□ -0.34
PACSIN1-202ENST00000374043 KRT12Q99456 494 aa12.95□□□□□ -0.34
PACSIN1-202ENST00000374043 PAGR1Q9BTK6 254 aa12.95□□□□□ -0.34
PACSIN1-202ENST00000374043 TEKT3Q9BXF9 490 aa12.95□□□□□ -0.34
PACSIN1-202ENST00000374043 PRR12Q9ULL5 1215 aa12.95□□□□□ -0.34
PACSIN1-202ENST00000374043 GINS2Q9Y248 185 aa12.95□□□□□ -0.34
PACSIN1-202ENST00000374043 VSNL1P62760 191 aa12.95□□□□□ -0.34
PACSIN1-202ENST00000374043 MAP3K9P80192 1104 aa12.95□□□□□ -0.34
PACSIN1-202ENST00000374043 STRIP1Q5VSL9 837 aa12.95□□□□□ -0.34
PACSIN1-202ENST00000374043 MMS19Q96T76 1030 aa12.95□□□□□ -0.34
PACSIN1-202ENST00000374043 MYBP10242 640 aa12.95□□□□□ -0.34
PACSIN1-202ENST00000374043 LRRC63Q05C16 580 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms