RNA–Protein interactions for RNA: ENST00000373388.6

CSMD2-206, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSMD2, Length 13,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-206ENST00000373388 TRIM49CP0CI26 452 aa7.56□□□□□ -1.2
CSMD2-206ENST00000373388 TRIM71Q2Q1W2 868 aaKnown RBP7.56□□□□□ -1.2
CSMD2-206ENST00000373388 ARMCX4Q5H9R4 360 aa7.56□□□□□ -1.2
CSMD2-206ENST00000373388 ACAD11Q709F0 780 aa7.56□□□□□ -1.2
CSMD2-206ENST00000373388 MRRFQ96E11 262 aaKnown RBP7.56□□□□□ -1.2
CSMD2-206ENST00000373388 USP28Q96RU2 1077 aa7.56□□□□□ -1.2
CSMD2-206ENST00000373388 SH3GLB1Q9Y371 365 aa7.56□□□□□ -1.2
CSMD2-206ENST00000373388 BNC1Q01954 994 aa7.56□□□□□ -1.2
CSMD2-206ENST00000373388 HIC1Q14526 733 aa7.56□□□□□ -1.2
CSMD2-206ENST00000373388 POLR2DO15514 142 aaKnown RBP7.56□□□□□ -1.2
CSMD2-206ENST00000373388 PASD1Q8IV76 773 aa7.56□□□□□ -1.2
CSMD2-206ENST00000373388 SBNO1A3KN83 1393 aa7.56□□□□□ -1.2
CSMD2-206ENST00000373388 CDK13Q14004 1512 aaKnown RBP7.56□□□□□ -1.2
CSMD2-206ENST00000373388 TBC1D4O60343 1298 aa7.56□□□□□ -1.2
CSMD2-206ENST00000373388 PTK2BQ14289 1009 aa7.56□□□□□ -1.2
CSMD2-206ENST00000373388 BTBD6Q96KE9 485 aa7.56□□□□□ -1.2
CSMD2-206ENST00000373388 CSRNP1Q96S65 589 aa7.56□□□□□ -1.2
CSMD2-206ENST00000373388 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.56□□□□□ -1.2
CSMD2-206ENST00000373388 SOS2Q07890 1332 aaPredicted RBP7.56□□□□□ -1.2
CSMD2-206ENST00000373388 DNALI1O14645 258 aaPredicted RBP7.56□□□□□ -1.2
CSMD2-206ENST00000373388 IFNB1P01574 187 aa7.56□□□□□ -1.2
CSMD2-206ENST00000373388 SRGAP2BP0DMP2 458 aa7.56□□□□□ -1.2
CSMD2-206ENST00000373388 SARM1Q6SZW1 724 aa7.56□□□□□ -1.2
CSMD2-206ENST00000373388 GPR141Q7Z602 305 aa7.56□□□□□ -1.2
CSMD2-206ENST00000373388 ARHGEF25Q86VW2 580 aa7.56□□□□□ -1.2
CSMD2-206ENST00000373388 PARD3BQ8TEW8 1205 aa7.56□□□□□ -1.2
CSMD2-206ENST00000373388 HDAC11Q96DB2 347 aa7.56□□□□□ -1.2
CSMD2-206ENST00000373388 LSG1Q9H089 658 aaKnown RBP7.56□□□□□ -1.2
CSMD2-206ENST00000373388 RGS9BPQ6ZS82 235 aa7.56□□□□□ -1.2
CSMD2-206ENST00000373388 PROSER2Q86WR7 435 aaPredicted RBP7.56□□□□□ -1.2
CSMD2-206ENST00000373388 SUN2Q9UH99 717 aa7.56□□□□□ -1.2
CSMD2-206ENST00000373388 NPR1P16066 1061 aa7.56□□□□□ -1.2
CSMD2-206ENST00000373388 IFNA8P32881 189 aa7.56□□□□□ -1.2
CSMD2-206ENST00000373388 KRT72Q14CN4 511 aa7.56□□□□□ -1.2
CSMD2-206ENST00000373388 ZNF354CQ86Y25 554 aa7.56□□□□□ -1.2
CSMD2-206ENST00000373388 ZFYVE19Q96K21 471 aa7.56□□□□□ -1.2
CSMD2-206ENST00000373388 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.56□□□□□ -1.2
CSMD2-206ENST00000373388 VWA3AA6NCI4 1184 aa7.56□□□□□ -1.2
CSMD2-206ENST00000373388 VWA5AO00534 786 aa7.56□□□□□ -1.2
CSMD2-206ENST00000373388 SUPT3HO75486 399 aa7.56□□□□□ -1.2
CSMD2-206ENST00000373388 RINT1Q6NUQ1 792 aa7.56□□□□□ -1.2
CSMD2-206ENST00000373388 NME9Q86XW9 330 aa7.56□□□□□ -1.2
CSMD2-206ENST00000373388 SPDYE1Q8NFV5 336 aaPredicted RBP7.56□□□□□ -1.2
CSMD2-206ENST00000373388 UBA2Q9UBT2 640 aaPredicted RBP7.56□□□□□ -1.2
CSMD2-206ENST00000373388 PYCARDQ9ULZ3 195 aa7.56□□□□□ -1.2
CSMD2-206ENST00000373388 KRT38O76015 456 aa7.55□□□□□ -1.2
CSMD2-206ENST00000373388 IL12RB1P42701 662 aa7.55□□□□□ -1.2
CSMD2-206ENST00000373388 INPP5AQ14642 412 aa7.55□□□□□ -1.2
CSMD2-206ENST00000373388 RUNDC3AQ59EK9 446 aa7.55□□□□□ -1.2
CSMD2-206ENST00000373388 ARMC3Q5W041 872 aa7.55□□□□□ -1.2
CSMD2-206ENST00000373388 NOSTRINQ8IVI9 506 aa7.55□□□□□ -1.2
CSMD2-206ENST00000373388 MICALL2Q8IY33 904 aa7.55□□□□□ -1.2
CSMD2-206ENST00000373388 ASPSCR1Q9BZE9 553 aa7.55□□□□□ -1.2
CSMD2-206ENST00000373388 TRPV6Q9H1D0 765 aa7.55□□□□□ -1.2
CSMD2-206ENST00000373388 TAF4O00268 1085 aa7.55□□□□□ -1.2
CSMD2-206ENST00000373388 WAPLQ7Z5K2 1190 aa7.55□□□□□ -1.2
CSMD2-206ENST00000373388 CCDC117Q8IWD4 279 aaPredicted RBP7.55□□□□□ -1.2
CSMD2-206ENST00000373388 SEPT1Q8WYJ6 367 aa7.55□□□□□ -1.2
CSMD2-206ENST00000373388 PBXIP1Q96AQ6 731 aa7.55□□□□□ -1.2
CSMD2-206ENST00000373388 TRIM39Q9HCM9 518 aa7.55□□□□□ -1.2
CSMD2-206ENST00000373388 CTIFO43310 598 aaKnown RBP7.55□□□□□ -1.2
CSMD2-206ENST00000373388 HLA-DPA1P20036 260 aa7.55□□□□□ -1.2
CSMD2-206ENST00000373388 VCPP55072 806 aaKnown RBP7.55□□□□□ -1.2
CSMD2-206ENST00000373388 SCRN3Q0VDG4 424 aa7.55□□□□□ -1.2
CSMD2-206ENST00000373388 MPRIPQ6WCQ1 1025 aa7.55□□□□□ -1.2
CSMD2-206ENST00000373388 SLC35F6Q8N357 371 aa7.55□□□□□ -1.2
CSMD2-206ENST00000373388 DBF4Q9UBU7 674 aaPredicted RBP7.55□□□□□ -1.2
CSMD2-206ENST00000373388 PRG4Q92954 1404 aaPredicted RBP7.55□□□□□ -1.2
CSMD2-206ENST00000373388 HMOX2P30519 316 aa7.55□□□□□ -1.2
CSMD2-206ENST00000373388 RGS2P41220 211 aa7.55□□□□□ -1.2
CSMD2-206ENST00000373388 R3HDM1Q15032 1099 aaKnown RBP7.55□□□□□ -1.2
CSMD2-206ENST00000373388 BEND3Q5T5X7 828 aa7.55□□□□□ -1.2
CSMD2-206ENST00000373388 EPM2AIP1Q7L775 607 aaPredicted RBP7.55□□□□□ -1.2
CSMD2-206ENST00000373388 KLC2Q9H0B6 622 aa7.55□□□□□ -1.2
CSMD2-206ENST00000373388 BHMT2Q9H2M3 363 aa7.55□□□□□ -1.2
CSMD2-206ENST00000373388 TRIM45Q9H8W5 580 aaPredicted RBP7.55□□□□□ -1.2
CSMD2-206ENST00000373388 NAPAP54920 295 aa7.55□□□□□ -1.2
CSMD2-206ENST00000373388 DR1Q01658 176 aa7.55□□□□□ -1.2
CSMD2-206ENST00000373388 PPP4R4Q6NUP7 873 aa7.55□□□□□ -1.2
CSMD2-206ENST00000373388 CCT8L2Q96SF2 557 aa7.55□□□□□ -1.2
CSMD2-206ENST00000373388 TAB2Q9NYJ8 693 aa7.55□□□□□ -1.2
CSMD2-206ENST00000373388 SAC3D1A6NKF1 404 aa7.55□□□□□ -1.2
CSMD2-206ENST00000373388 CHEK2O96017 543 aa7.55□□□□□ -1.2
CSMD2-206ENST00000373388 TRPM8Q7Z2W7 1104 aa7.55□□□□□ -1.2
CSMD2-206ENST00000373388 ZNF555Q8NEP9 628 aa7.55□□□□□ -1.2
CSMD2-206ENST00000373388 FAM81BQ96LP2 452 aa7.55□□□□□ -1.2
CSMD2-206ENST00000373388 ZNF692Q9BU19 519 aaPredicted RBP7.55□□□□□ -1.2
CSMD2-206ENST00000373388 WWP1Q9H0M0 922 aa7.55□□□□□ -1.2
CSMD2-206ENST00000373388 MT-ND3P03897 115 aa7.55□□□□□ -1.2
CSMD2-206ENST00000373388 CCDC28BQ9BUN5 200 aa7.55□□□□□ -1.2
CSMD2-206ENST00000373388 PPARGC1AQ9UBK2 798 aaKnown RBP7.55□□□□□ -1.2
CSMD2-206ENST00000373388 PARP3Q9Y6F1 533 aa7.55□□□□□ -1.2
CSMD2-206ENST00000373388 KDM3AQ9Y4C1 1321 aa7.55□□□□□ -1.2
CSMD2-206ENST00000373388 B4DLN1 442 aa7.55□□□□□ -1.2
CSMD2-206ENST00000373388 PCF11O94913 1555 aaKnown RBP7.55□□□□□ -1.2
CSMD2-206ENST00000373388 ANXA1P04083 346 aa7.55□□□□□ -1.2
CSMD2-206ENST00000373388 SCP2P22307 547 aa7.55□□□□□ -1.2
CSMD2-206ENST00000373388 MRPL12P52815 198 aaKnown RBP7.55□□□□□ -1.2
CSMD2-206ENST00000373388 RASSF7Q02833 373 aa7.55□□□□□ -1.2
CSMD2-206ENST00000373388 RNASE11Q8TAA1 199 aaKnown RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms