RNA–Protein interactions for RNA: ENST00000368657.7

TUBE1-201, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-201ENST00000368657 ASGR2P07307 311 aa12.35□□□□□ -0.43
TUBE1-201ENST00000368657 MMP3P08254 477 aa12.35□□□□□ -0.43
TUBE1-201ENST00000368657 TECP42680 631 aa12.35□□□□□ -0.43
TUBE1-201ENST00000368657 PSEN2P49810 448 aa12.35□□□□□ -0.43
TUBE1-201ENST00000368657 MRPL12P52815 198 aaKnown RBP12.35□□□□□ -0.43
TUBE1-201ENST00000368657 SHC2P98077 582 aa12.35□□□□□ -0.43
TUBE1-201ENST00000368657 PDE4DQ08499 809 aa12.35□□□□□ -0.43
TUBE1-201ENST00000368657 TBC1D8BQ0IIM8 1120 aa12.35□□□□□ -0.43
TUBE1-201ENST00000368657 DGKDQ16760 1214 aa12.35□□□□□ -0.43
TUBE1-201ENST00000368657 TNNI3KQ59H18 835 aa12.35□□□□□ -0.43
TUBE1-201ENST00000368657 MUM1L1Q5H9M0 696 aa12.35□□□□□ -0.43
TUBE1-201ENST00000368657 PDE12Q6L8Q7 609 aaKnown RBP12.35□□□□□ -0.43
TUBE1-201ENST00000368657 CES5AQ6NT32 575 aa12.35□□□□□ -0.43
TUBE1-201ENST00000368657 SYCE2Q6PIF2 218 aa12.35□□□□□ -0.43
TUBE1-201ENST00000368657 VN1R2Q8NFZ6 395 aa12.35□□□□□ -0.43
TUBE1-201ENST00000368657 AFG1LQ8WV93 481 aa12.35□□□□□ -0.43
TUBE1-201ENST00000368657 RIN2Q8WYP3 895 aaPredicted RBP12.35□□□□□ -0.43
TUBE1-201ENST00000368657 PURBQ96QR8 312 aaKnown RBP12.35□□□□□ -0.43
TUBE1-201ENST00000368657 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.35□□□□□ -0.43
TUBE1-201ENST00000368657 MRS2Q9HD23 443 aa12.35□□□□□ -0.43
TUBE1-201ENST00000368657 SMC4Q9NTJ3 1288 aa12.35□□□□□ -0.43
TUBE1-201ENST00000368657 CLIP2Q9UDT6 1046 aa12.35□□□□□ -0.43
TUBE1-201ENST00000368657 FPGT-TNNI3KV9GXZ4 949 aa12.35□□□□□ -0.43
TUBE1-201ENST00000368657 FANCMQ8IYD8 2048 aa12.35□□□□□ -0.43
TUBE1-201ENST00000368657 CAND2O75155 1236 aa12.34□□□□□ -0.43
TUBE1-201ENST00000368657 BMP3P12645 472 aa12.34□□□□□ -0.43
TUBE1-201ENST00000368657 STAT2P52630 851 aa12.34□□□□□ -0.43
TUBE1-201ENST00000368657 UBE3AQ05086 875 aa12.34□□□□□ -0.43
TUBE1-201ENST00000368657 ITIH3Q06033 890 aa12.34□□□□□ -0.43
TUBE1-201ENST00000368657 KCNC3Q14003 757 aa12.34□□□□□ -0.43
TUBE1-201ENST00000368657 BAATQ14032 418 aaPredicted RBP12.34□□□□□ -0.43
TUBE1-201ENST00000368657 LRSAM1Q6UWE0 723 aa12.34□□□□□ -0.43
TUBE1-201ENST00000368657 FAM160B2Q86V87 743 aa12.34□□□□□ -0.43
TUBE1-201ENST00000368657 SERINC5Q86VE9 423 aa12.34□□□□□ -0.43
TUBE1-201ENST00000368657 DHX37Q8IY37 1157 aaKnown RBP12.34□□□□□ -0.43
TUBE1-201ENST00000368657 CRIPAKQ8N1N5 446 aa12.34□□□□□ -0.43
TUBE1-201ENST00000368657 RASGRP4Q8TDF6 673 aa12.34□□□□□ -0.43
TUBE1-201ENST00000368657 ALG1Q9BT22 464 aa12.34□□□□□ -0.43
TUBE1-201ENST00000368657 ERVK-5Q9HDB9 667 aa12.34□□□□□ -0.43
TUBE1-201ENST00000368657 FBXL21Q9UKT6 434 aa12.34□□□□□ -0.43
TUBE1-201ENST00000368657 FLNBO75369 2602 aaKnown RBP12.34□□□□□ -0.43
TUBE1-201ENST00000368657 TMEM232C9JQI7 657 aa12.33□□□□□ -0.44
TUBE1-201ENST00000368657 HAS3O00219 553 aa12.33□□□□□ -0.44
TUBE1-201ENST00000368657 SLC30A4O14863 429 aa12.33□□□□□ -0.44
TUBE1-201ENST00000368657 DGKIO75912 1065 aa12.33□□□□□ -0.44
TUBE1-201ENST00000368657 GH1P01241 217 aa12.33□□□□□ -0.44
TUBE1-201ENST00000368657 ARP10275 920 aa12.33□□□□□ -0.44
TUBE1-201ENST00000368657 RBM10P98175 930 aaKnown RBP12.33□□□□□ -0.44
TUBE1-201ENST00000368657 MFSD10Q14728 455 aa12.33□□□□□ -0.44
TUBE1-201ENST00000368657 KIAA0753Q2KHM9 967 aa12.33□□□□□ -0.44
TUBE1-201ENST00000368657 TPRNQ4KMQ1 711 aa12.33□□□□□ -0.44
TUBE1-201ENST00000368657 C1orf210Q8IVY1 113 aa12.33□□□□□ -0.44
TUBE1-201ENST00000368657 SIX5Q8N196 739 aa12.33□□□□□ -0.44
TUBE1-201ENST00000368657 DDX1Q92499 740 aaKnown RBP12.33□□□□□ -0.44
TUBE1-201ENST00000368657 USTQ9Y2C2 406 aa12.33□□□□□ -0.44
TUBE1-201ENST00000368657 SPTLC1O15269 473 aa12.32□□□□□ -0.44
TUBE1-201ENST00000368657 PLA2G6O60733 806 aa12.32□□□□□ -0.44
TUBE1-201ENST00000368657 MTHFRP42898 656 aa12.32□□□□□ -0.44
TUBE1-201ENST00000368657 TDGQ13569 410 aa12.32□□□□□ -0.44
TUBE1-201ENST00000368657 SLC9C2Q5TAH2 1124 aa12.32□□□□□ -0.44
TUBE1-201ENST00000368657 CMTR2Q8IYT2 770 aaKnown RBP12.32□□□□□ -0.44
TUBE1-201ENST00000368657 TDRD5Q8NAT2 981 aaKnown RBP12.32□□□□□ -0.44
TUBE1-201ENST00000368657 GMCL1P1Q8NEA9 526 aa12.32□□□□□ -0.44
TUBE1-201ENST00000368657 NETO1Q8TDF5 533 aa12.32□□□□□ -0.44
TUBE1-201ENST00000368657 STAG1Q8WVM7 1258 aa12.32□□□□□ -0.44
TUBE1-201ENST00000368657 DDRGK1Q96HY6 314 aa12.32□□□□□ -0.44
TUBE1-201ENST00000368657 ADAM7Q9H2U9 754 aa12.32□□□□□ -0.44
TUBE1-201ENST00000368657 POMKQ9H5K3 350 aa12.32□□□□□ -0.44
TUBE1-201ENST00000368657 USP18Q9UMW8 372 aa12.32□□□□□ -0.44
TUBE1-201ENST00000368657 ENPP3O14638 875 aa12.31□□□□□ -0.44
TUBE1-201ENST00000368657 RFX1P22670 979 aa12.31□□□□□ -0.44
TUBE1-201ENST00000368657 EDNRBP24530 442 aa12.31□□□□□ -0.44
TUBE1-201ENST00000368657 PMLP29590 882 aa12.31□□□□□ -0.44
TUBE1-201ENST00000368657 TTF1Q15361 905 aaPredicted RBP12.31□□□□□ -0.44
TUBE1-201ENST00000368657 ZNF528Q3MIS6 628 aa12.31□□□□□ -0.44
TUBE1-201ENST00000368657 CCDC62Q6P9F0 684 aa12.31□□□□□ -0.44
TUBE1-201ENST00000368657 RUFY4Q6ZNE9 571 aa12.31□□□□□ -0.44
TUBE1-201ENST00000368657 DNERQ8NFT8 737 aa12.31□□□□□ -0.44
TUBE1-201ENST00000368657 APOL5Q9BWW9 433 aa12.31□□□□□ -0.44
TUBE1-201ENST00000368657 ANTXR1Q9H6X2 564 aa12.31□□□□□ -0.44
TUBE1-201ENST00000368657 CYP26B1Q9NR63 512 aa12.31□□□□□ -0.44
TUBE1-201ENST00000368657 WNT16Q9UBV4 365 aa12.31□□□□□ -0.44
TUBE1-201ENST00000368657 ZMIZ1Q9ULJ6 1067 aa12.31□□□□□ -0.44
TUBE1-201ENST00000368657 SALL2Q9Y467 1007 aaPredicted RBP12.31□□□□□ -0.44
TUBE1-201ENST00000368657 MRPL42Q9Y6G3 142 aaKnown RBP12.31□□□□□ -0.44
TUBE1-201ENST00000368657 ARIH2O95376 493 aa12.3□□□□□ -0.44
TUBE1-201ENST00000368657 F2P00734 622 aa12.3□□□□□ -0.44
TUBE1-201ENST00000368657 GNAI3P08754 354 aa12.3□□□□□ -0.44
TUBE1-201ENST00000368657 TGM1P22735 817 aa12.3□□□□□ -0.44
TUBE1-201ENST00000368657 IKQ13123 557 aaPredicted RBP12.3□□□□□ -0.44
TUBE1-201ENST00000368657 SLFN13Q68D06 897 aa12.3□□□□□ -0.44
TUBE1-201ENST00000368657 LCORLQ8N3X6 602 aa12.3□□□□□ -0.44
TUBE1-201ENST00000368657 SSH1Q8WYL5 1049 aa12.3□□□□□ -0.44
TUBE1-201ENST00000368657 CCPG1Q9ULG6 757 aa12.3□□□□□ -0.44
TUBE1-201ENST00000368657 DUSP12Q9UNI6 340 aa12.3□□□□□ -0.44
TUBE1-201ENST00000368657 ASH1LQ9NR48 2969 aaKnown RBP12.3□□□□□ -0.44
TUBE1-201ENST00000368657 ZFYVE26Q68DK2 2539 aa12.3□□□□□ -0.44
TUBE1-201ENST00000368657 GCN1Q92616 2671 aaKnown RBP12.29□□□□□ -0.44
TUBE1-201ENST00000368657 CYP2D7A0A087X1C5 515 aa12.29□□□□□ -0.44
TUBE1-201ENST00000368657 PTPDC1A2A3K4 754 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms