RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 SUV39H2Q9H5I1 410 aa7.64□□□□□ -1.19
ECHDC1-202ENST00000368289 LIN7BQ9HAP6 207 aa7.64□□□□□ -1.19
ECHDC1-202ENST00000368289 ZFYVE1Q9HBF4 777 aa7.64□□□□□ -1.19
ECHDC1-202ENST00000368289 ATP6V1DQ9Y5K8 247 aa7.64□□□□□ -1.19
ECHDC1-202ENST00000368289 CSADQ9Y600 493 aa7.64□□□□□ -1.19
ECHDC1-202ENST00000368289 PLXNB2O15031 1838 aa7.64□□□□□ -1.19
ECHDC1-202ENST00000368289 NCLP19338 710 aaKnown RBP7.63□□□□□ -1.19
ECHDC1-202ENST00000368289 CHMLP26374 656 aa7.63□□□□□ -1.19
ECHDC1-202ENST00000368289 AFF1P51825 1210 aaKnown RBP7.63□□□□□ -1.19
ECHDC1-202ENST00000368289 PPATQ06203 517 aa7.63□□□□□ -1.19
ECHDC1-202ENST00000368289 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.63□□□□□ -1.19
ECHDC1-202ENST00000368289 GDF6Q6KF10 455 aaPredicted RBP7.63□□□□□ -1.19
ECHDC1-202ENST00000368289 FBXO33Q7Z6M2 555 aa7.63□□□□□ -1.19
ECHDC1-202ENST00000368289 WFDC8Q8IUA0 241 aa7.63□□□□□ -1.19
ECHDC1-202ENST00000368289 RGS22Q8NE09 1264 aa7.63□□□□□ -1.19
ECHDC1-202ENST00000368289 EPS8L3Q8TE67 593 aaKnown RBP7.63□□□□□ -1.19
ECHDC1-202ENST00000368289 XAGE3Q8WTP9 111 aa7.63□□□□□ -1.19
ECHDC1-202ENST00000368289 GPATCH3Q96I76 525 aa7.63□□□□□ -1.19
ECHDC1-202ENST00000368289 RNPC3Q96LT9 517 aaKnown RBP7.63□□□□□ -1.19
ECHDC1-202ENST00000368289 WRNIP1Q96S55 665 aa7.63□□□□□ -1.19
ECHDC1-202ENST00000368289 BHLHE41Q9C0J9 482 aaPredicted RBP7.63□□□□□ -1.19
ECHDC1-202ENST00000368289 TDRD3Q9H7E2 651 aaKnown RBP7.63□□□□□ -1.19
ECHDC1-202ENST00000368289 PDLIM7Q9NR12 457 aa7.63□□□□□ -1.19
ECHDC1-202ENST00000368289 NOP53Q9NZM5 478 aaKnown RBP7.63□□□□□ -1.19
ECHDC1-202ENST00000368289 DBF4Q9UBU7 674 aaPredicted RBP7.63□□□□□ -1.19
ECHDC1-202ENST00000368289 MINPP1Q9UNW1 487 aa7.63□□□□□ -1.19
ECHDC1-202ENST00000368289 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.63□□□□□ -1.19
ECHDC1-202ENST00000368289 ECM29Q5VYK3 1845 aa7.63□□□□□ -1.19
ECHDC1-202ENST00000368289 FRYQ5TBA9 3013 aa7.62□□□□□ -1.19
ECHDC1-202ENST00000368289 FAM208BQ5VWN6 2430 aa7.62□□□□□ -1.19
ECHDC1-202ENST00000368289 GCN1Q92616 2671 aaKnown RBP7.62□□□□□ -1.19
ECHDC1-202ENST00000368289 TCP10L2B9ZVM9 353 aa7.62□□□□□ -1.19
ECHDC1-202ENST00000368289 SNAP23O00161 211 aa7.62□□□□□ -1.19
ECHDC1-202ENST00000368289 IRS4O14654 1257 aaPredicted RBP7.62□□□□□ -1.19
ECHDC1-202ENST00000368289 GNB5O14775 395 aa7.62□□□□□ -1.19
ECHDC1-202ENST00000368289 CDC27P30260 824 aa7.62□□□□□ -1.19
ECHDC1-202ENST00000368289 HSPA4P34932 840 aa7.62□□□□□ -1.19
ECHDC1-202ENST00000368289 CACNB2Q08289 660 aaPredicted RBP7.62□□□□□ -1.19
ECHDC1-202ENST00000368289 C16orf59Q7L2K0 433 aa7.62□□□□□ -1.19
ECHDC1-202ENST00000368289 GIPC2Q8TF65 315 aa7.62□□□□□ -1.19
ECHDC1-202ENST00000368289 ZSCAN31Q96LW9 406 aaPredicted RBP7.62□□□□□ -1.19
ECHDC1-202ENST00000368289 UIMC1Q96RL1 719 aa7.62□□□□□ -1.19
ECHDC1-202ENST00000368289 PARK7Q99497 189 aaKnown RBP7.62□□□□□ -1.19
ECHDC1-202ENST00000368289 POP1Q99575 1024 aaKnown RBP7.62□□□□□ -1.19
ECHDC1-202ENST00000368289 ADAM19Q9H013 955 aa7.62□□□□□ -1.19
ECHDC1-202ENST00000368289 USP44Q9H0E7 712 aa7.62□□□□□ -1.19
ECHDC1-202ENST00000368289 LATS2Q9NRM7 1088 aa7.62□□□□□ -1.19
ECHDC1-202ENST00000368289 STK17AQ9UEE5 414 aa7.62□□□□□ -1.19
ECHDC1-202ENST00000368289 JAG2Q9Y219 1238 aa7.62□□□□□ -1.19
ECHDC1-202ENST00000368289 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.61□□□□□ -1.19
ECHDC1-202ENST00000368289 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.61□□□□□ -1.19
ECHDC1-202ENST00000368289 MED19A0JLT2 244 aaPredicted RBP7.61□□□□□ -1.19
ECHDC1-202ENST00000368289 PEX10O60683 326 aa7.61□□□□□ -1.19
ECHDC1-202ENST00000368289 GLRX3O76003 335 aaKnown RBP7.61□□□□□ -1.19
ECHDC1-202ENST00000368289 DDX58O95786 925 aaKnown RBP7.61□□□□□ -1.19
ECHDC1-202ENST00000368289 XRCC5P13010 732 aaKnown RBP7.61□□□□□ -1.19
ECHDC1-202ENST00000368289 ACPPP15309 386 aa7.61□□□□□ -1.19
ECHDC1-202ENST00000368289 GNA15P30679 374 aa7.61□□□□□ -1.19
ECHDC1-202ENST00000368289 NASPP49321 788 aaPredicted RBP7.61□□□□□ -1.19
ECHDC1-202ENST00000368289 NEK4P51957 841 aa7.61□□□□□ -1.19
ECHDC1-202ENST00000368289 CACNB3P54284 484 aa7.61□□□□□ -1.19
ECHDC1-202ENST00000368289 AIMP1Q12904 312 aaKnown RBP7.61□□□□□ -1.19
ECHDC1-202ENST00000368289 GRIK5Q16478 980 aa7.61□□□□□ -1.19
ECHDC1-202ENST00000368289 KRT24Q2M2I5 525 aa7.61□□□□□ -1.19
ECHDC1-202ENST00000368289 RASIP1Q5U651 963 aa7.61□□□□□ -1.19
ECHDC1-202ENST00000368289 FAM117BQ6P1L5 589 aa7.61□□□□□ -1.19
ECHDC1-202ENST00000368289 KIAA1211Q6ZU35 1233 aa7.61□□□□□ -1.19
ECHDC1-202ENST00000368289 G2E3Q7L622 706 aa7.61□□□□□ -1.19
ECHDC1-202ENST00000368289 CCNJLQ8IV13 435 aa7.61□□□□□ -1.19
ECHDC1-202ENST00000368289 FAM184AQ8NB25 1140 aa7.61□□□□□ -1.19
ECHDC1-202ENST00000368289 ASAP3Q8TDY4 903 aa7.61□□□□□ -1.19
ECHDC1-202ENST00000368289 DNAAF4Q8WXU2 420 aa7.61□□□□□ -1.19
ECHDC1-202ENST00000368289 BSNDQ8WZ55 320 aa7.61□□□□□ -1.19
ECHDC1-202ENST00000368289 JARID2Q92833 1246 aaPredicted RBP7.61□□□□□ -1.19
ECHDC1-202ENST00000368289 BCO2Q9BYV7 579 aa7.61□□□□□ -1.19
ECHDC1-202ENST00000368289 TM6SF1Q9BZW5 370 aa7.61□□□□□ -1.19
ECHDC1-202ENST00000368289 KCNH6Q9H252 994 aa7.61□□□□□ -1.19
ECHDC1-202ENST00000368289 LMBRD1Q9NUN5 540 aa7.61□□□□□ -1.19
ECHDC1-202ENST00000368289 BSDC1Q9NW68 430 aaPredicted RBP7.61□□□□□ -1.19
ECHDC1-202ENST00000368289 HYPKQ9NX55 129 aa7.61□□□□□ -1.19
ECHDC1-202ENST00000368289 RALYQ9UKM9 306 aaKnown RBP7.61□□□□□ -1.19
ECHDC1-202ENST00000368289 TRIM33Q9UPN9 1127 aa7.61□□□□□ -1.19
ECHDC1-202ENST00000368289 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.61□□□□□ -1.19
ECHDC1-202ENST00000368289 TECTAO75443 2155 aa7.61□□□□□ -1.19
ECHDC1-202ENST00000368289 LRRC37A2A6NM11 1700 aa7.61□□□□□ -1.19
ECHDC1-202ENST00000368289 NAV2Q8IVL1 2488 aa7.6□□□□□ -1.19
ECHDC1-202ENST00000368289 RAD50Q92878 1312 aa7.6□□□□□ -1.19
ECHDC1-202ENST00000368289 RNF225M0QZC1 329 aaPredicted RBP7.6□□□□□ -1.19
ECHDC1-202ENST00000368289 EIF4EBP3O60516 100 aaPredicted RBP7.6□□□□□ -1.19
ECHDC1-202ENST00000368289 IRS1P35568 1242 aa7.6□□□□□ -1.19
ECHDC1-202ENST00000368289 COL9A2Q14055 689 aaPredicted RBP7.6□□□□□ -1.19
ECHDC1-202ENST00000368289 KCTD2Q14681 263 aa7.6□□□□□ -1.19
ECHDC1-202ENST00000368289 SNX17Q15036 470 aa7.6□□□□□ -1.19
ECHDC1-202ENST00000368289 UVSSAQ2YD98 709 aa7.6□□□□□ -1.19
ECHDC1-202ENST00000368289 HSP90AB3PQ58FF7 597 aa7.6□□□□□ -1.19
ECHDC1-202ENST00000368289 KRT40Q6A162 431 aa7.6□□□□□ -1.19
ECHDC1-202ENST00000368289 LINC00114Q6XXX2 140 aa7.6□□□□□ -1.19
ECHDC1-202ENST00000368289 C8orf86Q6ZUL3 223 aa7.6□□□□□ -1.19
ECHDC1-202ENST00000368289 CLASRPQ8N2M8 674 aaKnown RBP7.6□□□□□ -1.19
ECHDC1-202ENST00000368289 IL22RA1Q8N6P7 574 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms