RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 NMT2O60551 498 aa12.88□□□□□ -0.35
CSNK1E-202ENST00000366216 NDUFB10O96000 172 aa12.88□□□□□ -0.35
CSNK1E-202ENST00000366216 SUPT20HL2P0C7V6 817 aa12.88□□□□□ -0.35
CSNK1E-202ENST00000366216 CYP2C9P11712 490 aa12.88□□□□□ -0.35
CSNK1E-202ENST00000366216 IL9P15248 144 aa12.88□□□□□ -0.35
CSNK1E-202ENST00000366216 SMPD1P17405 629 aa12.88□□□□□ -0.35
CSNK1E-202ENST00000366216 KCNA5P22460 613 aa12.88□□□□□ -0.35
CSNK1E-202ENST00000366216 RFC2P35250 354 aa12.88□□□□□ -0.35
CSNK1E-202ENST00000366216 KRT85P78386 507 aa12.88□□□□□ -0.35
CSNK1E-202ENST00000366216 ATL3Q6DD88 541 aa12.88□□□□□ -0.35
CSNK1E-202ENST00000366216 FAM133AQ8N9E0 248 aa12.88□□□□□ -0.35
CSNK1E-202ENST00000366216 CHAMP1Q96JM3 812 aa12.88□□□□□ -0.35
CSNK1E-202ENST00000366216 RNF26Q9BY78 433 aaPredicted RBP12.88□□□□□ -0.35
CSNK1E-202ENST00000366216 KAT14Q9H8E8 782 aa12.88□□□□□ -0.35
CSNK1E-202ENST00000366216 TRMT13Q9NUP7 481 aaKnown RBP12.88□□□□□ -0.35
CSNK1E-202ENST00000366216 ZFHX2Q9C0A1 2572 aaPredicted RBP12.88□□□□□ -0.35
CSNK1E-202ENST00000366216 KIAA1217Q5T5P2 1943 aa12.88□□□□□ -0.35
CSNK1E-202ENST00000366216 POTEB3A0JP26 581 aa12.87□□□□□ -0.35
CSNK1E-202ENST00000366216 GRXCR2A6NFK2 248 aa12.87□□□□□ -0.35
CSNK1E-202ENST00000366216 F5H6K3 240 aa12.87□□□□□ -0.35
CSNK1E-202ENST00000366216 DYNC1LI2O43237 492 aaPredicted RBP12.87□□□□□ -0.35
CSNK1E-202ENST00000366216 DEXIO95424 95 aa12.87□□□□□ -0.35
CSNK1E-202ENST00000366216 MBD3O95983 291 aa12.87□□□□□ -0.35
CSNK1E-202ENST00000366216 DNM1Q05193 864 aaKnown RBP12.87□□□□□ -0.35
CSNK1E-202ENST00000366216 KLRC3Q07444 240 aa12.87□□□□□ -0.35
CSNK1E-202ENST00000366216 FUT2Q10981 343 aa12.87□□□□□ -0.35
CSNK1E-202ENST00000366216 TAPT1Q6NXT6 567 aa12.87□□□□□ -0.35
CSNK1E-202ENST00000366216 POTEBQ6S5H4 581 aa12.87□□□□□ -0.35
CSNK1E-202ENST00000366216 FERMT3Q86UX7 667 aa12.87□□□□□ -0.35
CSNK1E-202ENST00000366216 PRPF38AQ8NAV1 312 aaKnown RBP12.87□□□□□ -0.35
CSNK1E-202ENST00000366216 CHST13Q8NET6 341 aa12.87□□□□□ -0.35
CSNK1E-202ENST00000366216 CTCFLQ8NI51 663 aaPredicted RBP12.87□□□□□ -0.35
CSNK1E-202ENST00000366216 PHKBQ93100 1093 aa12.87□□□□□ -0.35
CSNK1E-202ENST00000366216 PURBQ96QR8 312 aaKnown RBP12.87□□□□□ -0.35
CSNK1E-202ENST00000366216 PHOX2BQ99453 314 aa12.87□□□□□ -0.35
CSNK1E-202ENST00000366216 ALG1Q9BT22 464 aa12.87□□□□□ -0.35
CSNK1E-202ENST00000366216 SLC26A6Q9BXS9 759 aa12.87□□□□□ -0.35
CSNK1E-202ENST00000366216 SLC38A10Q9HBR0 1119 aa12.87□□□□□ -0.35
CSNK1E-202ENST00000366216 FBXO40Q9UH90 709 aa12.87□□□□□ -0.35
CSNK1E-202ENST00000366216 MYH15Q9Y2K3 1946 aa12.87□□□□□ -0.35
CSNK1E-202ENST00000366216 PLXNA3P51805 1871 aa12.87□□□□□ -0.35
CSNK1E-202ENST00000366216 MYH6P13533 1939 aa12.86□□□□□ -0.35
CSNK1E-202ENST00000366216 IGKV6D-41A0A0C4DH26 115 aa12.86□□□□□ -0.35
CSNK1E-202ENST00000366216 LCHNA4D1U4 455 aa12.86□□□□□ -0.35
CSNK1E-202ENST00000366216 PRPF3O43395 683 aaKnown RBP12.86□□□□□ -0.35
CSNK1E-202ENST00000366216 ZBED4O75132 1171 aa12.86□□□□□ -0.35
CSNK1E-202ENST00000366216 BAIAP3O94812 1187 aa12.86□□□□□ -0.35
CSNK1E-202ENST00000366216 NCLP19338 710 aaKnown RBP12.86□□□□□ -0.35
CSNK1E-202ENST00000366216 KIF5BP33176 963 aa12.86□□□□□ -0.35
CSNK1E-202ENST00000366216 GNAQP50148 359 aa12.86□□□□□ -0.35
CSNK1E-202ENST00000366216 GPNMBQ14956 572 aa12.86□□□□□ -0.35
CSNK1E-202ENST00000366216 FOXD4L6Q3SYB3 417 aaPredicted RBP12.86□□□□□ -0.35
CSNK1E-202ENST00000366216 PPP4R3BQ5MIZ7 849 aa12.86□□□□□ -0.35
CSNK1E-202ENST00000366216 FOXD4L3Q6VB84 417 aaPredicted RBP12.86□□□□□ -0.35
CSNK1E-202ENST00000366216 HFE2Q6ZVN8 426 aa12.86□□□□□ -0.35
CSNK1E-202ENST00000366216 TMTC3Q6ZXV5 915 aa12.86□□□□□ -0.35
CSNK1E-202ENST00000366216 TMCO2Q7Z6W1 182 aaPredicted RBP12.86□□□□□ -0.35
CSNK1E-202ENST00000366216 PNMA1Q8ND90 353 aa12.86□□□□□ -0.35
CSNK1E-202ENST00000366216 FTOQ9C0B1 505 aaKnown RBP eCLIP12.86□□□□□ -0.35
CSNK1E-202ENST00000366216 SCAND2PQ9GZW5 306 aaPredicted RBP12.86□□□□□ -0.35
CSNK1E-202ENST00000366216 Q9Y3F1 56 aa12.86□□□□□ -0.35
CSNK1E-202ENST00000366216 CTDP1Q9Y5B0 961 aaPredicted RBP12.86□□□□□ -0.35
CSNK1E-202ENST00000366216 ASB14A6NK59 587 aa12.85□□□□□ -0.35
CSNK1E-202ENST00000366216 PITPNM1O00562 1244 aa12.85□□□□□ -0.35
CSNK1E-202ENST00000366216 PPFIA3O75145 1194 aa12.85□□□□□ -0.35
CSNK1E-202ENST00000366216 IQCF3P0C7M6 154 aa12.85□□□□□ -0.35
CSNK1E-202ENST00000366216 TOP1P11387 765 aaKnown RBP12.85□□□□□ -0.35
CSNK1E-202ENST00000366216 AKAP17AQ02040 695 aaKnown RBP12.85□□□□□ -0.35
CSNK1E-202ENST00000366216 TRIM29Q14134 588 aa12.85□□□□□ -0.35
CSNK1E-202ENST00000366216 GRM4Q14833 912 aa12.85□□□□□ -0.35
CSNK1E-202ENST00000366216 TCTN1Q2MV58 587 aa12.85□□□□□ -0.35
CSNK1E-202ENST00000366216 PUS10Q3MIT2 529 aaKnown RBP12.85□□□□□ -0.35
CSNK1E-202ENST00000366216 BRAPQ7Z569 592 aa12.85□□□□□ -0.35
CSNK1E-202ENST00000366216 TMEM47Q9BQJ4 181 aa12.85□□□□□ -0.35
CSNK1E-202ENST00000366216 SUGCTQ9HAC7 445 aa12.85□□□□□ -0.35
CSNK1E-202ENST00000366216 A1CFQ9NQ94 594 aaKnown RBP12.85□□□□□ -0.35
CSNK1E-202ENST00000366216 HOMER2Q9NSB8 354 aa12.85□□□□□ -0.35
CSNK1E-202ENST00000366216 CFAP45Q9UL16 551 aa12.85□□□□□ -0.35
CSNK1E-202ENST00000366216 PTPRZ1P23471 2315 aaPredicted RBP12.85□□□□□ -0.35
CSNK1E-202ENST00000366216 WDR87Q6ZQQ6 2873 aa12.84□□□□□ -0.35
CSNK1E-202ENST00000366216 KCNJ6P48051 423 aa12.84□□□□□ -0.35
CSNK1E-202ENST00000366216 FOSBP53539 338 aa12.84□□□□□ -0.35
CSNK1E-202ENST00000366216 UBE2HP62256 183 aa12.84□□□□□ -0.35
CSNK1E-202ENST00000366216 GUCY1B3Q02153 619 aa12.84□□□□□ -0.35
CSNK1E-202ENST00000366216 GSE1Q14687 1217 aa12.84□□□□□ -0.35
CSNK1E-202ENST00000366216 IQSEC1Q6DN90 963 aa12.84□□□□□ -0.35
CSNK1E-202ENST00000366216 EEPD1Q7L9B9 569 aa12.84□□□□□ -0.35
CSNK1E-202ENST00000366216 FBXO16Q8IX29 292 aaPredicted RBP12.84□□□□□ -0.35
CSNK1E-202ENST00000366216 SPDYE1Q8NFV5 336 aaPredicted RBP12.84□□□□□ -0.35
CSNK1E-202ENST00000366216 GPT2Q8TD30 523 aa12.84□□□□□ -0.35
CSNK1E-202ENST00000366216 KIFC2Q96AC6 838 aa12.84□□□□□ -0.35
CSNK1E-202ENST00000366216 CEP95Q96GE4 821 aa12.84□□□□□ -0.35
CSNK1E-202ENST00000366216 MFSD14AQ96MC6 490 aa12.84□□□□□ -0.35
CSNK1E-202ENST00000366216 ZNF396Q96N95 335 aaPredicted RBP12.84□□□□□ -0.35
CSNK1E-202ENST00000366216 LZTS2Q9BRK4 669 aa12.84□□□□□ -0.35
CSNK1E-202ENST00000366216 GDPD2Q9HCC8 539 aa12.84□□□□□ -0.35
CSNK1E-202ENST00000366216 MTMR4Q9NYA4 1195 aa12.84□□□□□ -0.35
CSNK1E-202ENST00000366216 MTUS1Q9ULD2 1270 aa12.84□□□□□ -0.35
CSNK1E-202ENST00000366216 STX8Q9UNK0 236 aa12.84□□□□□ -0.35
CSNK1E-202ENST00000366216 CNTNAP5Q8WYK1 1306 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms