RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 IQCB1Q15051 598 aa12.05□□□□□ -0.48
TRAPPC4-201ENST00000359005 E2F4Q16254 413 aa12.05□□□□□ -0.48
TRAPPC4-201ENST00000359005 PRPF38BQ5VTL8 546 aaKnown RBP12.05□□□□□ -0.48
TRAPPC4-201ENST00000359005 LUZP1Q86V48 1076 aa12.05□□□□□ -0.48
TRAPPC4-201ENST00000359005 MB21D1Q8N884 522 aa12.05□□□□□ -0.48
TRAPPC4-201ENST00000359005 SLAIN1Q8ND83 568 aa12.05□□□□□ -0.48
TRAPPC4-201ENST00000359005 ANKRD20A12PQ8NF67 263 aa12.05□□□□□ -0.48
TRAPPC4-201ENST00000359005 PXYLP1Q8TE99 480 aa12.05□□□□□ -0.48
TRAPPC4-201ENST00000359005 USP6NLQ92738 828 aa12.05□□□□□ -0.48
TRAPPC4-201ENST00000359005 TMEM60Q9H2L4 133 aa12.05□□□□□ -0.48
TRAPPC4-201ENST00000359005 LAMA3Q16787 3333 aa12.04□□□□□ -0.48
TRAPPC4-201ENST00000359005 SPDYE16A6NNV3 312 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC4-201ENST00000359005 B4DLN1 442 aa12.04□□□□□ -0.48
TRAPPC4-201ENST00000359005 WNT7AO00755 349 aa12.04□□□□□ -0.48
TRAPPC4-201ENST00000359005 KIF20AO95235 890 aa12.04□□□□□ -0.48
TRAPPC4-201ENST00000359005 TDP2O95551 362 aa12.04□□□□□ -0.48
TRAPPC4-201ENST00000359005 MUTP22033 750 aa12.04□□□□□ -0.48
TRAPPC4-201ENST00000359005 COPB2P35606 906 aa12.04□□□□□ -0.48
TRAPPC4-201ENST00000359005 GHRHRQ02643 423 aa12.04□□□□□ -0.48
TRAPPC4-201ENST00000359005 DPYDQ12882 1025 aa12.04□□□□□ -0.48
TRAPPC4-201ENST00000359005 KARSQ15046 597 aaKnown RBP12.04□□□□□ -0.48
TRAPPC4-201ENST00000359005 IL17AQ16552 155 aa12.04□□□□□ -0.48
TRAPPC4-201ENST00000359005 CCL14Q16627 93 aa12.04□□□□□ -0.48
TRAPPC4-201ENST00000359005 TPD52L1Q16890 204 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC4-201ENST00000359005 DPCR1Q3MIW9 517 aa12.04□□□□□ -0.48
TRAPPC4-201ENST00000359005 PDXDC2PQ6P474 469 aa12.04□□□□□ -0.48
TRAPPC4-201ENST00000359005 SAMD1Q6SPF0 538 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC4-201ENST00000359005 NIPA1Q7RTP0 329 aa12.04□□□□□ -0.48
TRAPPC4-201ENST00000359005 AOPEPQ8N6M6 819 aa12.04□□□□□ -0.48
TRAPPC4-201ENST00000359005 SNX29Q8TEQ0 813 aa12.04□□□□□ -0.48
TRAPPC4-201ENST00000359005 U2AF1L4Q8WU68 220 aaKnown RBP12.04□□□□□ -0.48
TRAPPC4-201ENST00000359005 TRIB2Q92519 343 aa12.04□□□□□ -0.48
TRAPPC4-201ENST00000359005 MRFAP1L1Q96HT8 127 aa12.04□□□□□ -0.48
TRAPPC4-201ENST00000359005 MPHOSPH6Q99547 160 aaKnown RBP12.04□□□□□ -0.48
TRAPPC4-201ENST00000359005 WDR11Q9BZH6 1224 aa12.04□□□□□ -0.48
TRAPPC4-201ENST00000359005 KCNMB3Q9NPA1 279 aa12.04□□□□□ -0.48
TRAPPC4-201ENST00000359005 MAN1B1Q9UKM7 699 aa12.04□□□□□ -0.48
TRAPPC4-201ENST00000359005 SZT2Q5T011 3432 aa12.03□□□□□ -0.48
TRAPPC4-201ENST00000359005 ATP2A1O14983 1001 aa12.03□□□□□ -0.48
TRAPPC4-201ENST00000359005 SGPL1O95470 568 aa12.03□□□□□ -0.48
TRAPPC4-201ENST00000359005 RPN1P04843 607 aaKnown RBP12.03□□□□□ -0.48
TRAPPC4-201ENST00000359005 ALAS1P13196 640 aa12.03□□□□□ -0.48
TRAPPC4-201ENST00000359005 HSD17B4P51659 736 aa12.03□□□□□ -0.48
TRAPPC4-201ENST00000359005 MORN1Q5T089 497 aa12.03□□□□□ -0.48
TRAPPC4-201ENST00000359005 ZNF658Q5TYW1 1059 aaPredicted RBP12.03□□□□□ -0.48
TRAPPC4-201ENST00000359005 CNNM4Q6P4Q7 775 aa12.03□□□□□ -0.48
TRAPPC4-201ENST00000359005 C11orf57Q6ZUT1 292 aaPredicted RBP12.03□□□□□ -0.48
TRAPPC4-201ENST00000359005 USP49Q70CQ1 688 aa12.03□□□□□ -0.48
TRAPPC4-201ENST00000359005 GPR142Q7Z601 462 aa12.03□□□□□ -0.48
TRAPPC4-201ENST00000359005 FCHSD1Q86WN1 690 aa12.03□□□□□ -0.48
TRAPPC4-201ENST00000359005 ENOX1Q8TC92 643 aaKnown RBP12.03□□□□□ -0.48
TRAPPC4-201ENST00000359005 DEFB118Q96PH6 123 aa12.03□□□□□ -0.48
TRAPPC4-201ENST00000359005 CTAGE1Q96RT6 745 aa12.03□□□□□ -0.48
TRAPPC4-201ENST00000359005 PAK6Q9NQU5 681 aaPredicted RBP12.03□□□□□ -0.48
TRAPPC4-201ENST00000359005 KBTBD4Q9NVX7 518 aa12.03□□□□□ -0.48
TRAPPC4-201ENST00000359005 FBXO40Q9UH90 709 aa12.03□□□□□ -0.48
TRAPPC4-201ENST00000359005 PTPRFP10586 1907 aa12.03□□□□□ -0.48
TRAPPC4-201ENST00000359005 DOCK3Q8IZD9 2030 aa12.03□□□□□ -0.48
TRAPPC4-201ENST00000359005 PVALEFA0A1B0GWK0 134 aa12.02□□□□□ -0.49
TRAPPC4-201ENST00000359005 VWA5AO00534 786 aa12.02□□□□□ -0.49
TRAPPC4-201ENST00000359005 ADAMTS3O15072 1205 aa12.02□□□□□ -0.49
TRAPPC4-201ENST00000359005 SLC37A4O43826 429 aa12.02□□□□□ -0.49
TRAPPC4-201ENST00000359005 PLCG1P19174 1290 aa12.02□□□□□ -0.49
TRAPPC4-201ENST00000359005 CDK11BP21127 795 aaKnown RBP12.02□□□□□ -0.49
TRAPPC4-201ENST00000359005 DSG3P32926 999 aa12.02□□□□□ -0.49
TRAPPC4-201ENST00000359005 CCT6AP40227 531 aaKnown RBP12.02□□□□□ -0.49
TRAPPC4-201ENST00000359005 MNX1P50219 401 aaPredicted RBP12.02□□□□□ -0.49
TRAPPC4-201ENST00000359005 SNAP25P60880 206 aa12.02□□□□□ -0.49
TRAPPC4-201ENST00000359005 UBXN2AP68543 259 aa12.02□□□□□ -0.49
TRAPPC4-201ENST00000359005 SPAG1Q07617 926 aa12.02□□□□□ -0.49
TRAPPC4-201ENST00000359005 PSMD2Q13200 908 aa12.02□□□□□ -0.49
TRAPPC4-201ENST00000359005 CEP55Q53EZ4 464 aa12.02□□□□□ -0.49
TRAPPC4-201ENST00000359005 PRR16Q569H4 304 aa12.02□□□□□ -0.49
TRAPPC4-201ENST00000359005 LBX2Q6XYB7 198 aa12.02□□□□□ -0.49
TRAPPC4-201ENST00000359005 DHX40Q8IX18 779 aaKnown RBP12.02□□□□□ -0.49
TRAPPC4-201ENST00000359005 NEK9Q8TD19 979 aa12.02□□□□□ -0.49
TRAPPC4-201ENST00000359005 GTF3C2Q8WUA4 911 aaPredicted RBP12.02□□□□□ -0.49
TRAPPC4-201ENST00000359005 CRYGNQ8WXF5 182 aa12.02□□□□□ -0.49
TRAPPC4-201ENST00000359005 LARP4BQ92615 738 aaKnown RBP12.02□□□□□ -0.49
TRAPPC4-201ENST00000359005 TRERF1Q96PN7 1200 aa12.02□□□□□ -0.49
TRAPPC4-201ENST00000359005 C7orf25Q9BPX7 421 aa12.02□□□□□ -0.49
TRAPPC4-201ENST00000359005 TEX13BQ9BXU2 312 aa12.02□□□□□ -0.49
TRAPPC4-201ENST00000359005 CRISPLD2Q9H0B8 497 aa12.02□□□□□ -0.49
TRAPPC4-201ENST00000359005 EXOC1Q9NV70 894 aa12.02□□□□□ -0.49
TRAPPC4-201ENST00000359005 FBXO28Q9NVF7 368 aa12.02□□□□□ -0.49
TRAPPC4-201ENST00000359005 FLRT1Q9NZU1 646 aa12.02□□□□□ -0.49
TRAPPC4-201ENST00000359005 PCDH10Q9P2E7 1040 aa12.02□□□□□ -0.49
TRAPPC4-201ENST00000359005 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC4-201ENST00000359005 BICDL2A1A5D9 508 aa12.01□□□□□ -0.49
TRAPPC4-201ENST00000359005 MAFGO15525 162 aa12.01□□□□□ -0.49
TRAPPC4-201ENST00000359005 STAM2O75886 525 aa12.01□□□□□ -0.49
TRAPPC4-201ENST00000359005 FGFR1OPO95684 399 aaKnown RBP12.01□□□□□ -0.49
TRAPPC4-201ENST00000359005 SERPINC1P01008 464 aa12.01□□□□□ -0.49
TRAPPC4-201ENST00000359005 TPM2P07951 284 aa12.01□□□□□ -0.49
TRAPPC4-201ENST00000359005 HOXA13P31271 388 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC4-201ENST00000359005 ZNF75DP51815 510 aa12.01□□□□□ -0.49
TRAPPC4-201ENST00000359005 FILIP1LQ4L180 1135 aa12.01□□□□□ -0.49
TRAPPC4-201ENST00000359005 HYIQ5T013 277 aa12.01□□□□□ -0.49
TRAPPC4-201ENST00000359005 MAP3K21Q5TCX8 1036 aa12.01□□□□□ -0.49
TRAPPC4-201ENST00000359005 PLEKHH3Q7Z736 793 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms