RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 USP17L17D6RBQ6 530 aa14.11□□□□□ -0.15
RTFDC1-202ENST00000357348 USP17L19D6RCP7 530 aa14.11□□□□□ -0.15
RTFDC1-202ENST00000357348 USP17L20D6RJB6 530 aa14.11□□□□□ -0.15
RTFDC1-202ENST00000357348 N4BP1O75113 896 aaKnown RBP14.11□□□□□ -0.15
RTFDC1-202ENST00000357348 CALML3P27482 149 aa14.11□□□□□ -0.15
RTFDC1-202ENST00000357348 USP17L24Q0WX57 530 aa14.11□□□□□ -0.15
RTFDC1-202ENST00000357348 USP17L6PQ6QN14 398 aa14.11□□□□□ -0.15
RTFDC1-202ENST00000357348 ERO1BQ86YB8 467 aa14.11□□□□□ -0.15
RTFDC1-202ENST00000357348 SLC10A4Q96EP9 437 aa14.11□□□□□ -0.15
RTFDC1-202ENST00000357348 SLF1Q9BQI6 1058 aa14.11□□□□□ -0.15
RTFDC1-202ENST00000357348 AMNQ9BXJ7 453 aa14.11□□□□□ -0.15
RTFDC1-202ENST00000357348 ZMYND12Q9H0C1 365 aa14.11□□□□□ -0.15
RTFDC1-202ENST00000357348 GBA2Q9HCG7 927 aaPredicted RBP14.11□□□□□ -0.15
RTFDC1-202ENST00000357348 C6orf50Q9HD87 102 aa14.11□□□□□ -0.15
RTFDC1-202ENST00000357348 ABHD10Q9NUJ1 306 aa14.11□□□□□ -0.15
RTFDC1-202ENST00000357348 PCDHA6Q9UN73 950 aa14.11□□□□□ -0.15
RTFDC1-202ENST00000357348 PCDHA8Q9Y5H6 950 aa14.11□□□□□ -0.15
RTFDC1-202ENST00000357348 COL11A1P12107 1806 aaPredicted RBP14.11□□□□□ -0.15
RTFDC1-202ENST00000357348 C19orf81C9J6K1 198 aa14.1□□□□□ -0.15
RTFDC1-202ENST00000357348 TRIM66O15016 1216 aa14.1□□□□□ -0.15
RTFDC1-202ENST00000357348 PEX10O60683 326 aa14.1□□□□□ -0.15
RTFDC1-202ENST00000357348 CST9Q5W186 159 aa14.1□□□□□ -0.15
RTFDC1-202ENST00000357348 CHADLQ6NUI6 762 aa14.1□□□□□ -0.15
RTFDC1-202ENST00000357348 CYP26C1Q6V0L0 522 aa14.1□□□□□ -0.15
RTFDC1-202ENST00000357348 PRPF38AQ8NAV1 312 aaKnown RBP14.1□□□□□ -0.15
RTFDC1-202ENST00000357348 ATG4CQ96DT6 458 aa14.1□□□□□ -0.15
RTFDC1-202ENST00000357348 AGBL1Q96MI9 1066 aa14.1□□□□□ -0.15
RTFDC1-202ENST00000357348 SUGCTQ9HAC7 445 aa14.1□□□□□ -0.15
RTFDC1-202ENST00000357348 HOMER2Q9NSB8 354 aa14.1□□□□□ -0.15
RTFDC1-202ENST00000357348 ITGBL1O95965 494 aaPredicted RBP14.1□□□□□ -0.15
RTFDC1-202ENST00000357348 BMP15O95972 392 aa14.1□□□□□ -0.15
RTFDC1-202ENST00000357348 NOP2P46087 812 aaKnown RBP14.1□□□□□ -0.15
RTFDC1-202ENST00000357348 ADCY7P51828 1080 aa14.1□□□□□ -0.15
RTFDC1-202ENST00000357348 PPATQ06203 517 aa14.1□□□□□ -0.15
RTFDC1-202ENST00000357348 FAM160B2Q86V87 743 aa14.1□□□□□ -0.15
RTFDC1-202ENST00000357348 ACRBPQ8NEB7 543 aa14.1□□□□□ -0.15
RTFDC1-202ENST00000357348 TNFRSF25Q93038 417 aa14.1□□□□□ -0.15
RTFDC1-202ENST00000357348 FERMT2Q96AC1 680 aa14.1□□□□□ -0.15
RTFDC1-202ENST00000357348 ACBD3Q9H3P7 528 aa14.1□□□□□ -0.15
RTFDC1-202ENST00000357348 RAVER2Q9HCJ3 691 aaKnown RBP14.1□□□□□ -0.15
RTFDC1-202ENST00000357348 PARP14Q460N5 1801 aa14.1□□□□□ -0.15
RTFDC1-202ENST00000357348 CCDC194A0A1B0GVG4 234 aa14.09□□□□□ -0.15
RTFDC1-202ENST00000357348 SPDYE5A6NIY4 337 aa14.09□□□□□ -0.15
RTFDC1-202ENST00000357348 ABL1P00519 1130 aa14.09□□□□□ -0.15
RTFDC1-202ENST00000357348 GNA11P29992 359 aa14.09□□□□□ -0.15
RTFDC1-202ENST00000357348 GJA5P36382 358 aa14.09□□□□□ -0.15
RTFDC1-202ENST00000357348 SPAG1Q07617 926 aa14.09□□□□□ -0.15
RTFDC1-202ENST00000357348 INF2Q27J81 1249 aa14.09□□□□□ -0.15
RTFDC1-202ENST00000357348 ZNF662Q6ZS27 426 aa14.09□□□□□ -0.15
RTFDC1-202ENST00000357348 C2orf69Q8N8R5 385 aa14.09□□□□□ -0.15
RTFDC1-202ENST00000357348 CPLX3Q8WVH0 158 aa14.09□□□□□ -0.15
RTFDC1-202ENST00000357348 RANBP17Q9H2T7 1088 aaKnown RBP14.09□□□□□ -0.15
RTFDC1-202ENST00000357348 PSTPIP2Q9H939 334 aa14.09□□□□□ -0.15
RTFDC1-202ENST00000357348 MYO6Q9UM54 1294 aa14.09□□□□□ -0.15
RTFDC1-202ENST00000357348 LRRIQ3A6PVS8 624 aaPredicted RBP14.09□□□□□ -0.15
RTFDC1-202ENST00000357348 RHOXF2BP0C7M4 288 aa14.09□□□□□ -0.15
RTFDC1-202ENST00000357348 HOXA13P31271 388 aaPredicted RBP14.09□□□□□ -0.15
RTFDC1-202ENST00000357348 KRT31Q15323 416 aa14.09□□□□□ -0.15
RTFDC1-202ENST00000357348 ZNF174Q15697 407 aa14.09□□□□□ -0.15
RTFDC1-202ENST00000357348 LDLRAD1Q5T700 205 aa14.09□□□□□ -0.15
RTFDC1-202ENST00000357348 TRAPPC11Q7Z392 1133 aa14.09□□□□□ -0.15
RTFDC1-202ENST00000357348 C10orf67Q8IYJ2 551 aa14.09□□□□□ -0.15
RTFDC1-202ENST00000357348 REXO1Q8N1G1 1221 aaKnown RBP14.09□□□□□ -0.15
RTFDC1-202ENST00000357348 NOA1Q8NC60 698 aaKnown RBP14.09□□□□□ -0.15
RTFDC1-202ENST00000357348 TBC1D5Q92609 795 aa14.09□□□□□ -0.15
RTFDC1-202ENST00000357348 RHOXF2Q9BQY4 288 aa14.09□□□□□ -0.15
RTFDC1-202ENST00000357348 RSPH14Q9UHP6 348 aa14.09□□□□□ -0.15
RTFDC1-202ENST00000357348 PPP1R9AQ9ULJ8 1098 aa14.09□□□□□ -0.15
RTFDC1-202ENST00000357348 CTDP1Q9Y5B0 961 aaPredicted RBP14.09□□□□□ -0.15
RTFDC1-202ENST00000357348 M0R2N6 131 aa14.08□□□□□ -0.16
RTFDC1-202ENST00000357348 PRPF6O94906 941 aaKnown RBP14.08□□□□□ -0.16
RTFDC1-202ENST00000357348 STX17P56962 302 aa14.08□□□□□ -0.16
RTFDC1-202ENST00000357348 LRRC31Q6UY01 552 aa14.08□□□□□ -0.16
RTFDC1-202ENST00000357348 RBM46Q8TBY0 533 aaKnown RBP14.08□□□□□ -0.16
RTFDC1-202ENST00000357348 EPSTI1Q96J88 318 aa14.08□□□□□ -0.16
RTFDC1-202ENST00000357348 RWDD2AQ9UIY3 292 aa14.08□□□□□ -0.16
RTFDC1-202ENST00000357348 RLFQ13129 1914 aa14.08□□□□□ -0.16
RTFDC1-202ENST00000357348 hCG_1984214I3L0E3 225 aa14.07□□□□□ -0.16
RTFDC1-202ENST00000357348 RNF225M0QZC1 329 aaPredicted RBP14.07□□□□□ -0.16
RTFDC1-202ENST00000357348 CFBP00751 764 aa14.07□□□□□ -0.16
RTFDC1-202ENST00000357348 TFRCP02786 760 aaKnown RBP14.07□□□□□ -0.16
RTFDC1-202ENST00000357348 COPB1P53618 953 aaKnown RBP14.07□□□□□ -0.16
RTFDC1-202ENST00000357348 E2F4Q16254 413 aa14.07□□□□□ -0.16
RTFDC1-202ENST00000357348 ZNF713Q8N859 430 aaPredicted RBP14.07□□□□□ -0.16
RTFDC1-202ENST00000357348 SYMPKQ92797 1274 aaKnown RBP14.07□□□□□ -0.16
RTFDC1-202ENST00000357348 CUL5Q93034 780 aa14.07□□□□□ -0.16
RTFDC1-202ENST00000357348 CCPG1Q9ULG6 757 aa14.07□□□□□ -0.16
RTFDC1-202ENST00000357348 REXO2Q9Y3B8 237 aaKnown RBP14.07□□□□□ -0.16
RTFDC1-202ENST00000357348 ZNF536O15090 1300 aa14.07□□□□□ -0.16
RTFDC1-202ENST00000357348 SYF2O95926 243 aaKnown RBP14.07□□□□□ -0.16
RTFDC1-202ENST00000357348 ALAS1P13196 640 aa14.07□□□□□ -0.16
RTFDC1-202ENST00000357348 MCM3P25205 808 aa14.07□□□□□ -0.16
RTFDC1-202ENST00000357348 MCM7P33993 719 aa14.07□□□□□ -0.16
RTFDC1-202ENST00000357348 MAGEA9P43362 315 aa14.07□□□□□ -0.16
RTFDC1-202ENST00000357348 AFMP43652 599 aa14.07□□□□□ -0.16
RTFDC1-202ENST00000357348 PLS1Q14651 629 aa14.07□□□□□ -0.16
RTFDC1-202ENST00000357348 HSP90B2PQ58FF3 399 aa14.07□□□□□ -0.16
RTFDC1-202ENST00000357348 KLHL10Q6JEL2 608 aa14.07□□□□□ -0.16
RTFDC1-202ENST00000357348 CATSPERGQ6ZRH7 1159 aa14.07□□□□□ -0.16
RTFDC1-202ENST00000357348 C12orf42Q96LP6 360 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms