RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 MTMR6Q9Y217 621 aa6.99□□□□□ -1.29
UPF2-201ENST00000356352 KDM5DQ9BY66 1539 aa6.98□□□□□ -1.29
UPF2-201ENST00000356352 PDE8BO95263 885 aa6.98□□□□□ -1.29
UPF2-201ENST00000356352 FGAP02671 866 aa6.98□□□□□ -1.29
UPF2-201ENST00000356352 PYGLP06737 847 aa6.98□□□□□ -1.29
UPF2-201ENST00000356352 SYDE2Q5VT97 1194 aa6.98□□□□□ -1.29
UPF2-201ENST00000356352 GPIHBP1Q8IV16 184 aa6.98□□□□□ -1.29
UPF2-201ENST00000356352 GIMAP8Q8ND71 665 aaPredicted RBP6.98□□□□□ -1.29
UPF2-201ENST00000356352 DEPDC1BQ8WUY9 529 aa6.98□□□□□ -1.29
UPF2-201ENST00000356352 FAM149B1Q96BN6 582 aa6.98□□□□□ -1.29
UPF2-201ENST00000356352 PGBD1Q96JS3 809 aa6.98□□□□□ -1.29
UPF2-201ENST00000356352 CCDC138Q96M89 665 aa6.98□□□□□ -1.29
UPF2-201ENST00000356352 COPRSQ9NQ92 184 aa6.98□□□□□ -1.29
UPF2-201ENST00000356352 TEKT2Q9UIF3 430 aa6.98□□□□□ -1.29
UPF2-201ENST00000356352 PTPN22Q9Y2R2 807 aa6.98□□□□□ -1.29
UPF2-201ENST00000356352 ZNF500O60304 480 aaPredicted RBP6.98□□□□□ -1.29
UPF2-201ENST00000356352 SERPING1P05155 500 aa6.98□□□□□ -1.29
UPF2-201ENST00000356352 BMP3P12645 472 aa6.98□□□□□ -1.29
UPF2-201ENST00000356352 GCKP35557 465 aa6.98□□□□□ -1.29
UPF2-201ENST00000356352 IL6STP40189 918 aaPredicted RBP6.98□□□□□ -1.29
UPF2-201ENST00000356352 IREB2P48200 963 aaKnown RBP6.98□□□□□ -1.29
UPF2-201ENST00000356352 ATP1A2P50993 1020 aa6.98□□□□□ -1.29
UPF2-201ENST00000356352 EPHB1P54762 984 aa6.98□□□□□ -1.29
UPF2-201ENST00000356352 FKBP3Q00688 224 aaKnown RBP6.98□□□□□ -1.29
UPF2-201ENST00000356352 TAF11Q15544 211 aa6.98□□□□□ -1.29
UPF2-201ENST00000356352 DOK7Q18PE1 504 aa6.98□□□□□ -1.29
UPF2-201ENST00000356352 MYLK4Q86YV6 388 aaPredicted RBP6.98□□□□□ -1.29
UPF2-201ENST00000356352 PPWD1Q96BP3 646 aaKnown RBP6.98□□□□□ -1.29
UPF2-201ENST00000356352 ORAI2Q96SN7 254 aa6.98□□□□□ -1.29
UPF2-201ENST00000356352 HNRNPCL2B2RXH8 293 aa6.98□□□□□ -1.29
UPF2-201ENST00000356352 HNRNPCL1O60812 293 aaKnown RBP6.98□□□□□ -1.29
UPF2-201ENST00000356352 SOX5P35711 763 aa6.98□□□□□ -1.29
UPF2-201ENST00000356352 NDUFA8P51970 172 aa6.98□□□□□ -1.29
UPF2-201ENST00000356352 TNFAIP2Q03169 654 aa6.98□□□□□ -1.29
UPF2-201ENST00000356352 ZMYM1Q5SVZ6 1142 aa6.98□□□□□ -1.29
UPF2-201ENST00000356352 CXorf38Q8TB03 319 aa6.98□□□□□ -1.29
UPF2-201ENST00000356352 CEP170P1Q96L14 293 aa6.98□□□□□ -1.29
UPF2-201ENST00000356352 FGD4Q96M96 766 aa6.98□□□□□ -1.29
UPF2-201ENST00000356352 RPF1Q9H9Y2 349 aaKnown RBP6.98□□□□□ -1.29
UPF2-201ENST00000356352 XAB2Q9HCS7 855 aaKnown RBP6.98□□□□□ -1.29
UPF2-201ENST00000356352 MRPL40Q9NQ50 206 aaKnown RBP6.98□□□□□ -1.29
UPF2-201ENST00000356352 PTPRKQ15262 1439 aa6.98□□□□□ -1.29
UPF2-201ENST00000356352 BTBD18B2RXH4 712 aa6.98□□□□□ -1.29
UPF2-201ENST00000356352 SORBS3O60504 671 aa6.98□□□□□ -1.29
UPF2-201ENST00000356352 MX2P20592 715 aa6.98□□□□□ -1.29
UPF2-201ENST00000356352 ELF1P32519 619 aa6.98□□□□□ -1.29
UPF2-201ENST00000356352 PAPOLAP51003 745 aaKnown RBP6.98□□□□□ -1.29
UPF2-201ENST00000356352 JAK3P52333 1124 aa6.98□□□□□ -1.29
UPF2-201ENST00000356352 SESN3P58005 492 aa6.98□□□□□ -1.29
UPF2-201ENST00000356352 TMED2Q15363 201 aa6.98□□□□□ -1.29
UPF2-201ENST00000356352 TMCO4Q5TGY1 634 aa6.98□□□□□ -1.29
UPF2-201ENST00000356352 SPOPLQ6IQ16 392 aa6.98□□□□□ -1.29
UPF2-201ENST00000356352 THEM5Q8N1Q8 247 aa6.98□□□□□ -1.29
UPF2-201ENST00000356352 FBXO18Q8NFZ0 1043 aa6.98□□□□□ -1.29
UPF2-201ENST00000356352 UPF3AQ9H1J1 476 aaKnown RBP6.98□□□□□ -1.29
UPF2-201ENST00000356352 MRPL46Q9H2W6 279 aaKnown RBP6.98□□□□□ -1.29
UPF2-201ENST00000356352 NDUFB9Q9Y6M9 179 aa6.98□□□□□ -1.29
UPF2-201ENST00000356352 ABCA5Q8WWZ7 1642 aa6.98□□□□□ -1.29
UPF2-201ENST00000356352 GNAT1P11488 350 aa6.98□□□□□ -1.29
UPF2-201ENST00000356352 CYP4A11Q02928 519 aa6.98□□□□□ -1.29
UPF2-201ENST00000356352 ART3Q13508 389 aa6.98□□□□□ -1.29
UPF2-201ENST00000356352 RCN2Q14257 317 aa6.98□□□□□ -1.29
UPF2-201ENST00000356352 RASIP1Q5U651 963 aa6.98□□□□□ -1.29
UPF2-201ENST00000356352 CNPY4Q8N129 248 aa6.98□□□□□ -1.29
UPF2-201ENST00000356352 ELMOD1Q8N336 334 aa6.98□□□□□ -1.29
UPF2-201ENST00000356352 TDRD7Q8NHU6 1098 aaKnown RBP6.98□□□□□ -1.29
UPF2-201ENST00000356352 VPS39Q96JC1 886 aa6.98□□□□□ -1.29
UPF2-201ENST00000356352 FAM167AQ96KS9 214 aa6.98□□□□□ -1.29
UPF2-201ENST00000356352 ACTR5Q9H9F9 607 aaPredicted RBP6.98□□□□□ -1.29
UPF2-201ENST00000356352 PARVGQ9HBI0 331 aa6.98□□□□□ -1.29
UPF2-201ENST00000356352 SH3GLB2Q9NR46 395 aa6.98□□□□□ -1.29
UPF2-201ENST00000356352 CARMIL3Q8ND23 1372 aa6.97□□□□□ -1.29
UPF2-201ENST00000356352 M0R2C6 588 aa6.97□□□□□ -1.29
UPF2-201ENST00000356352 IGSF3O75054 1194 aa6.97□□□□□ -1.29
UPF2-201ENST00000356352 TMCC1O94876 653 aa6.97□□□□□ -1.29
UPF2-201ENST00000356352 CASP14P31944 242 aa6.97□□□□□ -1.29
UPF2-201ENST00000356352 ADD1P35611 737 aaKnown RBP6.97□□□□□ -1.29
UPF2-201ENST00000356352 GOLGA8FQ08AF8 430 aa6.97□□□□□ -1.29
UPF2-201ENST00000356352 GOLGA8DPQ0D2H9 430 aa6.97□□□□□ -1.29
UPF2-201ENST00000356352 KRT33BQ14525 404 aa6.97□□□□□ -1.29
UPF2-201ENST00000356352 TAF1BQ53T94 588 aaPredicted RBP6.97□□□□□ -1.29
UPF2-201ENST00000356352 OR6B2Q6IFH4 312 aa6.97□□□□□ -1.29
UPF2-201ENST00000356352 PCGF5Q86SE9 256 aa6.97□□□□□ -1.29
UPF2-201ENST00000356352 CMTR1Q8N1G2 835 aaKnown RBP6.97□□□□□ -1.29
UPF2-201ENST00000356352 PPP1R13BQ96KQ4 1090 aa6.97□□□□□ -1.29
UPF2-201ENST00000356352 GDAP1L1Q96MZ0 367 aa6.97□□□□□ -1.29
UPF2-201ENST00000356352 PLEKHA4Q9H4M7 779 aa6.97□□□□□ -1.29
UPF2-201ENST00000356352 BCL2L12Q9HB09 334 aa6.97□□□□□ -1.29
UPF2-201ENST00000356352 TRPC5Q9UL62 973 aaPredicted RBP6.97□□□□□ -1.29
UPF2-201ENST00000356352 CLASP1Q7Z460 1538 aa6.97□□□□□ -1.29
UPF2-201ENST00000356352 ARHGDIAP52565 204 aa6.97□□□□□ -1.29
UPF2-201ENST00000356352 PTH1RQ03431 593 aa6.97□□□□□ -1.29
UPF2-201ENST00000356352 ALS2CLQ60I27 953 aa6.97□□□□□ -1.29
UPF2-201ENST00000356352 CENPUQ71F23 418 aa6.97□□□□□ -1.29
UPF2-201ENST00000356352 RHOT2Q8IXI1 618 aa6.97□□□□□ -1.29
UPF2-201ENST00000356352 CCDC24Q8N4L8 307 aa6.97□□□□□ -1.29
UPF2-201ENST00000356352 GCNT4Q9P109 453 aa6.97□□□□□ -1.29
UPF2-201ENST00000356352 TMEM63CQ9P1W3 806 aa6.97□□□□□ -1.29
UPF2-201ENST00000356352 CLIC4Q9Y696 253 aa6.97□□□□□ -1.29
UPF2-201ENST00000356352 PLEKHG1Q9ULL1 1385 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms