RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 GOLGA6L10A6NI86 522 aa11.14□□□□□ -0.63
PTPRA-203ENST00000356147 PJA2O43164 708 aa11.14□□□□□ -0.63
PTPRA-203ENST00000356147 HIBADHP31937 336 aaKnown RBP11.14□□□□□ -0.63
PTPRA-203ENST00000356147 TNNI2P48788 182 aa11.14□□□□□ -0.63
PTPRA-203ENST00000356147 SETQ01105 290 aaPredicted RBP11.14□□□□□ -0.63
PTPRA-203ENST00000356147 UBE4AQ14139 1066 aa11.14□□□□□ -0.63
PTPRA-203ENST00000356147 UNC13DQ70J99 1090 aa11.14□□□□□ -0.63
PTPRA-203ENST00000356147 ZKSCAN4Q969J2 545 aaPredicted RBP11.14□□□□□ -0.63
PTPRA-203ENST00000356147 ATP8A2Q9NTI2 1148 aa11.14□□□□□ -0.63
PTPRA-203ENST00000356147 HAUS2Q9NVX0 235 aa11.14□□□□□ -0.63
PTPRA-203ENST00000356147 BCL9O00512 1426 aa11.14□□□□□ -0.63
PTPRA-203ENST00000356147 GOLGA6L7A0A1B0GV03 622 aa11.14□□□□□ -0.63
PTPRA-203ENST00000356147 TULP1O00294 542 aaPredicted RBP11.14□□□□□ -0.63
PTPRA-203ENST00000356147 DNM1LO00429 736 aa11.14□□□□□ -0.63
PTPRA-203ENST00000356147 DAPK3O43293 454 aa11.14□□□□□ -0.63
PTPRA-203ENST00000356147 CDC37Q16543 378 aaPredicted RBP11.14□□□□□ -0.63
PTPRA-203ENST00000356147 UBE2SQ16763 222 aa11.14□□□□□ -0.63
PTPRA-203ENST00000356147 C12orf60Q5U649 245 aa11.14□□□□□ -0.63
PTPRA-203ENST00000356147 TAF4BQ92750 862 aa11.14□□□□□ -0.63
PTPRA-203ENST00000356147 SLC40A1Q9NP59 571 aa11.14□□□□□ -0.63
PTPRA-203ENST00000356147 SH3GLB2Q9NR46 395 aa11.14□□□□□ -0.63
PTPRA-203ENST00000356147 KLC4Q9NSK0 619 aa11.14□□□□□ -0.63
PTPRA-203ENST00000356147 FBXL5Q9UKA1 691 aa11.14□□□□□ -0.63
PTPRA-203ENST00000356147 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.14□□□□□ -0.63
PTPRA-203ENST00000356147 GCOM1H8Y6P7 765 aaPredicted RBP11.13□□□□□ -0.63
PTPRA-203ENST00000356147 MARCH6O60337 910 aa11.13□□□□□ -0.63
PTPRA-203ENST00000356147 MYZAPP0CAP1 466 aa11.13□□□□□ -0.63
PTPRA-203ENST00000356147 USP8P40818 1118 aa11.13□□□□□ -0.63
PTPRA-203ENST00000356147 NAB2Q15742 525 aa11.13□□□□□ -0.63
PTPRA-203ENST00000356147 MEI1Q5TIA1 1274 aa11.13□□□□□ -0.63
PTPRA-203ENST00000356147 USP38Q8NB14 1042 aa11.13□□□□□ -0.63
PTPRA-203ENST00000356147 UHMK1Q8TAS1 419 aaKnown RBP11.13□□□□□ -0.63
PTPRA-203ENST00000356147 OSBPL7Q9BZF2 842 aa11.13□□□□□ -0.63
PTPRA-203ENST00000356147 DDX20Q9UHI6 824 aaKnown RBP11.13□□□□□ -0.63
PTPRA-203ENST00000356147 E9PMD0 336 aa11.13□□□□□ -0.63
PTPRA-203ENST00000356147 FSBPO95073 299 aa11.13□□□□□ -0.63
PTPRA-203ENST00000356147 SLC9A1P19634 815 aa11.13□□□□□ -0.63
PTPRA-203ENST00000356147 PRPHP41219 470 aa11.13□□□□□ -0.63
PTPRA-203ENST00000356147 RPS6KA1Q15418 735 aa11.13□□□□□ -0.63
PTPRA-203ENST00000356147 CCDC121Q6ZUS5 278 aa11.13□□□□□ -0.63
PTPRA-203ENST00000356147 DGKHQ86XP1 1220 aa11.13□□□□□ -0.63
PTPRA-203ENST00000356147 REXO1Q8N1G1 1221 aaKnown RBP11.13□□□□□ -0.63
PTPRA-203ENST00000356147 AK8Q96MA6 479 aa11.13□□□□□ -0.63
PTPRA-203ENST00000356147 ZMYND12Q9H0C1 365 aa11.13□□□□□ -0.63
PTPRA-203ENST00000356147 CUEDC2Q9H467 287 aa11.13□□□□□ -0.63
PTPRA-203ENST00000356147 ATP6V0A2Q9Y487 856 aa11.13□□□□□ -0.63
PTPRA-203ENST00000356147 SHANK3Q9BYB0 1731 aa11.13□□□□□ -0.63
PTPRA-203ENST00000356147 PALM3A6NDB9 673 aaPredicted RBP11.13□□□□□ -0.63
PTPRA-203ENST00000356147 FAM107AO95990 144 aa11.13□□□□□ -0.63
PTPRA-203ENST00000356147 SERPING1P05155 500 aa11.13□□□□□ -0.63
PTPRA-203ENST00000356147 PCP11498 1178 aaKnown RBP11.13□□□□□ -0.63
PTPRA-203ENST00000356147 ECHS1P30084 290 aa11.13□□□□□ -0.63
PTPRA-203ENST00000356147 RDXP35241 583 aaKnown RBP11.13□□□□□ -0.63
PTPRA-203ENST00000356147 EPS15P42566 896 aa11.13□□□□□ -0.63
PTPRA-203ENST00000356147 MAGOHP61326 146 aaKnown RBP11.13□□□□□ -0.63
PTPRA-203ENST00000356147 PTK2Q05397 1052 aa11.13□□□□□ -0.63
PTPRA-203ENST00000356147 ZNF844Q08AG5 666 aa11.13□□□□□ -0.63
PTPRA-203ENST00000356147 KRT25Q7Z3Z0 450 aa11.13□□□□□ -0.63
PTPRA-203ENST00000356147 MYOCDQ8IZQ8 938 aa11.13□□□□□ -0.63
PTPRA-203ENST00000356147 GUF1Q8N442 669 aaKnown RBP11.13□□□□□ -0.63
PTPRA-203ENST00000356147 MAGOHBQ96A72 148 aaKnown RBP11.13□□□□□ -0.63
PTPRA-203ENST00000356147 TAF1DQ9H5J8 278 aaPredicted RBP11.13□□□□□ -0.63
PTPRA-203ENST00000356147 TMBIM4Q9HC24 238 aa11.13□□□□□ -0.63
PTPRA-203ENST00000356147 C6orf50Q9HD87 102 aa11.13□□□□□ -0.63
PTPRA-203ENST00000356147 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.13□□□□□ -0.63
PTPRA-203ENST00000356147 COL4A3BPQ9Y5P4 624 aa11.13□□□□□ -0.63
PTPRA-203ENST00000356147 USP17L5A8MUK1 530 aa11.12□□□□□ -0.63
PTPRA-203ENST00000356147 TTI1O43156 1089 aa11.12□□□□□ -0.63
PTPRA-203ENST00000356147 SART1O43290 800 aaKnown RBP11.12□□□□□ -0.63
PTPRA-203ENST00000356147 COASYQ13057 564 aa11.12□□□□□ -0.63
PTPRA-203ENST00000356147 GJB7Q6PEY0 223 aa11.12□□□□□ -0.63
PTPRA-203ENST00000356147 MICALCLQ6ZW33 695 aa11.12□□□□□ -0.63
PTPRA-203ENST00000356147 FBXO33Q7Z6M2 555 aa11.12□□□□□ -0.63
PTPRA-203ENST00000356147 TSG101Q99816 390 aa11.12□□□□□ -0.63
PTPRA-203ENST00000356147 BCAS3Q9H6U6 928 aa11.12□□□□□ -0.63
PTPRA-203ENST00000356147 SEC63Q9UGP8 760 aaKnown RBP11.12□□□□□ -0.63
PTPRA-203ENST00000356147 LRP5O75197 1615 aa11.12□□□□□ -0.63
PTPRA-203ENST00000356147 GSCP56915 257 aaPredicted RBP11.12□□□□□ -0.63
PTPRA-203ENST00000356147 TNNC1P63316 161 aa11.12□□□□□ -0.63
PTPRA-203ENST00000356147 MKRN4PQ13434 485 aaPredicted RBP11.12□□□□□ -0.63
PTPRA-203ENST00000356147 PRPF4BQ13523 1007 aaKnown RBP11.12□□□□□ -0.63
PTPRA-203ENST00000356147 SLC18A3Q16572 532 aa11.12□□□□□ -0.63
PTPRA-203ENST00000356147 PARP10Q53GL7 1025 aa11.12□□□□□ -0.63
PTPRA-203ENST00000356147 GLE1Q53GS7 698 aaKnown RBP11.12□□□□□ -0.63
PTPRA-203ENST00000356147 LRRC47Q8N1G4 583 aaKnown RBP11.12□□□□□ -0.63
PTPRA-203ENST00000356147 RNF10Q8N5U6 811 aaKnown RBP11.12□□□□□ -0.63
PTPRA-203ENST00000356147 MARCH10Q8NA82 808 aaPredicted RBP11.12□□□□□ -0.63
PTPRA-203ENST00000356147 ANKS1AQ92625 1134 aa11.12□□□□□ -0.63
PTPRA-203ENST00000356147 TRIM51Q9BSJ1 452 aa11.12□□□□□ -0.63
PTPRA-203ENST00000356147 VCPKMTQ9H867 229 aa11.12□□□□□ -0.63
PTPRA-203ENST00000356147 GPCPD1Q9NPB8 672 aa11.12□□□□□ -0.63
PTPRA-203ENST00000356147 BSDC1Q9NW68 430 aaPredicted RBP11.12□□□□□ -0.63
PTPRA-203ENST00000356147 NR2E1Q9Y466 385 aa11.12□□□□□ -0.63
PTPRA-203ENST00000356147 LOC102724428A0A0B4J2F2 783 aa11.11□□□□□ -0.63
PTPRA-203ENST00000356147 SSU72P8A0A1W2PR75 194 aa11.11□□□□□ -0.63
PTPRA-203ENST00000356147 TLDC2A0PJX2 215 aa11.11□□□□□ -0.63
PTPRA-203ENST00000356147 GMNCA6NCL1 334 aa11.11□□□□□ -0.63
PTPRA-203ENST00000356147 LAD1O00515 517 aa11.11□□□□□ -0.63
PTPRA-203ENST00000356147 EDIL3O43854 480 aa11.11□□□□□ -0.63
PTPRA-203ENST00000356147 RAD21O60216 631 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms