RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 LRRC14Q15048 493 aa14.92□□□□□ -0.02
TRIM4-203ENST00000355947 GKAP1Q5VSY0 366 aaPredicted RBP14.92□□□□□ -0.02
TRIM4-203ENST00000355947 KCNK18Q7Z418 384 aa14.92□□□□□ -0.02
TRIM4-203ENST00000355947 MYOCDQ8IZQ8 938 aa14.92□□□□□ -0.02
TRIM4-203ENST00000355947 ERGIC2Q96RQ1 377 aa14.92□□□□□ -0.02
TRIM4-203ENST00000355947 MARF1Q9Y4F3 1742 aaKnown RBP14.92□□□□□ -0.02
TRIM4-203ENST00000355947 MEIS1O00470 390 aa14.91□□□□□ -0.02
TRIM4-203ENST00000355947 MYBL1P10243 752 aa14.91□□□□□ -0.02
TRIM4-203ENST00000355947 PAX7P23759 505 aa14.91□□□□□ -0.02
TRIM4-203ENST00000355947 ELF1P32519 619 aa14.91□□□□□ -0.02
TRIM4-203ENST00000355947 PLTPP55058 493 aa14.91□□□□□ -0.02
TRIM4-203ENST00000355947 PICALMQ13492 652 aa14.91□□□□□ -0.02
TRIM4-203ENST00000355947 ZKSCAN8Q15776 578 aaPredicted RBP14.91□□□□□ -0.02
TRIM4-203ENST00000355947 KDM7AQ6ZMT4 941 aa14.91□□□□□ -0.02
TRIM4-203ENST00000355947 PARP9Q8IXQ6 854 aa14.91□□□□□ -0.02
TRIM4-203ENST00000355947 IQCKQ8N0W5 287 aa14.91□□□□□ -0.02
TRIM4-203ENST00000355947 REXO1Q8N1G1 1221 aaKnown RBP14.91□□□□□ -0.02
TRIM4-203ENST00000355947 ELAC2Q9BQ52 826 aaKnown RBP14.91□□□□□ -0.02
TRIM4-203ENST00000355947 LBHD1Q9BQE6 289 aaPredicted RBP14.91□□□□□ -0.02
TRIM4-203ENST00000355947 ANKIB1Q9P2G1 1089 aa14.91□□□□□ -0.02
TRIM4-203ENST00000355947 CYB5D1Q6P9G0 228 aa14.91□□□□□ -0.02
TRIM4-203ENST00000355947 GJB7Q6PEY0 223 aa14.91□□□□□ -0.02
TRIM4-203ENST00000355947 TMED8Q6PL24 325 aaPredicted RBP14.91□□□□□ -0.02
TRIM4-203ENST00000355947 MAEAQ7L5Y9 396 aa14.91□□□□□ -0.02
TRIM4-203ENST00000355947 HVCN1Q96D96 273 aa14.91□□□□□ -0.02
TRIM4-203ENST00000355947 SEC16BQ96JE7 1060 aa14.91□□□□□ -0.02
TRIM4-203ENST00000355947 FGFBP2Q9BYJ0 223 aa14.91□□□□□ -0.02
TRIM4-203ENST00000355947 NEUROG2Q9H2A3 272 aa14.91□□□□□ -0.02
TRIM4-203ENST00000355947 CEP83Q9Y592 693 aa14.91□□□□□ -0.02
TRIM4-203ENST00000355947 E9PMD0 336 aa14.91□□□□□ -0.02
TRIM4-203ENST00000355947 F8W031 263 aaPredicted RBP14.91□□□□□ -0.02
TRIM4-203ENST00000355947 DNM1LO00429 736 aa14.91□□□□□ -0.02
TRIM4-203ENST00000355947 FAM107AO95990 144 aa14.91□□□□□ -0.02
TRIM4-203ENST00000355947 ERFEQ4G0M1 354 aa14.91□□□□□ -0.02
TRIM4-203ENST00000355947 TAF1DQ9H5J8 278 aaPredicted RBP14.91□□□□□ -0.02
TRIM4-203ENST00000355947 LRRC4CQ9HCJ2 640 aa14.91□□□□□ -0.02
TRIM4-203ENST00000355947 SIK3Q9Y2K2 1263 aa14.91□□□□□ -0.02
TRIM4-203ENST00000355947 L3MBTL1Q9Y468 752 aa14.91□□□□□ -0.02
TRIM4-203ENST00000355947 PCDHB13Q9Y5F0 798 aa14.91□□□□□ -0.02
TRIM4-203ENST00000355947 TNS3Q68CZ2 1445 aa14.91□□□□□ -0.02
TRIM4-203ENST00000355947 SLC9A1P19634 815 aa14.9□□□□□ -0.02
TRIM4-203ENST00000355947 PLS1Q14651 629 aa14.9□□□□□ -0.02
TRIM4-203ENST00000355947 TEX11Q8IYF3 940 aa14.9□□□□□ -0.02
TRIM4-203ENST00000355947 RAPGEF5Q92565 580 aa14.9□□□□□ -0.02
TRIM4-203ENST00000355947 CNOT8Q9UFF9 292 aaKnown RBP14.9□□□□□ -0.02
TRIM4-203ENST00000355947 HMGB1P1B2RPK0 211 aaPredicted RBP14.9□□□□□ -0.02
TRIM4-203ENST00000355947 CLIC2O15247 247 aa14.9□□□□□ -0.02
TRIM4-203ENST00000355947 UPP2O95045 317 aa14.9□□□□□ -0.02
TRIM4-203ENST00000355947 FAM26FQ5R3K3 315 aa14.9□□□□□ -0.02
TRIM4-203ENST00000355947 ANKRD42Q8N9B4 389 aa14.9□□□□□ -0.02
TRIM4-203ENST00000355947 FAM84BQ96KN1 310 aaPredicted RBP14.9□□□□□ -0.02
TRIM4-203ENST00000355947 VCPKMTQ9H867 229 aa14.9□□□□□ -0.02
TRIM4-203ENST00000355947 PANK4Q9NVE7 773 aa14.9□□□□□ -0.02
TRIM4-203ENST00000355947 ARPP21Q9UBL0 812 aaPredicted RBP14.9□□□□□ -0.02
TRIM4-203ENST00000355947 SKOR1P84550 965 aa14.9□□□□□ -0.02
TRIM4-203ENST00000355947 ADAM9Q13443 819 aa14.9□□□□□ -0.02
TRIM4-203ENST00000355947 RCSD1Q6JBY9 416 aa14.9□□□□□ -0.02
TRIM4-203ENST00000355947 ZNF384Q8TF68 577 aa14.9□□□□□ -0.02
TRIM4-203ENST00000355947 LRRC45Q96CN5 670 aa14.9□□□□□ -0.02
TRIM4-203ENST00000355947 TMEM47Q9BQJ4 181 aa14.9□□□□□ -0.02
TRIM4-203ENST00000355947 CCSER1Q9C0I3 900 aa14.9□□□□□ -0.02
TRIM4-203ENST00000355947 IL17RBQ9NRM6 502 aa14.9□□□□□ -0.02
TRIM4-203ENST00000355947 TPX2Q9ULW0 747 aaKnown RBP14.9□□□□□ -0.02
TRIM4-203ENST00000355947 SNX24Q9Y343 169 aa14.9□□□□□ -0.02
TRIM4-203ENST00000355947 COL4A3BPQ9Y5P4 624 aa14.9□□□□□ -0.02
TRIM4-203ENST00000355947 TMEM94Q12767 1356 aa14.89□□□□□ -0.03
TRIM4-203ENST00000355947 C1orf167Q5SNV9 1468 aa14.89□□□□□ -0.03
TRIM4-203ENST00000355947 SPDYE3A6NKU9 549 aa14.89□□□□□ -0.03
TRIM4-203ENST00000355947 SLC37A4O43826 429 aa14.89□□□□□ -0.03
TRIM4-203ENST00000355947 TLR2O60603 784 aa14.89□□□□□ -0.03
TRIM4-203ENST00000355947 HIBADHP31937 336 aaKnown RBP14.89□□□□□ -0.03
TRIM4-203ENST00000355947 SLC16A2P36021 539 aa14.89□□□□□ -0.03
TRIM4-203ENST00000355947 RDH13Q8NBN7 331 aa14.89□□□□□ -0.03
TRIM4-203ENST00000355947 SH3RF3Q8TEJ3 882 aaPredicted RBP14.89□□□□□ -0.03
TRIM4-203ENST00000355947 PAIP2Q9BPZ3 127 aaKnown RBP14.89□□□□□ -0.03
TRIM4-203ENST00000355947 KIAA1024Q9UPX6 916 aa14.89□□□□□ -0.03
TRIM4-203ENST00000355947 PTPN22Q9Y2R2 807 aa14.89□□□□□ -0.03
TRIM4-203ENST00000355947 LEMD3Q9Y2U8 911 aa14.89□□□□□ -0.03
TRIM4-203ENST00000355947 NOC2LQ9Y3T9 749 aaKnown RBP14.89□□□□□ -0.03
TRIM4-203ENST00000355947 BAZ2AQ9UIF9 1905 aaKnown RBP14.89□□□□□ -0.03
TRIM4-203ENST00000355947 GOLGB1Q14789 3259 aaKnown RBP14.89□□□□□ -0.03
TRIM4-203ENST00000355947 GRID2IPA4D2P6 1211 aa14.89□□□□□ -0.03
TRIM4-203ENST00000355947 FGGP02679 453 aa14.89□□□□□ -0.03
TRIM4-203ENST00000355947 KIF2BQ8N4N8 673 aa14.89□□□□□ -0.03
TRIM4-203ENST00000355947 GLG1Q92896 1179 aa14.89□□□□□ -0.03
TRIM4-203ENST00000355947 OSBPL7Q9BZF2 842 aa14.89□□□□□ -0.03
TRIM4-203ENST00000355947 SFI1A8K8P3 1242 aa14.88□□□□□ -0.03
TRIM4-203ENST00000355947 MPHOSPH10O00566 681 aaKnown RBP14.88□□□□□ -0.03
TRIM4-203ENST00000355947 SERPING1P05155 500 aa14.88□□□□□ -0.03
TRIM4-203ENST00000355947 FNTAP49354 379 aa14.88□□□□□ -0.03
TRIM4-203ENST00000355947 MAP2K1Q02750 393 aaPredicted RBP14.88□□□□□ -0.03
TRIM4-203ENST00000355947 ITGB3BPQ13352 177 aaPredicted RBP14.88□□□□□ -0.03
TRIM4-203ENST00000355947 SWT1Q5T5J6 900 aaKnown RBP14.88□□□□□ -0.03
TRIM4-203ENST00000355947 TXNRD3Q86VQ6 643 aa14.88□□□□□ -0.03
TRIM4-203ENST00000355947 USP38Q8NB14 1042 aa14.88□□□□□ -0.03
TRIM4-203ENST00000355947 KCNV2Q8TDN2 545 aa14.88□□□□□ -0.03
TRIM4-203ENST00000355947 PIK3R5Q8WYR1 880 aa14.88□□□□□ -0.03
TRIM4-203ENST00000355947 CAVIN3Q969G5 261 aa14.88□□□□□ -0.03
TRIM4-203ENST00000355947 PURBQ96QR8 312 aaKnown RBP14.88□□□□□ -0.03
TRIM4-203ENST00000355947 KCNK9Q9NPC2 374 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms