RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 ZNF518AQ6AHZ1 1483 aa16.07■□□□□ 0.16
LMX1B-201ENST00000355497 YWHAHQ04917 246 aaPredicted RBP16.07■□□□□ 0.16
LMX1B-201ENST00000355497 ABI1Q8IZP0 508 aa16.07■□□□□ 0.16
LMX1B-201ENST00000355497 NEK9Q8TD19 979 aa16.07■□□□□ 0.16
LMX1B-201ENST00000355497 INTUQ9ULD6 942 aa16.07■□□□□ 0.16
LMX1B-201ENST00000355497 G3BP2Q9UN86 482 aaKnown RBP16.07■□□□□ 0.16
LMX1B-201ENST00000355497 NOVA2Q9UNW9 492 aaKnown RBP16.07■□□□□ 0.16
LMX1B-201ENST00000355497 PCDHA5Q9Y5H7 936 aa16.07■□□□□ 0.16
LMX1B-201ENST00000355497 LRRN2O75325 713 aa16.07■□□□□ 0.16
LMX1B-201ENST00000355497 GUCY2CP25092 1073 aa16.07■□□□□ 0.16
LMX1B-201ENST00000355497 SOX5P35711 763 aa16.07■□□□□ 0.16
LMX1B-201ENST00000355497 NOP14P78316 857 aaKnown RBP16.07■□□□□ 0.16
LMX1B-201ENST00000355497 LRRC23Q53EV4 343 aaPredicted RBP16.07■□□□□ 0.16
LMX1B-201ENST00000355497 ASPRV1Q53RT3 343 aa16.07■□□□□ 0.16
LMX1B-201ENST00000355497 KLC3Q6P597 504 aa16.07■□□□□ 0.16
LMX1B-201ENST00000355497 NRBP1Q9UHY1 535 aa16.07■□□□□ 0.16
LMX1B-201ENST00000355497 FAM135BQ49AJ0 1406 aa16.07■□□□□ 0.16
LMX1B-201ENST00000355497 GFPT2O94808 682 aa16.06■□□□□ 0.16
LMX1B-201ENST00000355497 EIF3BP55884 814 aaKnown RBP16.06■□□□□ 0.16
LMX1B-201ENST00000355497 SSH3Q8TE77 659 aa16.06■□□□□ 0.16
LMX1B-201ENST00000355497 IRAK4Q9NWZ3 460 aa16.06■□□□□ 0.16
LMX1B-201ENST00000355497 MAP3K7CLP57077 242 aa16.06■□□□□ 0.16
LMX1B-201ENST00000355497 DR1Q01658 176 aa16.06■□□□□ 0.16
LMX1B-201ENST00000355497 TRIML2Q8N7C3 387 aa16.06■□□□□ 0.16
LMX1B-201ENST00000355497 ZC3H15Q8WU90 426 aaKnown RBP16.06■□□□□ 0.16
LMX1B-201ENST00000355497 GCNT4Q9P109 453 aa16.06■□□□□ 0.16
LMX1B-201ENST00000355497 SUFUQ9UMX1 484 aa16.06■□□□□ 0.16
LMX1B-201ENST00000355497 PRPSAP2O60256 369 aa16.06■□□□□ 0.16
LMX1B-201ENST00000355497 LRRC41Q15345 812 aa16.06■□□□□ 0.16
LMX1B-201ENST00000355497 TRIP13Q15645 432 aaPredicted RBP16.06■□□□□ 0.16
LMX1B-201ENST00000355497 CDC26Q8NHZ8 85 aa16.06■□□□□ 0.16
LMX1B-201ENST00000355497 SLC7A3Q8WY07 619 aa16.06■□□□□ 0.16
LMX1B-201ENST00000355497 NACC1Q96RE7 527 aa16.06■□□□□ 0.16
LMX1B-201ENST00000355497 NHEJ1Q9H9Q4 299 aaPredicted RBP16.06■□□□□ 0.16
LMX1B-201ENST00000355497 UBE2TQ9NPD8 197 aaPredicted RBP16.06■□□□□ 0.16
LMX1B-201ENST00000355497 WDR91A4D1P6 747 aa16.06■□□□□ 0.16
LMX1B-201ENST00000355497 MAPK13O15264 365 aa16.06■□□□□ 0.16
LMX1B-201ENST00000355497 NPR1P16066 1061 aa16.06■□□□□ 0.16
LMX1B-201ENST00000355497 DEUP1Q05D60 604 aa16.06■□□□□ 0.16
LMX1B-201ENST00000355497 EXOC8Q8IYI6 725 aa16.06■□□□□ 0.16
LMX1B-201ENST00000355497 ZNF496Q96IT1 587 aaPredicted RBP16.06■□□□□ 0.16
LMX1B-201ENST00000355497 CALN1Q9BXU9 219 aa16.06■□□□□ 0.16
LMX1B-201ENST00000355497 ZMYND12Q9H0C1 365 aa16.06■□□□□ 0.16
LMX1B-201ENST00000355497 CAPN11Q9UMQ6 739 aa16.06■□□□□ 0.16
LMX1B-201ENST00000355497 PPP1R12AO14974 1030 aaPredicted RBP16.06■□□□□ 0.16
LMX1B-201ENST00000355497 SERPING1P05155 500 aa16.06■□□□□ 0.16
LMX1B-201ENST00000355497 PYGBP11216 843 aa16.06■□□□□ 0.16
LMX1B-201ENST00000355497 NR1D1P20393 614 aa16.06■□□□□ 0.16
LMX1B-201ENST00000355497 RWDD2AQ9UIY3 292 aa16.06■□□□□ 0.16
LMX1B-201ENST00000355497 LMTK3Q96Q04 1460 aa16.05■□□□□ 0.16
LMX1B-201ENST00000355497 COL17A1Q9UMD9 1497 aaPredicted RBP16.05■□□□□ 0.16
LMX1B-201ENST00000355497 ERVV-2B6SEH9 535 aa16.05■□□□□ 0.16
LMX1B-201ENST00000355497 CXCR5P32302 372 aa16.05■□□□□ 0.16
LMX1B-201ENST00000355497 FBXO18Q8NFZ0 1043 aa16.05■□□□□ 0.16
LMX1B-201ENST00000355497 EEF2KMTQ96G04 330 aa16.05■□□□□ 0.16
LMX1B-201ENST00000355497 PCIF1Q9H4Z3 704 aa16.05■□□□□ 0.16
LMX1B-201ENST00000355497 MAN1B1Q9UKM7 699 aa16.05■□□□□ 0.16
LMX1B-201ENST00000355497 ABCC4O15439 1325 aa16.05■□□□□ 0.16
LMX1B-201ENST00000355497 RAPGEF6Q8TEU7 1601 aa16.05■□□□□ 0.16
LMX1B-201ENST00000355497 F8W8V4 182 aa16.05■□□□□ 0.16
LMX1B-201ENST00000355497 LMNAP02545 664 aaKnown RBP16.05■□□□□ 0.16
LMX1B-201ENST00000355497 GLE1Q53GS7 698 aaKnown RBP16.05■□□□□ 0.16
LMX1B-201ENST00000355497 OR6B2Q6IFH4 312 aa16.05■□□□□ 0.16
LMX1B-201ENST00000355497 THAP9Q9H5L6 903 aa16.05■□□□□ 0.16
LMX1B-201ENST00000355497 ABCF3Q9NUQ8 709 aa16.05■□□□□ 0.16
LMX1B-201ENST00000355497 PCDHA13Q9Y5I0 950 aa16.05■□□□□ 0.16
LMX1B-201ENST00000355497 CARMIL3Q8ND23 1372 aa16.05■□□□□ 0.16
LMX1B-201ENST00000355497 KCNA6P17658 529 aa16.05■□□□□ 0.16
LMX1B-201ENST00000355497 C6orf118Q5T5N4 469 aa16.05■□□□□ 0.16
LMX1B-201ENST00000355497 ACRBPQ8NEB7 543 aa16.05■□□□□ 0.16
LMX1B-201ENST00000355497 CLIC2O15247 247 aa16.04■□□□□ 0.16
LMX1B-201ENST00000355497 KCTD2Q14681 263 aa16.04■□□□□ 0.16
LMX1B-201ENST00000355497 ZBTB38Q8NAP3 1195 aaPredicted RBP16.04■□□□□ 0.16
LMX1B-201ENST00000355497 DHX38Q92620 1227 aaKnown RBP16.04■□□□□ 0.16
LMX1B-201ENST00000355497 TTC25Q96NG3 672 aa16.04■□□□□ 0.16
LMX1B-201ENST00000355497 POLR3EQ9NVU0 708 aa16.04■□□□□ 0.16
LMX1B-201ENST00000355497 MYL1P05976 194 aa16.04■□□□□ 0.16
LMX1B-201ENST00000355497 MCF2P10911 925 aa16.04■□□□□ 0.16
LMX1B-201ENST00000355497 OCRLQ01968 901 aa16.04■□□□□ 0.16
LMX1B-201ENST00000355497 ADCY2Q08462 1091 aa16.04■□□□□ 0.16
LMX1B-201ENST00000355497 FAM98CQ17RN3 349 aaKnown RBP16.04■□□□□ 0.16
LMX1B-201ENST00000355497 SMYD4Q8IYR2 804 aaPredicted RBP16.04■□□□□ 0.16
LMX1B-201ENST00000355497 PRPF38AQ8NAV1 312 aaKnown RBP16.04■□□□□ 0.16
LMX1B-201ENST00000355497 EAF2Q96CJ1 260 aaPredicted RBP16.04■□□□□ 0.16
LMX1B-201ENST00000355497 WDR17Q8IZU2 1322 aa16.04■□□□□ 0.16
LMX1B-201ENST00000355497 SPAG7O75391 227 aa16.04■□□□□ 0.16
LMX1B-201ENST00000355497 TAC1P20366 129 aa16.04■□□□□ 0.16
LMX1B-201ENST00000355497 CHRNDQ07001 517 aa16.04■□□□□ 0.16
LMX1B-201ENST00000355497 UBE3CQ15386 1083 aa16.04■□□□□ 0.16
LMX1B-201ENST00000355497 DOK7Q18PE1 504 aa16.04■□□□□ 0.16
LMX1B-201ENST00000355497 GPATCH4Q5T3I0 446 aaKnown RBP16.04■□□□□ 0.16
LMX1B-201ENST00000355497 CENPUQ71F23 418 aa16.04■□□□□ 0.16
LMX1B-201ENST00000355497 RNF26Q9BY78 433 aaPredicted RBP16.04■□□□□ 0.16
LMX1B-201ENST00000355497 SOWAHDA6NJG2 315 aa16.04■□□□□ 0.16
LMX1B-201ENST00000355497 INO80B-WBP1J3KQ70 363 aa16.04■□□□□ 0.16
LMX1B-201ENST00000355497 IPO5O00410 1097 aaKnown RBP16.04■□□□□ 0.16
LMX1B-201ENST00000355497 RAP1GDS1P52306 607 aa16.04■□□□□ 0.16
LMX1B-201ENST00000355497 CACNB1Q02641 598 aaPredicted RBP16.04■□□□□ 0.16
LMX1B-201ENST00000355497 GRAMD1BQ3KR37 738 aa16.04■□□□□ 0.16
LMX1B-201ENST00000355497 SIX6OS1Q8N1H7 587 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms