RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 HLFQ16534 295 aa8.36□□□□□ -1.07
BRCA1-201ENST00000352993 DYMQ7RTS9 669 aa8.36□□□□□ -1.07
BRCA1-201ENST00000352993 LRRC34Q8IZ02 419 aa8.36□□□□□ -1.07
BRCA1-201ENST00000352993 STAG2Q8N3U4 1231 aa8.36□□□□□ -1.07
BRCA1-201ENST00000352993 RNF10Q8N5U6 811 aaKnown RBP8.36□□□□□ -1.07
BRCA1-201ENST00000352993 MAB21L3Q8N8X9 362 aa8.36□□□□□ -1.07
BRCA1-201ENST00000352993 USP38Q8NB14 1042 aa8.36□□□□□ -1.07
BRCA1-201ENST00000352993 GIMAP8Q8ND71 665 aaPredicted RBP8.36□□□□□ -1.07
BRCA1-201ENST00000352993 NSRP1Q9H0G5 558 aaKnown RBP8.36□□□□□ -1.07
BRCA1-201ENST00000352993 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.36□□□□□ -1.077e-7■□□□□ 9.9
BRCA1-201ENST00000352993 AFDNP55196 1824 aaKnown RBP8.35□□□□□ -1.07
BRCA1-201ENST00000352993 IRF6O14896 467 aa8.35□□□□□ -1.07
BRCA1-201ENST00000352993 PPIP5K2O43314 1243 aa8.35□□□□□ -1.07
BRCA1-201ENST00000352993 PDHA1P08559 390 aa8.35□□□□□ -1.07
BRCA1-201ENST00000352993 GHRP10912 638 aa8.35□□□□□ -1.07
BRCA1-201ENST00000352993 SLCO1A2P46721 670 aa8.35□□□□□ -1.07
BRCA1-201ENST00000352993 CDK17Q00537 523 aa8.35□□□□□ -1.07
BRCA1-201ENST00000352993 BYSLQ13895 437 aaKnown RBP8.35□□□□□ -1.07
BRCA1-201ENST00000352993 SLC4A8Q2Y0W8 1093 aa8.35□□□□□ -1.07
BRCA1-201ENST00000352993 BRINP3Q76B58 766 aa8.35□□□□□ -1.07
BRCA1-201ENST00000352993 TRPM8Q7Z2W7 1104 aa8.35□□□□□ -1.07
BRCA1-201ENST00000352993 DAAM2Q86T65 1068 aa8.35□□□□□ -1.07
BRCA1-201ENST00000352993 SPICE1Q8N0Z3 855 aa8.35□□□□□ -1.07
BRCA1-201ENST00000352993 GPKOWQ92917 476 aaPredicted RBP eCLIP8.35□□□□□ -1.07
BRCA1-201ENST00000352993 ERGIC2Q96RQ1 377 aa8.35□□□□□ -1.07
BRCA1-201ENST00000352993 TSC22D3Q99576 134 aa8.35□□□□□ -1.07
BRCA1-201ENST00000352993 OSBPL1AQ9BXW6 950 aa8.35□□□□□ -1.07
BRCA1-201ENST00000352993 ECT2Q9H8V3 914 aa8.35□□□□□ -1.07
BRCA1-201ENST00000352993 ZBTB12Q9Y330 459 aaPredicted RBP8.35□□□□□ -1.07
BRCA1-201ENST00000352993 SRRM3A6NNA2 597 aaPredicted RBP8.35□□□□□ -1.07
BRCA1-201ENST00000352993 IGF2BP3O00425 579 aaKnown RBP eCLIP8.35□□□□□ -1.07
BRCA1-201ENST00000352993 C11orf91Q3C1V1 193 aa8.35□□□□□ -1.07
BRCA1-201ENST00000352993 MIIPQ5JXC2 388 aa8.35□□□□□ -1.07
BRCA1-201ENST00000352993 CHADLQ6NUI6 762 aa8.35□□□□□ -1.07
BRCA1-201ENST00000352993 DNAAF5Q86Y56 855 aa8.35□□□□□ -1.07
BRCA1-201ENST00000352993 PRMT1Q99873 361 aaKnown RBP8.35□□□□□ -1.07
BRCA1-201ENST00000352993 CELF4Q9BZC1 486 aaKnown RBP8.35□□□□□ -1.07
BRCA1-201ENST00000352993 NEUROG2Q9H2A3 272 aa8.35□□□□□ -1.07
BRCA1-201ENST00000352993 CNOT10Q9H9A5 744 aaKnown RBP8.35□□□□□ -1.07
BRCA1-201ENST00000352993 UTP11Q9Y3A2 253 aaKnown RBP8.35□□□□□ -1.07
BRCA1-201ENST00000352993 CYP2D7A0A087X1C5 515 aa8.35□□□□□ -1.07
BRCA1-201ENST00000352993 A0A1W2PQJ5 194 aa8.35□□□□□ -1.07
BRCA1-201ENST00000352993 GRID2IPA4D2P6 1211 aa8.35□□□□□ -1.07
BRCA1-201ENST00000352993 SMIM22K7EJ46 135 aa8.35□□□□□ -1.07
BRCA1-201ENST00000352993 RGS16O15492 202 aaPredicted RBP8.35□□□□□ -1.07
BRCA1-201ENST00000352993 CAND2O75155 1236 aa8.35□□□□□ -1.07
BRCA1-201ENST00000352993 UBOX5O94941 541 aa8.35□□□□□ -1.07
BRCA1-201ENST00000352993 RHOBTB3O94955 611 aa8.35□□□□□ -1.07
BRCA1-201ENST00000352993 PCCAP05165 728 aaPredicted RBP8.35□□□□□ -1.07
BRCA1-201ENST00000352993 UQCRFS1P1P0C7P4 283 aa8.35□□□□□ -1.07
BRCA1-201ENST00000352993 KLHL30Q0D2K2 578 aa8.35□□□□□ -1.07
BRCA1-201ENST00000352993 PSMD2Q13200 908 aa8.35□□□□□ -1.07
BRCA1-201ENST00000352993 NBPF20Q3BBV1 942 aa8.35□□□□□ -1.07
BRCA1-201ENST00000352993 AGBL2Q5U5Z8 902 aa8.35□□□□□ -1.07
BRCA1-201ENST00000352993 SLC30A9Q6PML9 568 aa8.35□□□□□ -1.07
BRCA1-201ENST00000352993 LRP10Q7Z4F1 713 aa8.35□□□□□ -1.07
BRCA1-201ENST00000352993 HOOK3Q86VS8 718 aa8.35□□□□□ -1.07
BRCA1-201ENST00000352993 CCDC26Q8TAB7 109 aa8.35□□□□□ -1.07
BRCA1-201ENST00000352993 PACSIN1Q9BY11 444 aa8.35□□□□□ -1.07
BRCA1-201ENST00000352993 ABCF3Q9NUQ8 709 aa8.35□□□□□ -1.07
BRCA1-201ENST00000352993 A0A0G2JS52 829 aa8.34□□□□□ -1.07
BRCA1-201ENST00000352993 CFAP73A6NFT4 308 aa8.34□□□□□ -1.07
BRCA1-201ENST00000352993 A8MUI8 341 aa8.34□□□□□ -1.07
BRCA1-201ENST00000352993 F8W031 263 aaPredicted RBP8.34□□□□□ -1.07
BRCA1-201ENST00000352993 TTI1O43156 1089 aa8.34□□□□□ -1.07
BRCA1-201ENST00000352993 NQO1P15559 274 aaKnown RBP8.34□□□□□ -1.07
BRCA1-201ENST00000352993 PLCG1P19174 1290 aa8.34□□□□□ -1.07
BRCA1-201ENST00000352993 ALDH5A1P51649 535 aaPredicted RBP8.34□□□□□ -1.07
BRCA1-201ENST00000352993 MAN2A1Q16706 1144 aa8.34□□□□□ -1.07
BRCA1-201ENST00000352993 INF2Q27J81 1249 aa8.34□□□□□ -1.07
BRCA1-201ENST00000352993 SOGA3Q5TF21 947 aa8.34□□□□□ -1.07
BRCA1-201ENST00000352993 EMC10Q5UCC4 262 aa8.34□□□□□ -1.07
BRCA1-201ENST00000352993 ARMC3Q5W041 872 aa8.34□□□□□ -1.07
BRCA1-201ENST00000352993 MIS18BP1Q6P0N0 1132 aa8.34□□□□□ -1.07
BRCA1-201ENST00000352993 TMED8Q6PL24 325 aaPredicted RBP8.34□□□□□ -1.07
BRCA1-201ENST00000352993 CADPS2Q86UW7 1296 aa8.34□□□□□ -1.07
BRCA1-201ENST00000352993 CABP7Q86V35 215 aa8.34□□□□□ -1.07
BRCA1-201ENST00000352993 ERICH1Q86X53 443 aa8.34□□□□□ -1.07
BRCA1-201ENST00000352993 SPATA5Q8NB90 893 aa8.34□□□□□ -1.07
BRCA1-201ENST00000352993 ZNF570Q96NI8 536 aa8.34□□□□□ -1.07
BRCA1-201ENST00000352993 ZSCAN10Q96SZ4 725 aaPredicted RBP8.34□□□□□ -1.07
BRCA1-201ENST00000352993 LSM14BQ9BX40 385 aaKnown RBP8.34□□□□□ -1.07
BRCA1-201ENST00000352993 FAM129AQ9BZQ8 928 aa8.34□□□□□ -1.07
BRCA1-201ENST00000352993 GREM2Q9H772 168 aa8.34□□□□□ -1.07
BRCA1-201ENST00000352993 KANSL2Q9H9L4 492 aa8.34□□□□□ -1.07
BRCA1-201ENST00000352993 MYO5AQ9Y4I1 1855 aaKnown RBP8.34□□□□□ -1.07
BRCA1-201ENST00000352993 KLHL33A6NCF5 533 aa8.34□□□□□ -1.07
BRCA1-201ENST00000352993 TULP1O00294 542 aaPredicted RBP8.34□□□□□ -1.07
BRCA1-201ENST00000352993 FGFR1OPO95684 399 aaKnown RBP8.34□□□□□ -1.07
BRCA1-201ENST00000352993 SCG2P13521 617 aa8.34□□□□□ -1.07
BRCA1-201ENST00000352993 CYP7A1P22680 504 aa8.34□□□□□ -1.07
BRCA1-201ENST00000352993 SLMAPQ14BN4 828 aa8.34□□□□□ -1.07
BRCA1-201ENST00000352993 LRRC14Q15048 493 aa8.34□□□□□ -1.07
BRCA1-201ENST00000352993 LRRC41Q15345 812 aa8.34□□□□□ -1.07
BRCA1-201ENST00000352993 ENAHQ8N8S7 591 aaPredicted RBP8.34□□□□□ -1.07
BRCA1-201ENST00000352993 CDK5RAP3Q96JB5 506 aa8.34□□□□□ -1.07
BRCA1-201ENST00000352993 EBF2Q9HAK2 575 aa8.34□□□□□ -1.07
BRCA1-201ENST00000352993 VEGFAP15692 232 aaPredicted RBP8.34□□□□□ -1.07
BRCA1-201ENST00000352993 CTCFP49711 727 aaPredicted RBP8.34□□□□□ -1.07
BRCA1-201ENST00000352993 ALX1Q15699 326 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms