RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 SV2BQ7L1I2 683 aa12.32□□□□□ -0.44
ECM1-201ENST00000346569 SAPCD2Q86UD0 394 aa12.32□□□□□ -0.44
ECM1-201ENST00000346569 LUZP1Q86V48 1076 aa12.32□□□□□ -0.44
ECM1-201ENST00000346569 NCAPG2Q86XI2 1143 aa12.32□□□□□ -0.44
ECM1-201ENST00000346569 DHX40Q8IX18 779 aaKnown RBP12.32□□□□□ -0.44
ECM1-201ENST00000346569 ANKRD35Q8N283 1001 aa12.32□□□□□ -0.44
ECM1-201ENST00000346569 FAM43AQ8N2R8 423 aa12.32□□□□□ -0.44
ECM1-201ENST00000346569 FAM133AQ8N9E0 248 aa12.32□□□□□ -0.44
ECM1-201ENST00000346569 SHCBP1Q8NEM2 672 aa12.32□□□□□ -0.44
ECM1-201ENST00000346569 RAD54LQ92698 747 aa12.32□□□□□ -0.44
ECM1-201ENST00000346569 TRIM9Q9C026 710 aa12.32□□□□□ -0.44
ECM1-201ENST00000346569 BLZF1Q9H2G9 400 aa12.32□□□□□ -0.44
ECM1-201ENST00000346569 AGO4Q9HCK5 861 aaKnown RBP12.32□□□□□ -0.44
ECM1-201ENST00000346569 KDM3AQ9Y4C1 1321 aa12.31□□□□□ -0.44
ECM1-201ENST00000346569 DNAJC25-GNG10A0A024R161 153 aa12.31□□□□□ -0.44
ECM1-201ENST00000346569 SOWAHBA6NEL2 793 aa12.31□□□□□ -0.44
ECM1-201ENST00000346569 STAM2O75886 525 aa12.31□□□□□ -0.44
ECM1-201ENST00000346569 SLITRK3O94933 977 aa12.31□□□□□ -0.44
ECM1-201ENST00000346569 RPN1P04843 607 aaKnown RBP12.31□□□□□ -0.44
ECM1-201ENST00000346569 MUTP22033 750 aa12.31□□□□□ -0.44
ECM1-201ENST00000346569 AMPD3Q01432 767 aa12.31□□□□□ -0.44
ECM1-201ENST00000346569 MKRN3Q13064 507 aaKnown RBP12.31□□□□□ -0.44
ECM1-201ENST00000346569 ITGB3BPQ13352 177 aaPredicted RBP12.31□□□□□ -0.44
ECM1-201ENST00000346569 MCM6Q14566 821 aa12.31□□□□□ -0.44
ECM1-201ENST00000346569 KCNB1Q14721 858 aa12.31□□□□□ -0.44
ECM1-201ENST00000346569 EPHA7Q15375 998 aa12.31□□□□□ -0.44
ECM1-201ENST00000346569 NCAPH2Q6IBW4 605 aa12.31□□□□□ -0.44
ECM1-201ENST00000346569 RASAL3Q86YV0 1011 aa12.31□□□□□ -0.44
ECM1-201ENST00000346569 MLKLQ8NB16 471 aa12.31□□□□□ -0.44
ECM1-201ENST00000346569 RASSF8Q8NHQ8 419 aa12.31□□□□□ -0.44
ECM1-201ENST00000346569 ERMNQ8TAM6 284 aa12.31□□□□□ -0.44
ECM1-201ENST00000346569 LARP4BQ92615 738 aaKnown RBP12.31□□□□□ -0.44
ECM1-201ENST00000346569 GPRASP2Q96D09 838 aa12.31□□□□□ -0.44
ECM1-201ENST00000346569 CDK5RAP3Q96JB5 506 aa12.31□□□□□ -0.44
ECM1-201ENST00000346569 EIF2AK1Q9BQI3 630 aaKnown RBP12.31□□□□□ -0.44
ECM1-201ENST00000346569 NAT10Q9H0A0 1025 aaKnown RBP12.31□□□□□ -0.44
ECM1-201ENST00000346569 UNC45AQ9H3U1 944 aa12.31□□□□□ -0.44
ECM1-201ENST00000346569 MROH8Q9H579 483 aa12.31□□□□□ -0.44
ECM1-201ENST00000346569 TBC1D22BQ9NU19 505 aa12.31□□□□□ -0.44
ECM1-201ENST00000346569 MORF4L1Q9UBU8 362 aa12.31□□□□□ -0.44
ECM1-201ENST00000346569 KIAA1024Q9UPX6 916 aa12.31□□□□□ -0.44
ECM1-201ENST00000346569 POTEB3A0JP26 581 aa12.3□□□□□ -0.44
ECM1-201ENST00000346569 MYMKA6NI61 221 aa12.3□□□□□ -0.44
ECM1-201ENST00000346569 POTEB2H3BUK9 544 aa12.3□□□□□ -0.44
ECM1-201ENST00000346569 AP5Z1O43299 807 aa12.3□□□□□ -0.44
ECM1-201ENST00000346569 GAS7O60861 476 aa12.3□□□□□ -0.44
ECM1-201ENST00000346569 ATP9AO75110 1047 aa12.3□□□□□ -0.44
ECM1-201ENST00000346569 EDNRBP24530 442 aa12.3□□□□□ -0.44
ECM1-201ENST00000346569 GCLCP48506 637 aaPredicted RBP12.3□□□□□ -0.44
ECM1-201ENST00000346569 MTMR1Q13613 665 aa12.3□□□□□ -0.44
ECM1-201ENST00000346569 NCAPHQ15003 741 aa12.3□□□□□ -0.44
ECM1-201ENST00000346569 HAUS3Q68CZ6 603 aa12.3□□□□□ -0.44
ECM1-201ENST00000346569 POTEBQ6S5H4 581 aa12.3□□□□□ -0.44
ECM1-201ENST00000346569 GPRC5AQ8NFJ5 357 aa12.3□□□□□ -0.44
ECM1-201ENST00000346569 TEKT3Q9BXF9 490 aa12.3□□□□□ -0.44
ECM1-201ENST00000346569 RGL1Q9NZL6 768 aa12.3□□□□□ -0.44
ECM1-201ENST00000346569 TRPM7Q96QT4 1865 aa12.3□□□□□ -0.44
ECM1-201ENST00000346569 SPATA31C2B4DYI2 1134 aa12.29□□□□□ -0.44
ECM1-201ENST00000346569 PPP1R3GB7ZBB8 358 aa12.29□□□□□ -0.44
ECM1-201ENST00000346569 E9PMD0 336 aa12.29□□□□□ -0.44
ECM1-201ENST00000346569 IKBKBO14920 756 aa12.29□□□□□ -0.44
ECM1-201ENST00000346569 EIF3JO75822 258 aaKnown RBP12.29□□□□□ -0.44
ECM1-201ENST00000346569 RHOBTB3O94955 611 aa12.29□□□□□ -0.44
ECM1-201ENST00000346569 ICAM3P32942 547 aa12.29□□□□□ -0.44
ECM1-201ENST00000346569 ALDH5A1P51649 535 aaPredicted RBP12.29□□□□□ -0.44
ECM1-201ENST00000346569 ZNF157P51786 506 aaPredicted RBP12.29□□□□□ -0.44
ECM1-201ENST00000346569 PSMC6P62333 389 aa12.29□□□□□ -0.44
ECM1-201ENST00000346569 STXBP2Q15833 593 aa12.29□□□□□ -0.44
ECM1-201ENST00000346569 RGMBQ6NW40 437 aa12.29□□□□□ -0.44
ECM1-201ENST00000346569 NLRX1Q86UT6 975 aa12.29□□□□□ -0.44
ECM1-201ENST00000346569 DNAJC19Q96DA6 116 aa12.29□□□□□ -0.44
ECM1-201ENST00000346569 PDLIM2Q96JY6 352 aa12.29□□□□□ -0.44
ECM1-201ENST00000346569 FGD4Q96M96 766 aa12.29□□□□□ -0.44
ECM1-201ENST00000346569 MED15Q96RN5 788 aa12.29□□□□□ -0.44
ECM1-201ENST00000346569 PPP1R9BQ96SB3 815 aa12.29□□□□□ -0.44
ECM1-201ENST00000346569 PORCNQ9H237 461 aa12.29□□□□□ -0.44
ECM1-201ENST00000346569 TUFT1Q9NNX1 390 aa12.29□□□□□ -0.44
ECM1-201ENST00000346569 CREBZFQ9NS37 354 aa12.29□□□□□ -0.44
ECM1-201ENST00000346569 PVALEFA0A1B0GWK0 134 aa12.28□□□□□ -0.44
ECM1-201ENST00000346569 MANSC4A6NHS7 340 aaPredicted RBP12.28□□□□□ -0.44
ECM1-201ENST00000346569 SMTNL1A8MU46 457 aa12.28□□□□□ -0.44
ECM1-201ENST00000346569 PLA2G4BP0C869 781 aa12.28□□□□□ -0.44
ECM1-201ENST00000346569 CD44P16070 742 aaKnown RBP12.28□□□□□ -0.44
ECM1-201ENST00000346569 SLC12A3P55017 1021 aa12.28□□□□□ -0.44
ECM1-201ENST00000346569 INHBEP58166 350 aa12.28□□□□□ -0.44
ECM1-201ENST00000346569 KMT5BQ4FZB7 885 aa12.28□□□□□ -0.44
ECM1-201ENST00000346569 ZNF658Q5TYW1 1059 aaPredicted RBP12.28□□□□□ -0.44
ECM1-201ENST00000346569 AOPEPQ8N6M6 819 aa12.28□□□□□ -0.44
ECM1-201ENST00000346569 SYT2Q8N9I0 419 aaPredicted RBP12.28□□□□□ -0.44
ECM1-201ENST00000346569 DYDC2Q96IM9 177 aa12.28□□□□□ -0.44
ECM1-201ENST00000346569 SENP7Q9BQF6 1050 aa12.28□□□□□ -0.44
ECM1-201ENST00000346569 LRRC27Q9C0I9 530 aa12.28□□□□□ -0.44
ECM1-201ENST00000346569 EFCC1Q9HA90 598 aa12.28□□□□□ -0.44
ECM1-201ENST00000346569 ZCCHC17Q9NP64 241 aaKnown RBP12.28□□□□□ -0.44
ECM1-201ENST00000346569 RMND1Q9NWS8 449 aa12.28□□□□□ -0.44
ECM1-201ENST00000346569 ADD3Q9UEY8 706 aaKnown RBP12.28□□□□□ -0.44
ECM1-201ENST00000346569 DNM3Q9UQ16 869 aa12.28□□□□□ -0.44
ECM1-201ENST00000346569 TLL2Q9Y6L7 1015 aa12.28□□□□□ -0.44
ECM1-201ENST00000346569 RBBP6Q7Z6E9 1792 aaKnown RBP12.28□□□□□ -0.44
ECM1-201ENST00000346569 NFASCO94856 1347 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms