RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 SATB2Q9UPW6 733 aa17.75■□□□□ 0.43
SMAD3-201ENST00000327367 DIAPH2O60879 1101 aa17.75■□□□□ 0.43
SMAD3-201ENST00000327367 NOP14P78316 857 aaKnown RBP17.75■□□□□ 0.43
SMAD3-201ENST00000327367 NBPF9Q3BBW0 867 aa17.75■□□□□ 0.43
SMAD3-201ENST00000327367 POLD4Q9HCU8 107 aa17.75■□□□□ 0.43
SMAD3-201ENST00000327367 GIMAP4Q9NUV9 329 aa17.75■□□□□ 0.43
SMAD3-201ENST00000327367 IKBKBO14920 756 aa17.75■□□□□ 0.43
SMAD3-201ENST00000327367 MCF2LO15068 1137 aa17.75■□□□□ 0.43
SMAD3-201ENST00000327367 PALMO75781 387 aa17.75■□□□□ 0.43
SMAD3-201ENST00000327367 TRPC1P48995 793 aa17.75■□□□□ 0.43
SMAD3-201ENST00000327367 FANCBQ8NB91 859 aa17.75■□□□□ 0.43
SMAD3-201ENST00000327367 PYROXD1Q8WU10 500 aa17.75■□□□□ 0.43
SMAD3-201ENST00000327367 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.75■□□□□ 0.43
SMAD3-201ENST00000327367 FGFR1OP2Q9NVK5 253 aa17.75■□□□□ 0.43
SMAD3-201ENST00000327367 PRKG1Q13976 671 aa17.75■□□□□ 0.43
SMAD3-201ENST00000327367 SPARCL1Q14515 664 aa17.75■□□□□ 0.43
SMAD3-201ENST00000327367 CALN1Q9BXU9 219 aa17.75■□□□□ 0.43
SMAD3-201ENST00000327367 TNNC2P02585 160 aa17.74■□□□□ 0.43
SMAD3-201ENST00000327367 LRRC47Q8N1G4 583 aaKnown RBP17.74■□□□□ 0.43
SMAD3-201ENST00000327367 KCTD6Q8NC69 237 aa17.74■□□□□ 0.43
SMAD3-201ENST00000327367 SNX5Q9Y5X3 404 aa17.74■□□□□ 0.43
SMAD3-201ENST00000327367 N4BP1O75113 896 aaKnown RBP17.74■□□□□ 0.43
SMAD3-201ENST00000327367 GLE1Q53GS7 698 aaKnown RBP17.74■□□□□ 0.43
SMAD3-201ENST00000327367 TMEM154Q6P9G4 183 aa17.74■□□□□ 0.43
SMAD3-201ENST00000327367 TGS1Q96RS0 853 aaKnown RBP17.74■□□□□ 0.43
SMAD3-201ENST00000327367 NDE1Q9NXR1 346 aa17.74■□□□□ 0.43
SMAD3-201ENST00000327367 STX18Q9P2W9 335 aaKnown RBP17.74■□□□□ 0.43
SMAD3-201ENST00000327367 MORC2Q9Y6X9 1032 aaPredicted RBP17.74■□□□□ 0.43
SMAD3-201ENST00000327367 HSPD1P10809 573 aaKnown RBP17.74■□□□□ 0.43
SMAD3-201ENST00000327367 MFAP3P55082 362 aa17.74■□□□□ 0.43
SMAD3-201ENST00000327367 NEK8Q86SG6 692 aa17.74■□□□□ 0.43
SMAD3-201ENST00000327367 DYTNA2CJ06 578 aa17.74■□□□□ 0.43
SMAD3-201ENST00000327367 EIF3BP55884 814 aaKnown RBP17.74■□□□□ 0.43
SMAD3-201ENST00000327367 FLCNQ8NFG4 579 aa17.74■□□□□ 0.43
SMAD3-201ENST00000327367 CARMIL3Q8ND23 1372 aa17.74■□□□□ 0.43
SMAD3-201ENST00000327367 F5H423 210 aaPredicted RBP17.74■□□□□ 0.43
SMAD3-201ENST00000327367 DAB1O75553 588 aa17.74■□□□□ 0.43
SMAD3-201ENST00000327367 TPTE2Q6XPS3 522 aa17.74■□□□□ 0.43
SMAD3-201ENST00000327367 RNF207Q6ZRF8 634 aa17.74■□□□□ 0.43
SMAD3-201ENST00000327367 ARL8AQ96BM9 186 aa17.74■□□□□ 0.43
SMAD3-201ENST00000327367 PSTPIP2Q9H939 334 aa17.74■□□□□ 0.43
SMAD3-201ENST00000327367 MLXIPQ9HAP2 919 aa17.74■□□□□ 0.43
SMAD3-201ENST00000327367 UBE2TQ9NPD8 197 aaPredicted RBP17.74■□□□□ 0.43
SMAD3-201ENST00000327367 IPO11Q9UI26 975 aaKnown RBP17.74■□□□□ 0.43
SMAD3-201ENST00000327367 NOD1Q9Y239 953 aa17.74■□□□□ 0.43
SMAD3-201ENST00000327367 PTK2Q05397 1052 aa17.73■□□□□ 0.43
SMAD3-201ENST00000327367 LONP2Q86WA8 852 aa17.73■□□□□ 0.43
SMAD3-201ENST00000327367 TRIM15Q9C019 465 aa17.73■□□□□ 0.43
SMAD3-201ENST00000327367 KIF9Q9HAQ2 790 aa17.73■□□□□ 0.43
SMAD3-201ENST00000327367 PAIP2BQ9ULR5 123 aaKnown RBP17.73■□□□□ 0.43
SMAD3-201ENST00000327367 PLCH2O75038 1416 aa17.73■□□□□ 0.43
SMAD3-201ENST00000327367 HAUS5O94927 633 aa17.73■□□□□ 0.43
SMAD3-201ENST00000327367 TRIM37O94972 964 aa17.73■□□□□ 0.43
SMAD3-201ENST00000327367 CEBPAP49715 358 aaPredicted RBP17.73■□□□□ 0.43
SMAD3-201ENST00000327367 PPP2R2AP63151 447 aa17.73■□□□□ 0.43
SMAD3-201ENST00000327367 IRX1P78414 480 aaPredicted RBP17.73■□□□□ 0.43
SMAD3-201ENST00000327367 ALKBH8Q96BT7 664 aaKnown RBP17.73■□□□□ 0.43
SMAD3-201ENST00000327367 ARHGAP26Q9UNA1 814 aa17.73■□□□□ 0.43
SMAD3-201ENST00000327367 KRT27Q7Z3Y8 459 aa17.73■□□□□ 0.43
SMAD3-201ENST00000327367 LRRC37BQ96QE4 947 aa17.73■□□□□ 0.43
SMAD3-201ENST00000327367 GCNT4Q9P109 453 aa17.73■□□□□ 0.43
SMAD3-201ENST00000327367 RNF103-CHMP3A0A140T963 221 aa17.73■□□□□ 0.43
SMAD3-201ENST00000327367 ADA2Q9NZK5 511 aa17.73■□□□□ 0.43
SMAD3-201ENST00000327367 CFAP69A5D8W1 941 aa17.73■□□□□ 0.43
SMAD3-201ENST00000327367 LARGE1O95461 756 aa17.73■□□□□ 0.43
SMAD3-201ENST00000327367 PABPC4Q13310 644 aaKnown RBP eCLIP17.73■□□□□ 0.43
SMAD3-201ENST00000327367 ZNF658Q5TYW1 1059 aaPredicted RBP17.73■□□□□ 0.43
SMAD3-201ENST00000327367 OLFM3Q96PB7 478 aa17.73■□□□□ 0.43
SMAD3-201ENST00000327367 LSG1Q9H089 658 aaKnown RBP17.73■□□□□ 0.43
SMAD3-201ENST00000327367 SCG2P13521 617 aa17.72■□□□□ 0.43
SMAD3-201ENST00000327367 CARSP49589 748 aaKnown RBP17.72■□□□□ 0.43
SMAD3-201ENST00000327367 THOC5Q13769 683 aaKnown RBP17.72■□□□□ 0.43
SMAD3-201ENST00000327367 EMBQ6PCB8 327 aa17.72■□□□□ 0.43
SMAD3-201ENST00000327367 SLC30A9Q6PML9 568 aa17.72■□□□□ 0.43
SMAD3-201ENST00000327367 ZWILCHQ9H900 591 aa17.72■□□□□ 0.43
SMAD3-201ENST00000327367 ELF1P32519 619 aa17.72■□□□□ 0.43
SMAD3-201ENST00000327367 KRT75O95678 551 aa17.72■□□□□ 0.43
SMAD3-201ENST00000327367 CUL1Q13616 776 aa17.72■□□□□ 0.43
SMAD3-201ENST00000327367 SLC39A14Q15043 492 aa17.72■□□□□ 0.43
SMAD3-201ENST00000327367 PDZD4Q76G19 769 aaPredicted RBP17.72■□□□□ 0.43
SMAD3-201ENST00000327367 UNC5CLQ8IV45 518 aa17.72■□□□□ 0.43
SMAD3-201ENST00000327367 PPP1R36Q96LQ0 422 aa17.72■□□□□ 0.43
SMAD3-201ENST00000327367 GSDMAQ96QA5 445 aa17.72■□□□□ 0.43
SMAD3-201ENST00000327367 CSRNP1Q96S65 589 aa17.72■□□□□ 0.43
SMAD3-201ENST00000327367 LZTS2Q9BRK4 669 aa17.72■□□□□ 0.43
SMAD3-201ENST00000327367 ANTXR1Q9H6X2 564 aa17.72■□□□□ 0.43
SMAD3-201ENST00000327367 IQANK1A0A1B0GTG1 560 aa17.72■□□□□ 0.43
SMAD3-201ENST00000327367 USP17L12C9JPN9 530 aa17.72■□□□□ 0.43
SMAD3-201ENST00000327367 USP17L21D6R901 530 aa17.72■□□□□ 0.43
SMAD3-201ENST00000327367 VCAM1P19320 739 aa17.72■□□□□ 0.43
SMAD3-201ENST00000327367 EYA3Q99504 573 aa17.72■□□□□ 0.43
SMAD3-201ENST00000327367 APOBEC2Q9Y235 224 aaKnown RBP17.72■□□□□ 0.43
SMAD3-201ENST00000327367 NCKAP5LQ9HCH0 1330 aa17.72■□□□□ 0.43
SMAD3-201ENST00000327367 A0A1W2PQ27 194 aa17.71■□□□□ 0.43
SMAD3-201ENST00000327367 A0A1W2PQ64 194 aa17.71■□□□□ 0.43
SMAD3-201ENST00000327367 A0A1W2PQD8 194 aa17.71■□□□□ 0.43
SMAD3-201ENST00000327367 MEIS1O00470 390 aa17.71■□□□□ 0.43
SMAD3-201ENST00000327367 CCDC15Q0P6D6 951 aa17.71■□□□□ 0.43
SMAD3-201ENST00000327367 ZC3H12BQ5HYM0 836 aaKnown RBP17.71■□□□□ 0.43
SMAD3-201ENST00000327367 PLBD2Q8NHP8 589 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms