RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 TCHHQ07283 1943 aa12.08□□□□□ -0.48
TOP3A-201ENST00000321105 SLC7A5Q01650 507 aa12.08□□□□□ -0.48
TOP3A-201ENST00000321105 STRN3Q13033 797 aa12.08□□□□□ -0.48
TOP3A-201ENST00000321105 SLC15A2Q16348 729 aa12.08□□□□□ -0.48
TOP3A-201ENST00000321105 NBPF9Q3BBW0 867 aa12.08□□□□□ -0.48
TOP3A-201ENST00000321105 HAUS4Q9H6D7 363 aa12.08□□□□□ -0.48
TOP3A-201ENST00000321105 PRR12Q9ULL5 1215 aa12.08□□□□□ -0.48
TOP3A-201ENST00000321105 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.08□□□□□ -0.48
TOP3A-201ENST00000321105 HYOU1Q9Y4L1 999 aa12.08□□□□□ -0.48
TOP3A-201ENST00000321105 PALM3A6NDB9 673 aaPredicted RBP12.08□□□□□ -0.48
TOP3A-201ENST00000321105 NMT1P30419 496 aaKnown RBP12.08□□□□□ -0.48
TOP3A-201ENST00000321105 DCAF15Q66K64 600 aa12.08□□□□□ -0.48
TOP3A-201ENST00000321105 GBP6Q6ZN66 633 aa12.08□□□□□ -0.48
TOP3A-201ENST00000321105 USP37Q86T82 979 aa12.08□□□□□ -0.48
TOP3A-201ENST00000321105 AGBL1Q96MI9 1066 aa12.08□□□□□ -0.48
TOP3A-201ENST00000321105 AZI2Q9H6S1 392 aa12.08□□□□□ -0.48
TOP3A-201ENST00000321105 OGFRQ9NZT2 677 aa12.08□□□□□ -0.48
TOP3A-201ENST00000321105 FMN2Q9NZ56 1722 aa12.08□□□□□ -0.48
TOP3A-201ENST00000321105 HSF2BPO75031 334 aa12.07□□□□□ -0.48
TOP3A-201ENST00000321105 TUBB4AP04350 444 aa12.07□□□□□ -0.48
TOP3A-201ENST00000321105 TRIM49P0CI25 452 aa12.07□□□□□ -0.48
TOP3A-201ENST00000321105 TRIM49CP0CI26 452 aa12.07□□□□□ -0.48
TOP3A-201ENST00000321105 CETN2P41208 172 aa12.07□□□□□ -0.48
TOP3A-201ENST00000321105 RPS6KA1Q15418 735 aa12.07□□□□□ -0.48
TOP3A-201ENST00000321105 UNC13DQ70J99 1090 aa12.07□□□□□ -0.48
TOP3A-201ENST00000321105 LDHDQ86WU2 507 aa12.07□□□□□ -0.48
TOP3A-201ENST00000321105 CCDC51Q96ER9 411 aa12.07□□□□□ -0.48
TOP3A-201ENST00000321105 CUEDC2Q9H467 287 aa12.07□□□□□ -0.48
TOP3A-201ENST00000321105 PACSIN2Q9UNF0 486 aaPredicted RBP12.07□□□□□ -0.48
TOP3A-201ENST00000321105 HPSEQ9Y251 543 aa12.07□□□□□ -0.48
TOP3A-201ENST00000321105 HGSO14964 777 aaPredicted RBP12.07□□□□□ -0.48
TOP3A-201ENST00000321105 MTMR2Q13614 643 aa12.07□□□□□ -0.48
TOP3A-201ENST00000321105 TMED8Q6PL24 325 aaPredicted RBP12.07□□□□□ -0.48
TOP3A-201ENST00000321105 ZNF384Q8TF68 577 aa12.07□□□□□ -0.48
TOP3A-201ENST00000321105 RAD54LQ92698 747 aa12.07□□□□□ -0.48
TOP3A-201ENST00000321105 ZMYND12Q9H0C1 365 aa12.07□□□□□ -0.48
TOP3A-201ENST00000321105 GCNT4Q9P109 453 aa12.07□□□□□ -0.48
TOP3A-201ENST00000321105 DDX41Q9UJV9 622 aaKnown RBP12.07□□□□□ -0.48
TOP3A-201ENST00000321105 IVNS1ABPQ9Y6Y0 642 aa12.07□□□□□ -0.48
TOP3A-201ENST00000321105 LRRC53A6NM62 1247 aa12.07□□□□□ -0.48
TOP3A-201ENST00000321105 GFPT1Q06210 699 aaPredicted RBP12.07□□□□□ -0.48
TOP3A-201ENST00000321105 SEPT7Q16181 437 aaKnown RBP12.07□□□□□ -0.48
TOP3A-201ENST00000321105 VWA3BQ502W6 1294 aa12.07□□□□□ -0.48
TOP3A-201ENST00000321105 GSTA5Q7RTV2 222 aa12.07□□□□□ -0.48
TOP3A-201ENST00000321105 UBLCP1Q8WVY7 318 aaPredicted RBP12.07□□□□□ -0.48
TOP3A-201ENST00000321105 ATRIPQ8WXE1 791 aa12.07□□□□□ -0.48
TOP3A-201ENST00000321105 NUDT12Q9BQG2 462 aa12.07□□□□□ -0.48
TOP3A-201ENST00000321105 PARVGQ9HBI0 331 aa12.07□□□□□ -0.48
TOP3A-201ENST00000321105 CDC23Q9UJX2 597 aa12.07□□□□□ -0.48
TOP3A-201ENST00000321105 TRPC6Q9Y210 931 aa12.07□□□□□ -0.48
TOP3A-201ENST00000321105 SRCAPQ6ZRS2 3230 aa12.07□□□□□ -0.48
TOP3A-201ENST00000321105 NALCNQ8IZF0 1738 aa12.06□□□□□ -0.48
TOP3A-201ENST00000321105 GOLGA6L10A0A0M3HER8 536 aa12.06□□□□□ -0.48
TOP3A-201ENST00000321105 LGALS16A8MUM7 142 aa12.06□□□□□ -0.48
TOP3A-201ENST00000321105 IPO5O00410 1097 aaKnown RBP12.06□□□□□ -0.48
TOP3A-201ENST00000321105 MCM3P25205 808 aa12.06□□□□□ -0.48
TOP3A-201ENST00000321105 POLGP54098 1239 aaPredicted RBP12.06□□□□□ -0.48
TOP3A-201ENST00000321105 NCAPHQ15003 741 aa12.06□□□□□ -0.48
TOP3A-201ENST00000321105 WDR44Q5JSH3 913 aa12.06□□□□□ -0.48
TOP3A-201ENST00000321105 RAD9BQ6WBX8 426 aa12.06□□□□□ -0.48
TOP3A-201ENST00000321105 MICALL2Q8IY33 904 aa12.06□□□□□ -0.48
TOP3A-201ENST00000321105 DEPTORQ8TB45 409 aa12.06□□□□□ -0.48
TOP3A-201ENST00000321105 CCDC114Q96M63 670 aa12.06□□□□□ -0.48
TOP3A-201ENST00000321105 OAS2P29728 719 aaKnown RBP12.06□□□□□ -0.48
TOP3A-201ENST00000321105 KIF11P52732 1056 aa12.06□□□□□ -0.48
TOP3A-201ENST00000321105 RNF187Q5TA31 235 aaPredicted RBP12.06□□□□□ -0.48
TOP3A-201ENST00000321105 SNRNP48Q6IEG0 339 aaKnown RBP12.06□□□□□ -0.48
TOP3A-201ENST00000321105 DCPSQ96C86 337 aaKnown RBP12.06□□□□□ -0.48
TOP3A-201ENST00000321105 ZNF70Q9UC06 446 aaPredicted RBP12.06□□□□□ -0.48
TOP3A-201ENST00000321105 ADGRG1Q9Y653 693 aa12.06□□□□□ -0.48
TOP3A-201ENST00000321105 PLEKHG2Q9H7P9 1386 aa12.06□□□□□ -0.48
TOP3A-201ENST00000321105 TFRCP02786 760 aaKnown RBP12.06□□□□□ -0.48
TOP3A-201ENST00000321105 BMP6P22004 513 aa12.06□□□□□ -0.48
TOP3A-201ENST00000321105 C2orf54Q08AI8 447 aa12.06□□□□□ -0.48
TOP3A-201ENST00000321105 Q3C1V9 767 aa12.06□□□□□ -0.48
TOP3A-201ENST00000321105 TTC19Q6DKK2 380 aaPredicted RBP12.06□□□□□ -0.48
TOP3A-201ENST00000321105 RNF207Q6ZRF8 634 aa12.06□□□□□ -0.48
TOP3A-201ENST00000321105 DNAAF5Q86Y56 855 aa12.06□□□□□ -0.48
TOP3A-201ENST00000321105 TC2NQ8N9U0 490 aa12.06□□□□□ -0.48
TOP3A-201ENST00000321105 DPH5Q9H2P9 285 aa12.06□□□□□ -0.48
TOP3A-201ENST00000321105 ZCCHC17Q9NP64 241 aaKnown RBP12.06□□□□□ -0.48
TOP3A-201ENST00000321105 AKAP12Q02952 1782 aa12.06□□□□□ -0.48
TOP3A-201ENST00000321105 LIG4P49917 911 aa12.06□□□□□ -0.48
TOP3A-201ENST00000321105 ZBED6P86452 979 aa12.06□□□□□ -0.48
TOP3A-201ENST00000321105 ZC2HC1CQ53FD0 456 aaPredicted RBP12.06□□□□□ -0.48
TOP3A-201ENST00000321105 CYFIP1Q7L576 1253 aa12.06□□□□□ -0.48
TOP3A-201ENST00000321105 PARD6BQ9BYG5 372 aa12.06□□□□□ -0.48
TOP3A-201ENST00000321105 ST7Q9NRC1 585 aa12.06□□□□□ -0.48
TOP3A-201ENST00000321105 ADD3Q9UEY8 706 aaKnown RBP12.06□□□□□ -0.48
TOP3A-201ENST00000321105 CNOT7Q9UIV1 285 aaKnown RBP12.06□□□□□ -0.48
TOP3A-201ENST00000321105 NCK2O43639 380 aa12.05□□□□□ -0.48
TOP3A-201ENST00000321105 GCLMP48507 274 aa12.05□□□□□ -0.48
TOP3A-201ENST00000321105 CLCN6P51797 869 aa12.05□□□□□ -0.48
TOP3A-201ENST00000321105 PMS1P54277 932 aaKnown RBP12.05□□□□□ -0.48
TOP3A-201ENST00000321105 MTMR1Q13613 665 aa12.05□□□□□ -0.48
TOP3A-201ENST00000321105 HDXQ7Z353 690 aa12.05□□□□□ -0.48
TOP3A-201ENST00000321105 GSPT2Q8IYD1 628 aaKnown RBP12.05□□□□□ -0.48
TOP3A-201ENST00000321105 ZKSCAN4Q969J2 545 aaPredicted RBP12.05□□□□□ -0.48
TOP3A-201ENST00000321105 AKT1S1Q96B36 256 aa12.05□□□□□ -0.48
TOP3A-201ENST00000321105 NACC1Q96RE7 527 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms