RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 DCAF17Q5H9S7 520 aaPredicted RBP10.58□□□□□ -0.72
RPGR-201ENST00000318842 PDXDC1Q6P996 788 aa10.58□□□□□ -0.72
RPGR-201ENST00000318842 OTUD6AQ7L8S5 288 aa10.58□□□□□ -0.72
RPGR-201ENST00000318842 CCDC170Q8IYT3 715 aa10.58□□□□□ -0.72
RPGR-201ENST00000318842 RETREG2Q8NC44 543 aa10.58□□□□□ -0.72
RPGR-201ENST00000318842 SNX29Q8TEQ0 813 aa10.58□□□□□ -0.72
RPGR-201ENST00000318842 GLG1Q92896 1179 aa10.58□□□□□ -0.72
RPGR-201ENST00000318842 ADAM33Q9BZ11 813 aa10.58□□□□□ -0.72
RPGR-201ENST00000318842 OSGEPQ9NPF4 335 aa10.58□□□□□ -0.72
RPGR-201ENST00000318842 KLC4Q9NSK0 619 aa10.58□□□□□ -0.72
RPGR-201ENST00000318842 PNMA2Q9UL42 364 aa10.58□□□□□ -0.72
RPGR-201ENST00000318842 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.58□□□□□ -0.722e-6■■■■■ 55.4
RPGR-201ENST00000318842 THRAP3Q9Y2W1 955 aaKnown RBP10.58□□□□□ -0.72
RPGR-201ENST00000318842 RTCBQ9Y3I0 505 aaKnown RBP10.58□□□□□ -0.72
RPGR-201ENST00000318842 ANO9A1A5B4 782 aa10.58□□□□□ -0.72
RPGR-201ENST00000318842 PTK2Q05397 1052 aa10.58□□□□□ -0.72
RPGR-201ENST00000318842 ZNF844Q08AG5 666 aa10.58□□□□□ -0.72
RPGR-201ENST00000318842 CFAP221Q4G0U5 840 aa10.58□□□□□ -0.72
RPGR-201ENST00000318842 TCERG1LQ5VWI1 586 aa10.58□□□□□ -0.72
RPGR-201ENST00000318842 INTS5Q6P9B9 1019 aaKnown RBP10.58□□□□□ -0.72
RPGR-201ENST00000318842 CDK5RAP3Q96JB5 506 aa10.58□□□□□ -0.72
RPGR-201ENST00000318842 ATP6V1G3Q96LB4 118 aa10.58□□□□□ -0.72
RPGR-201ENST00000318842 ARPP21Q9UBL0 812 aaPredicted RBP10.58□□□□□ -0.72
RPGR-201ENST00000318842 LEMD3Q9Y2U8 911 aa10.58□□□□□ -0.72
RPGR-201ENST00000318842 PHRF1Q9P1Y6 1649 aaKnown RBP10.58□□□□□ -0.72
RPGR-201ENST00000318842 DUOX1Q9NRD9 1551 aa10.58□□□□□ -0.72
RPGR-201ENST00000318842 A8MUI8 341 aa10.58□□□□□ -0.72
RPGR-201ENST00000318842 F8W031 263 aaPredicted RBP10.58□□□□□ -0.72
RPGR-201ENST00000318842 M0R2N6 131 aa10.58□□□□□ -0.72
RPGR-201ENST00000318842 EDIL3O43854 480 aa10.58□□□□□ -0.72
RPGR-201ENST00000318842 POLD1P28340 1107 aa10.58□□□□□ -0.72
RPGR-201ENST00000318842 BYSLQ13895 437 aaKnown RBP10.58□□□□□ -0.72
RPGR-201ENST00000318842 LRRC55Q6ZSA7 311 aa10.58□□□□□ -0.72
RPGR-201ENST00000318842 DZIP1Q86YF9 867 aaKnown RBP10.58□□□□□ -0.72
RPGR-201ENST00000318842 SUGP1Q8IWZ8 645 aaKnown RBP10.58□□□□□ -0.72
RPGR-201ENST00000318842 FNBP4Q8N3X1 1017 aaPredicted RBP10.58□□□□□ -0.72
RPGR-201ENST00000318842 TCP11Q8WWU5 503 aa10.58□□□□□ -0.72
RPGR-201ENST00000318842 PRCCQ92733 491 aaPredicted RBP10.58□□□□□ -0.72
RPGR-201ENST00000318842 SELENOSQ9BQE4 189 aa10.58□□□□□ -0.72
RPGR-201ENST00000318842 DDAH1O94760 285 aa10.57□□□□□ -0.72
RPGR-201ENST00000318842 NTSR2O95665 410 aa10.57□□□□□ -0.72
RPGR-201ENST00000318842 KLHL30Q0D2K2 578 aa10.57□□□□□ -0.72
RPGR-201ENST00000318842 TTBK2Q6IQ55 1244 aa10.57□□□□□ -0.72
RPGR-201ENST00000318842 CCDC91Q7Z6B0 441 aa10.57□□□□□ -0.72
RPGR-201ENST00000318842 IFT20Q8IY31 132 aa10.57□□□□□ -0.72
RPGR-201ENST00000318842 ERGIC2Q96RQ1 377 aa10.57□□□□□ -0.72
RPGR-201ENST00000318842 TACO1Q9BSH4 297 aaKnown RBP10.57□□□□□ -0.72
RPGR-201ENST00000318842 KCNQ5Q9NR82 932 aa10.57□□□□□ -0.72
RPGR-201ENST00000318842 BAIAP2L1Q9UHR4 511 aa10.57□□□□□ -0.72
RPGR-201ENST00000318842 NID2Q14112 1375 aa10.57□□□□□ -0.72
RPGR-201ENST00000318842 COL18A1P39060 1754 aa10.57□□□□□ -0.72
RPGR-201ENST00000318842 FAM196BA6NMK8 535 aa10.57□□□□□ -0.72
RPGR-201ENST00000318842 TMEM110-MUSTN1A8MSY1 372 aa10.57□□□□□ -0.72
RPGR-201ENST00000318842 CLIC2O15247 247 aa10.57□□□□□ -0.72
RPGR-201ENST00000318842 BMP15O95972 392 aa10.57□□□□□ -0.72
RPGR-201ENST00000318842 MCM3P25205 808 aa10.57□□□□□ -0.72
RPGR-201ENST00000318842 PICALMQ13492 652 aa10.57□□□□□ -0.72
RPGR-201ENST00000318842 KRT71Q3SY84 523 aa10.57□□□□□ -0.72
RPGR-201ENST00000318842 CAVIN4Q5BKX8 364 aa10.57□□□□□ -0.72
RPGR-201ENST00000318842 SEPT14Q6ZU15 432 aa10.57□□□□□ -0.72
RPGR-201ENST00000318842 KIF2BQ8N4N8 673 aa10.57□□□□□ -0.72
RPGR-201ENST00000318842 RAPGEF5Q92565 580 aa10.57□□□□□ -0.72
RPGR-201ENST00000318842 DHTKD1Q96HY7 919 aaPredicted RBP10.57□□□□□ -0.72
RPGR-201ENST00000318842 SEPT11Q9NVA2 429 aaKnown RBP10.57□□□□□ -0.72
RPGR-201ENST00000318842 TPX2Q9ULW0 747 aaKnown RBP10.57□□□□□ -0.72
RPGR-201ENST00000318842 TRIM33Q9UPN9 1127 aa10.57□□□□□ -0.72
RPGR-201ENST00000318842 POTEB3A0JP26 581 aa10.56□□□□□ -0.72
RPGR-201ENST00000318842 POTECB2RU33 542 aa10.56□□□□□ -0.72
RPGR-201ENST00000318842 TCP1P17987 556 aaKnown RBP10.56□□□□□ -0.72
RPGR-201ENST00000318842 TNIP1Q15025 636 aa10.56□□□□□ -0.72
RPGR-201ENST00000318842 ASTE1Q2TB18 679 aaPredicted RBP10.56□□□□□ -0.72
RPGR-201ENST00000318842 SFMBT2Q5VUG0 894 aa10.56□□□□□ -0.72
RPGR-201ENST00000318842 EMBQ6PCB8 327 aa10.56□□□□□ -0.72
RPGR-201ENST00000318842 POTEBQ6S5H4 581 aa10.56□□□□□ -0.72
RPGR-201ENST00000318842 ZNF571Q7Z3V5 609 aaPredicted RBP10.56□□□□□ -0.72
RPGR-201ENST00000318842 PNMA8AQ86V59 439 aaPredicted RBP10.56□□□□□ -0.72
RPGR-201ENST00000318842 TICAM2Q86XR7 235 aa10.56□□□□□ -0.72
RPGR-201ENST00000318842 MSL3Q8N5Y2 521 aaKnown RBP10.56□□□□□ -0.72
RPGR-201ENST00000318842 INPP4AQ96PE3 977 aaPredicted RBP10.56□□□□□ -0.72
RPGR-201ENST00000318842 ANAPC4Q9UJX5 808 aa10.56□□□□□ -0.72
RPGR-201ENST00000318842 SART1O43290 800 aaKnown RBP10.56□□□□□ -0.72
RPGR-201ENST00000318842 MARCH6O60337 910 aa10.56□□□□□ -0.72
RPGR-201ENST00000318842 CREB1P16220 341 aa10.56□□□□□ -0.72
RPGR-201ENST00000318842 IFI35P80217 286 aaPredicted RBP10.56□□□□□ -0.72
RPGR-201ENST00000318842 PAK2Q13177 524 aa10.56□□□□□ -0.72
RPGR-201ENST00000318842 KCNB1Q14721 858 aa10.56□□□□□ -0.72
RPGR-201ENST00000318842 NKX1-1Q15270 411 aaPredicted RBP10.56□□□□□ -0.72
RPGR-201ENST00000318842 IQCEQ6IPM2 695 aa10.56□□□□□ -0.72
RPGR-201ENST00000318842 SV2BQ7L1I2 683 aa10.56□□□□□ -0.72
RPGR-201ENST00000318842 AMIGO3Q86WK7 504 aa10.56□□□□□ -0.72
RPGR-201ENST00000318842 LARP4BQ92615 738 aaKnown RBP10.56□□□□□ -0.72
RPGR-201ENST00000318842 GDF3Q9NR23 364 aa10.56□□□□□ -0.72
RPGR-201ENST00000318842 TMOD4Q9NZQ9 345 aa10.56□□□□□ -0.72
RPGR-201ENST00000318842 COL5A2P05997 1499 aaPredicted RBP10.56□□□□□ -0.72
RPGR-201ENST00000318842 CAND2O75155 1236 aa10.56□□□□□ -0.72
RPGR-201ENST00000318842 CAMTA2O94983 1202 aa10.56□□□□□ -0.72
RPGR-201ENST00000318842 ADAMTS2O95450 1211 aa10.56□□□□□ -0.72
RPGR-201ENST00000318842 CLTAP09496 248 aa10.56□□□□□ -0.72
RPGR-201ENST00000318842 YY1P25490 414 aa10.56□□□□□ -0.72
RPGR-201ENST00000318842 CASP4P49662 377 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms