RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 ENC1O14682 589 aa8.46□□□□□ -1.06
TRIM55-202ENST00000315962 MSH4O15457 936 aa8.46□□□□□ -1.06
TRIM55-202ENST00000315962 ERCC5P28715 1186 aaPredicted RBP8.46□□□□□ -1.06
TRIM55-202ENST00000315962 CASP14P31944 242 aa8.46□□□□□ -1.06
TRIM55-202ENST00000315962 KCNJ12Q14500 433 aa8.46□□□□□ -1.06
TRIM55-202ENST00000315962 PLS1Q14651 629 aa8.46□□□□□ -1.06
TRIM55-202ENST00000315962 ZSCAN26Q16670 478 aa8.46□□□□□ -1.06
TRIM55-202ENST00000315962 KCTD19Q17RG1 926 aaPredicted RBP8.46□□□□□ -1.06
TRIM55-202ENST00000315962 MOB2Q70IA6 237 aa8.46□□□□□ -1.06
TRIM55-202ENST00000315962 CATSPER3Q86XQ3 398 aa8.46□□□□□ -1.06
TRIM55-202ENST00000315962 IRF2BP1Q8IU81 584 aa8.46□□□□□ -1.06
TRIM55-202ENST00000315962 TPH2Q8IWU9 490 aa8.46□□□□□ -1.06
TRIM55-202ENST00000315962 GSPT2Q8IYD1 628 aaKnown RBP8.46□□□□□ -1.06
TRIM55-202ENST00000315962 CSGALNACT2Q8N6G5 542 aa8.46□□□□□ -1.06
TRIM55-202ENST00000315962 CCDC155Q8N6L0 562 aa8.46□□□□□ -1.06
TRIM55-202ENST00000315962 UPF1Q92900 1129 aaKnown RBP eCLIP8.46□□□□□ -1.06
TRIM55-202ENST00000315962 HOOK2Q96ED9 719 aa8.46□□□□□ -1.06
TRIM55-202ENST00000315962 SGIP1Q9BQI5 828 aa8.46□□□□□ -1.06
TRIM55-202ENST00000315962 FUT8Q9BYC5 575 aa8.46□□□□□ -1.06
TRIM55-202ENST00000315962 RIPK3Q9Y572 518 aa8.46□□□□□ -1.06
TRIM55-202ENST00000315962 B4DLN1 442 aa8.46□□□□□ -1.06
TRIM55-202ENST00000315962 KRT18P05783 430 aaKnown RBP8.46□□□□□ -1.06
TRIM55-202ENST00000315962 NT5C2P49902 561 aa8.46□□□□□ -1.06
TRIM55-202ENST00000315962 MAP3K9P80192 1104 aa8.46□□□□□ -1.06
TRIM55-202ENST00000315962 UBXN1Q04323 297 aa8.46□□□□□ -1.06
TRIM55-202ENST00000315962 NR1I3Q14994 352 aa8.46□□□□□ -1.06
TRIM55-202ENST00000315962 MUM1L1Q5H9M0 696 aa8.46□□□□□ -1.06
TRIM55-202ENST00000315962 TAF3Q5VWG9 929 aa8.46□□□□□ -1.06
TRIM55-202ENST00000315962 PPP4R3AQ6IN85 833 aa8.46□□□□□ -1.06
TRIM55-202ENST00000315962 NSMFQ6X4W1 530 aa8.46□□□□□ -1.06
TRIM55-202ENST00000315962 APTXQ7Z2E3 356 aaKnown RBP8.46□□□□□ -1.06
TRIM55-202ENST00000315962 ADSSL1Q8N142 457 aa8.46□□□□□ -1.06
TRIM55-202ENST00000315962 IL31RAQ8NI17 732 aa8.46□□□□□ -1.06
TRIM55-202ENST00000315962 COL20A1Q9P218 1284 aa8.46□□□□□ -1.06
TRIM55-202ENST00000315962 PGAP2Q9UHJ9 254 aa8.46□□□□□ -1.06
TRIM55-202ENST00000315962 ADAM21Q9UKJ8 722 aa8.46□□□□□ -1.06
TRIM55-202ENST00000315962 DLEC1Q9Y238 1755 aa8.45□□□□□ -1.06
TRIM55-202ENST00000315962 TMEM150BA6NC51 233 aa8.45□□□□□ -1.06
TRIM55-202ENST00000315962 H7C1D1 291 aa8.45□□□□□ -1.06
TRIM55-202ENST00000315962 NPM3O75607 178 aaKnown RBP8.45□□□□□ -1.06
TRIM55-202ENST00000315962 ARP10275 920 aa8.45□□□□□ -1.06
TRIM55-202ENST00000315962 EIF2AK2P19525 551 aaKnown RBP8.45□□□□□ -1.06
TRIM55-202ENST00000315962 FXR1P51114 621 aaKnown RBP eCLIP8.45□□□□□ -1.06
TRIM55-202ENST00000315962 CHMP4BP1P59074 171 aa8.45□□□□□ -1.06
TRIM55-202ENST00000315962 KSR1Q8IVT5 923 aa8.45□□□□□ -1.06
TRIM55-202ENST00000315962 SLC35F6Q8N357 371 aa8.45□□□□□ -1.06
TRIM55-202ENST00000315962 CCDC102AQ96A19 550 aa8.45□□□□□ -1.06
TRIM55-202ENST00000315962 LENG9Q96B70 501 aa8.45□□□□□ -1.06
TRIM55-202ENST00000315962 AK8Q96MA6 479 aa8.45□□□□□ -1.06
TRIM55-202ENST00000315962 WDR18Q9BV38 432 aa8.45□□□□□ -1.06
TRIM55-202ENST00000315962 FEZ2Q9UHY8 353 aaPredicted RBP8.45□□□□□ -1.06
TRIM55-202ENST00000315962 FAN1Q9Y2M0 1017 aa8.45□□□□□ -1.06
TRIM55-202ENST00000315962 RSPH10B2B2RC85 870 aa8.45□□□□□ -1.06
TRIM55-202ENST00000315962 RSPH10BP0C881 870 aa8.45□□□□□ -1.06
TRIM55-202ENST00000315962 CHRM1P11229 460 aaPredicted RBP8.45□□□□□ -1.06
TRIM55-202ENST00000315962 MYCLP12524 364 aaPredicted RBP8.45□□□□□ -1.06
TRIM55-202ENST00000315962 VCAM1P19320 739 aa8.45□□□□□ -1.06
TRIM55-202ENST00000315962 FAM193AP78312 1265 aa8.45□□□□□ -1.06
TRIM55-202ENST00000315962 TCP11X2Q5H9J9 407 aa8.45□□□□□ -1.06
TRIM55-202ENST00000315962 FAM83AQ86UY5 434 aa8.45□□□□□ -1.06
TRIM55-202ENST00000315962 RIN2Q8WYP3 895 aaPredicted RBP8.45□□□□□ -1.06
TRIM55-202ENST00000315962 GOLGA1Q92805 767 aa8.45□□□□□ -1.06
TRIM55-202ENST00000315962 CAPZA3Q96KX2 299 aa8.45□□□□□ -1.06
TRIM55-202ENST00000315962 PCMTD1Q96MG8 357 aaPredicted RBP8.45□□□□□ -1.06
TRIM55-202ENST00000315962 RAB34Q9BZG1 259 aa8.45□□□□□ -1.06
TRIM55-202ENST00000315962 WDR11Q9BZH6 1224 aa8.45□□□□□ -1.06
TRIM55-202ENST00000315962 BHMT2Q9H2M3 363 aa8.45□□□□□ -1.06
TRIM55-202ENST00000315962 RPAP3Q9H6T3 665 aaPredicted RBP8.45□□□□□ -1.06
TRIM55-202ENST00000315962 ABCB6Q9NP58 842 aa8.45□□□□□ -1.06
TRIM55-202ENST00000315962 KCND1Q9NSA2 647 aa8.45□□□□□ -1.06
TRIM55-202ENST00000315962 HDAC6Q9UBN7 1215 aa8.45□□□□□ -1.06
TRIM55-202ENST00000315962 ADD3Q9UEY8 706 aaKnown RBP8.45□□□□□ -1.06
TRIM55-202ENST00000315962 GCOM1H8Y6P7 765 aaPredicted RBP8.44□□□□□ -1.06
TRIM55-202ENST00000315962 hCG_1984214I3L0E3 225 aa8.44□□□□□ -1.06
TRIM55-202ENST00000315962 FZD9O00144 591 aa8.44□□□□□ -1.06
TRIM55-202ENST00000315962 SOCS7O14512 581 aa8.44□□□□□ -1.06
TRIM55-202ENST00000315962 PSMA7O14818 248 aa8.44□□□□□ -1.06
TRIM55-202ENST00000315962 SRGAP2O75044 1071 aa8.44□□□□□ -1.06
TRIM55-202ENST00000315962 POLR2MP0CAP2 368 aa8.44□□□□□ -1.06
TRIM55-202ENST00000315962 FXR2P51116 673 aaKnown RBP eCLIP8.44□□□□□ -1.06
TRIM55-202ENST00000315962 VSNL1P62760 191 aa8.44□□□□□ -1.06
TRIM55-202ENST00000315962 APBA1Q02410 837 aa8.44□□□□□ -1.06
TRIM55-202ENST00000315962 KCNA1Q09470 495 aa8.44□□□□□ -1.06
TRIM55-202ENST00000315962 HERC4Q5GLZ8 1057 aaPredicted RBP8.44□□□□□ -1.06
TRIM55-202ENST00000315962 GPBP1Q86WP2 473 aa8.44□□□□□ -1.06
TRIM55-202ENST00000315962 ZNF713Q8N859 430 aaPredicted RBP8.44□□□□□ -1.06
TRIM55-202ENST00000315962 NOA1Q8NC60 698 aaKnown RBP8.44□□□□□ -1.06
TRIM55-202ENST00000315962 GIMAP8Q8ND71 665 aaPredicted RBP8.44□□□□□ -1.06
TRIM55-202ENST00000315962 CHURC1Q8WUH1 139 aa8.44□□□□□ -1.06
TRIM55-202ENST00000315962 RAD54LQ92698 747 aa8.44□□□□□ -1.06
TRIM55-202ENST00000315962 ZBED3Q96IU2 234 aaPredicted RBP8.44□□□□□ -1.06
TRIM55-202ENST00000315962 SLF1Q9BQI6 1058 aa8.44□□□□□ -1.06
TRIM55-202ENST00000315962 SEMA6BQ9H3T3 888 aa8.44□□□□□ -1.06
TRIM55-202ENST00000315962 ANKZF1Q9H8Y5 726 aa8.44□□□□□ -1.06
TRIM55-202ENST00000315962 EMILIN3Q9NT22 766 aa8.44□□□□□ -1.06
TRIM55-202ENST00000315962 RMND1Q9NWS8 449 aa8.44□□□□□ -1.06
TRIM55-202ENST00000315962 RWDD2AQ9UIY3 292 aa8.44□□□□□ -1.06
TRIM55-202ENST00000315962 SAMM50Q9Y512 469 aa8.44□□□□□ -1.06
TRIM55-202ENST00000315962 ADM5C9JUS6 153 aa8.44□□□□□ -1.06
TRIM55-202ENST00000315962 RHOBTB3O94955 611 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms